Protein–RNA interactions for Protein: Q3USH5

Sfswap, Splicing factor, suppressor of white-apricot homolog, mousemouse

Known RBP Predictions only

Length 945 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SfswapQ3USH5 Gm12196-201ENSMUST00000120954 262 ntBASIC14.48□□□□□ -0.09
SfswapQ3USH5 Dusp13-204ENSMUST00000120984 976 ntAPPRIS ALT1 TSL 1 (best) BASIC14.48□□□□□ -0.09
SfswapQ3USH5 Retn-202ENSMUST00000169234 1139 ntAPPRIS P1 TSL 2 BASIC14.48□□□□□ -0.09
SfswapQ3USH5 Gm9630-201ENSMUST00000178304 885 ntBASIC14.48□□□□□ -0.09
SfswapQ3USH5 Gm5523-201ENSMUST00000180415 997 ntBASIC14.48□□□□□ -0.09
SfswapQ3USH5 D530033B14Rik-202ENSMUST00000206282 216 ntBASIC14.48□□□□□ -0.09
SfswapQ3USH5 Prss52-201ENSMUST00000022537 1064 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
SfswapQ3USH5 Cmtm2b-201ENSMUST00000041973 880 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
SfswapQ3USH5 1700001J03Rik-201ENSMUST00000073721 787 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
SfswapQ3USH5 Six4-202ENSMUST00000175693 6817 ntAPPRIS ALT2 TSL 5 BASIC14.48□□□□□ -0.09
SfswapQ3USH5 4732471J01Rik-204ENSMUST00000206436 2430 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
SfswapQ3USH5 Ebp-201ENSMUST00000033509 1743 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
SfswapQ3USH5 Ankrd61-201ENSMUST00000079624 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
SfswapQ3USH5 Gpr35-205ENSMUST00000186298 2647 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
SfswapQ3USH5 Ifnlr1-201ENSMUST00000074408 4182 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
SfswapQ3USH5 Gm853-201ENSMUST00000023884 2314 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
SfswapQ3USH5 A530072M11Rik-201ENSMUST00000151122 1852 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
SfswapQ3USH5 Chodl-202ENSMUST00000069148 2051 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
SfswapQ3USH5 Lef1-204ENSMUST00000106341 3357 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
SfswapQ3USH5 Lef1-202ENSMUST00000066849 3398 ntAPPRIS ALT1 TSL 5 BASIC14.48□□□□□ -0.09
SfswapQ3USH5 Cd34-201ENSMUST00000016638 2454 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
SfswapQ3USH5 Slc13a5-201ENSMUST00000021161 3329 ntAPPRIS P2 TSL 1 (best) BASIC14.48□□□□□ -0.09
SfswapQ3USH5 Fbxl12-203ENSMUST00000131128 4182 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
SfswapQ3USH5 Arhgap33-207ENSMUST00000208538 4372 ntAPPRIS P3 TSL 1 (best) BASIC14.48□□□□□ -0.09
SfswapQ3USH5 Bptf-203ENSMUST00000106763 12036 ntAPPRIS ALT2 TSL 5 BASIC14.48□□□□□ -0.09
SfswapQ3USH5 Hdgfl2-210ENSMUST00000225843 2238 ntAPPRIS ALT2 BASIC14.47□□□□□ -0.09
SfswapQ3USH5 Slc9b1-201ENSMUST00000078568 2248 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
SfswapQ3USH5 Sv2a-201ENSMUST00000035371 4334 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
SfswapQ3USH5 AC154671.1-201ENSMUST00000228617 1578 ntBASIC14.47□□□□□ -0.09
SfswapQ3USH5 Ptpn7-203ENSMUST00000187985 1990 ntAPPRIS P1 TSL 5 BASIC14.47□□□□□ -0.09
SfswapQ3USH5 Ccng2-202ENSMUST00000121127 2570 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
