Protein–RNA interactions for Protein: Q3UHJ8

Rnf44, RING finger protein 44, mousemouse

Predictions only

Length 407 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf44Q3UHJ8 Kcna1-201ENSMUST00000055168 4031 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Rnf44Q3UHJ8 Cog6-201ENSMUST00000036665 3182 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Rnf44Q3UHJ8 Prkca-202ENSMUST00000100302 2265 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Rnf44Q3UHJ8 Prdm1-201ENSMUST00000039174 5281 ntAPPRIS ALT2 TSL 2 BASIC11.71□□□□□ -0.53
Rnf44Q3UHJ8 Pycr1-206ENSMUST00000170556 2914 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Rnf44Q3UHJ8 Acsm4-201ENSMUST00000047045 2152 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Rnf44Q3UHJ8 Rnf182-201ENSMUST00000059986 3544 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Rnf44Q3UHJ8 Kdelr1-205ENSMUST00000211716 1350 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Rnf44Q3UHJ8 Cux1-204ENSMUST00000175975 10945 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.53
Rnf44Q3UHJ8 H2-Q1-201ENSMUST00000073208 2024 ntAPPRIS P2 TSL 1 (best) BASIC11.71□□□□□ -0.53
Rnf44Q3UHJ8 Sde2-201ENSMUST00000038091 3213 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Rnf44Q3UHJ8 C130026I21Rik-202ENSMUST00000093506 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.53
Rnf44Q3UHJ8 Mir877-201ENSMUST00000104738 85 ntBASIC11.71□□□□□ -0.53
Rnf44Q3UHJ8 E130006D01Rik-203ENSMUST00000137398 906 ntTSL 2 BASIC11.71□□□□□ -0.53
Rnf44Q3UHJ8 C8g-201ENSMUST00000015227 822 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.53
Rnf44Q3UHJ8 Gm26361-201ENSMUST00000158868 186 ntBASIC11.71□□□□□ -0.53
Rnf44Q3UHJ8 Mymx-203ENSMUST00000178858 804 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.53
Rnf44Q3UHJ8 Hax1-205ENSMUST00000197767 1092 ntAPPRIS ALT2 TSL 5 BASIC11.71□□□□□ -0.53
Rnf44Q3UHJ8 1700011D18Rik-201ENSMUST00000205762 277 ntBASIC11.71□□□□□ -0.53
Rnf44Q3UHJ8 Caly-204ENSMUST00000211283 975 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Rnf44Q3UHJ8 Spata33-205ENSMUST00000212523 486 ntTSL 3 BASIC11.71□□□□□ -0.53
Rnf44Q3UHJ8 CT009713.10-202ENSMUST00000225734 696 ntBASIC11.71□□□□□ -0.53
Rnf44Q3UHJ8 Treml1-205ENSMUST00000225849 974 ntAPPRIS ALT2 BASIC11.71□□□□□ -0.53
Rnf44Q3UHJ8 BC049730-201ENSMUST00000051714 1172 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Rnf44Q3UHJ8 Txn2-201ENSMUST00000005487 1298 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Rnf44Q3UHJ8 Trim26-205ENSMUST00000130367 3187 ntAPPRIS P2 TSL 5 BASIC11.71□□□□□ -0.53
Rnf44Q3UHJ8 Ctdspl2-201ENSMUST00000036647 5053 ntAPPRIS P3 TSL 1 (best) BASIC11.71□□□□□ -0.53
Rnf44Q3UHJ8 Acin1-221ENSMUST00000150371 2494 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Rnf44Q3UHJ8 Gm12802-201ENSMUST00000145510 1813 ntTSL 1 (best) BASIC11.71□□□□□ -0.54
Rnf44Q3UHJ8 Trim9-209ENSMUST00000222316 3049 ntTSL 2 BASIC11.71□□□□□ -0.54
Rnf44Q3UHJ8 Zbtb7b-202ENSMUST00000107432 3639 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Rnf44Q3UHJ8 Cyb5rl-201ENSMUST00000030364 2360 ntTSL 1 (best) BASIC11.71□□□□□ -0.54
Rnf44Q3UHJ8 Fhdc1-202ENSMUST00000107689 5918 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Rnf44Q3UHJ8 CT009757.3-201ENSMUST00000223367 2320 ntBASIC11.71□□□□□ -0.54
Rnf44Q3UHJ8 Celf2-205ENSMUST00000114927 1721 ntAPPRIS ALT1 TSL 5 BASIC11.71□□□□□ -0.54