SfswapQ3USH5 Mtm1-203ENSMUST00000061970 3379 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
SfswapQ3USH5 Slc16a2-201ENSMUST00000042664 4152 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
SfswapQ3USH5 AC160405.1-201ENSMUST00000218207 1545 ntBASIC14.47□□□□□ -0.09
SfswapQ3USH5 Rassf8-201ENSMUST00000032388 1733 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
SfswapQ3USH5 Gjc1-202ENSMUST00000092567 1890 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
SfswapQ3USH5 Spert-204ENSMUST00000169658 1474 ntAPPRIS ALT2 TSL 3 BASIC14.47□□□□□ -0.09
SfswapQ3USH5 1700030J22Rik-202ENSMUST00000213068 1482 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
SfswapQ3USH5 Pex1-201ENSMUST00000006061 4433 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
SfswapQ3USH5 Prdx1-202ENSMUST00000106470 877 ntAPPRIS P1 TSL 5 BASIC14.47□□□□□ -0.09
SfswapQ3USH5 Gm11509-201ENSMUST00000117358 325 ntBASIC14.47□□□□□ -0.09
SfswapQ3USH5 Gm6335-201ENSMUST00000118081 1194 ntBASIC14.47□□□□□ -0.09
SfswapQ3USH5 Gm7816-201ENSMUST00000119884 1194 ntBASIC14.47□□□□□ -0.09
SfswapQ3USH5 Gm15542-201ENSMUST00000121585 1194 ntBASIC14.47□□□□□ -0.09
SfswapQ3USH5 Gm15884-201ENSMUST00000143765 643 ntTSL 3 BASIC14.47□□□□□ -0.09
SfswapQ3USH5 AA672651-201ENSMUST00000151550 489 ntTSL 2 BASIC14.47□□□□□ -0.09
SfswapQ3USH5 1700001G11Rik-203ENSMUST00000153646 764 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
SfswapQ3USH5 Mir1943-201ENSMUST00000158276 73 ntBASIC14.47□□□□□ -0.09
SfswapQ3USH5 Gm8546-201ENSMUST00000178288 1264 ntBASIC14.47□□□□□ -0.09
SfswapQ3USH5 Gm28686-201ENSMUST00000187404 609 ntBASIC14.47□□□□□ -0.09
SfswapQ3USH5 Gm3332-201ENSMUST00000189337 928 ntBASIC14.47□□□□□ -0.09
SfswapQ3USH5 Rbakdn-201ENSMUST00000198334 520 ntTSL 2 BASIC14.47□□□□□ -0.09
SfswapQ3USH5 Gm42682-201ENSMUST00000198349 1265 ntBASIC14.47□□□□□ -0.09
SfswapQ3USH5 Gm4157-201ENSMUST00000211647 679 ntBASIC14.47□□□□□ -0.09
SfswapQ3USH5 AC154276.3-201ENSMUST00000227643 998 ntBASIC14.47□□□□□ -0.09
SfswapQ3USH5 Chrnb2-201ENSMUST00000029562 6399 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
SfswapQ3USH5 Coro2b-201ENSMUST00000048043 3610 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
SfswapQ3USH5 Gsn-205ENSMUST00000201185 2607 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
SfswapQ3USH5 Rnf224-201ENSMUST00000091318 2021 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
SfswapQ3USH5 Asph-212ENSMUST00000108340 6646 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
SfswapQ3USH5 Efna1-202ENSMUST00000118587 1632 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
SfswapQ3USH5 Pcdhb1-201ENSMUST00000052366 2588 ntAPPRIS P1 BASIC14.47□□□□□ -0.09
SfswapQ3USH5 Rnf185-201ENSMUST00000064364 2906 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
SfswapQ3USH5 Cbl-206ENSMUST00000206147 3452 ntAPPRIS ALT2 TSL 5 BASIC14.47□□□□□ -0.09
SfswapQ3USH5 Hps3-201ENSMUST00000012580 4016 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
SfswapQ3USH5 Pcp4l1-201ENSMUST00000111332 1577 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
SfswapQ3USH5 Tpm3-rs7-201ENSMUST00000072359 2147 ntAPPRIS P1 BASIC14.47□□□□□ -0.09
SfswapQ3USH5 Fam13c-202ENSMUST00000105436 3380 ntAPPRIS ALT2 TSL 5 BASIC14.47□□□□□ -0.09
SfswapQ3USH5 C230034O21Rik-201ENSMUST00000153659 2836 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
SfswapQ3USH5 2610037D02Rik-201ENSMUST00000180852 2449 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
SfswapQ3USH5 Igf2r-201ENSMUST00000024599 8887 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
SfswapQ3USH5 Wscd1-201ENSMUST00000021168 2757 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
SfswapQ3USH5 Rbl1-201ENSMUST00000029170 4862 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
SfswapQ3USH5 Dner-201ENSMUST00000049126 3632 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
SfswapQ3USH5 Adh4-201ENSMUST00000013458 1314 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
SfswapQ3USH5 Palm-204ENSMUST00000218631 2725 ntTSL 2 BASIC14.46□□□□□ -0.09
SfswapQ3USH5 Mcm9-204ENSMUST00000219838 4132 ntTSL 5 BASIC14.46□□□□□ -0.09
SfswapQ3USH5 Sfxn3-203ENSMUST00000111954 2867 ntTSL 5 BASIC14.46□□□□□ -0.09
SfswapQ3USH5 M6pr-202ENSMUST00000112610 2539 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.09
SfswapQ3USH5 M6pr-201ENSMUST00000007602 2515 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
SfswapQ3USH5 Chrna9-201ENSMUST00000031108 1843 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
SfswapQ3USH5 Calu-202ENSMUST00000090481 2670 ntAPPRIS ALT1 TSL 1 (best) BASIC14.46□□□□□ -0.09
SfswapQ3USH5 Arhgef2-203ENSMUST00000170653 4238 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
SfswapQ3USH5 Eef1akmt2-202ENSMUST00000120425 573 ntTSL 3 BASIC14.46□□□□□ -0.09
SfswapQ3USH5 Gsto2-202ENSMUST00000120645 1277 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
SfswapQ3USH5 Mcfd2-205ENSMUST00000145895 751 ntTSL 2 BASIC14.46□□□□□ -0.09
SfswapQ3USH5 Gm16172-201ENSMUST00000156224 682 ntTSL 3 BASIC14.46□□□□□ -0.09
SfswapQ3USH5 Trmt112-204ENSMUST00000174786 646 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
SfswapQ3USH5 Glmp-208ENSMUST00000176519 447 ntTSL 5 BASIC14.46□□□□□ -0.09
SfswapQ3USH5 Zfp229-206ENSMUST00000183192 653 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
SfswapQ3USH5 Gm19353-201ENSMUST00000184561 445 ntBASIC14.46□□□□□ -0.09
SfswapQ3USH5 S100a3-205ENSMUST00000200508 587 ntAPPRIS P1 TSL 3 BASIC14.46□□□□□ -0.09
SfswapQ3USH5 Gm44711-201ENSMUST00000205414 1264 ntBASIC14.46□□□□□ -0.09
SfswapQ3USH5 Gm44934-201ENSMUST00000208941 238 ntTSL 5 BASIC14.46□□□□□ -0.09
SfswapQ3USH5 8030455M16Rik-201ENSMUST00000213014 902 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
SfswapQ3USH5 Il1f10-201ENSMUST00000058056 538 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
SfswapQ3USH5 Lcn6-201ENSMUST00000059693 1254 ntTSL 5 BASIC14.46□□□□□ -0.09
SfswapQ3USH5 Rpl17-201ENSMUST00000079716 775 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
SfswapQ3USH5 Irak2-202ENSMUST00000089022 2974 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
SfswapQ3USH5 Dync1li1-201ENSMUST00000047404 2601 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Retrieved 100 of 76,532 protein–RNA pairs in 40.8 ms