Rnf44Q3UHJ8 Rabif-201ENSMUST00000047978 2861 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Rnf44Q3UHJ8 Polrmt-201ENSMUST00000020580 3755 ntAPPRIS P2 TSL 1 (best) BASIC11.71□□□□□ -0.54
Rnf44Q3UHJ8 Ercc8-201ENSMUST00000054835 2111 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Rnf44Q3UHJ8 Krt31-201ENSMUST00000007318 1581 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Rnf44Q3UHJ8 4933427G23Rik-201ENSMUST00000122963 2515 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Rnf44Q3UHJ8 Gm16564-201ENSMUST00000162545 3010 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Rnf44Q3UHJ8 P2rx1-201ENSMUST00000021141 2486 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Rnf44Q3UHJ8 Armcx2-201ENSMUST00000035559 3384 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Rnf44Q3UHJ8 Epb41-207ENSMUST00000105975 5235 ntAPPRIS ALT2 TSL 5 BASIC11.7□□□□□ -0.54
Rnf44Q3UHJ8 Dram1-201ENSMUST00000020249 2807 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Rnf44Q3UHJ8 Prr36-201ENSMUST00000168386 4616 ntAPPRIS P1 TSL 5 BASIC11.7□□□□□ -0.54
Rnf44Q3UHJ8 4933411K16Rik-201ENSMUST00000164518 1380 ntAPPRIS P1 BASIC11.7□□□□□ -0.54
Rnf44Q3UHJ8 Pparg-204ENSMUST00000203732 1826 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Rnf44Q3UHJ8 Lhfpl1-201ENSMUST00000040084 1830 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Rnf44Q3UHJ8 Aff3-203ENSMUST00000095027 5857 ntAPPRIS P2 TSL 5 BASIC11.7□□□□□ -0.54
Rnf44Q3UHJ8 Entpd4-206ENSMUST00000184973 3589 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Rnf44Q3UHJ8 Entpd4b-204ENSMUST00000185072 3589 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Rnf44Q3UHJ8 Gm3139-202ENSMUST00000201138 1303 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Rnf44Q3UHJ8 Gm3183-203ENSMUST00000202911 1303 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Rnf44Q3UHJ8 Rmi1-201ENSMUST00000042450 3855 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Rnf44Q3UHJ8 Ap1g2-211ENSMUST00000170285 2596 ntAPPRIS P1 TSL 5 BASIC11.7□□□□□ -0.54
Rnf44Q3UHJ8 Mrps26-202ENSMUST00000145614 4278 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Rnf44Q3UHJ8 Rpl13-ps1-201ENSMUST00000121801 668 ntBASIC11.7□□□□□ -0.54
Rnf44Q3UHJ8 Uxt-202ENSMUST00000123836 875 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Rnf44Q3UHJ8 Immp2l-202ENSMUST00000132121 1147 ntAPPRIS P1 TSL 5 BASIC11.7□□□□□ -0.54
Rnf44Q3UHJ8 Gm44793-201ENSMUST00000136923 582 ntTSL 2 BASIC11.7□□□□□ -0.54
Rnf44Q3UHJ8 Rps28-202ENSMUST00000166693 271 ntAPPRIS P1 TSL 5 BASIC11.7□□□□□ -0.54
Rnf44Q3UHJ8 Rhoc-204ENSMUST00000176347 583 ntTSL 5 BASIC11.7□□□□□ -0.54
Rnf44Q3UHJ8 Ighv8-4-201ENSMUST00000178949 294 ntAPPRIS P1 BASIC11.7□□□□□ -0.54
Rnf44Q3UHJ8 Gm4819-201ENSMUST00000182170 1009 ntBASIC11.7□□□□□ -0.54
Rnf44Q3UHJ8 Aprt-ps-201ENSMUST00000212311 505 ntBASIC11.7□□□□□ -0.54
Rnf44Q3UHJ8 Cox5a-201ENSMUST00000000090 645 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Rnf44Q3UHJ8 Pik3r1-201ENSMUST00000035532 2923 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Rnf44Q3UHJ8 Rbm12b1-201ENSMUST00000050069 2949 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Rnf44Q3UHJ8 Myo18a-211ENSMUST00000130627 6202 ntAPPRIS ALT2 TSL 5 BASIC11.7□□□□□ -0.54
Rnf44Q3UHJ8 Csrnp2-201ENSMUST00000061457 4126 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Rnf44Q3UHJ8 4930554G24Rik-201ENSMUST00000126260 1603 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Rnf44Q3UHJ8 Irf8-201ENSMUST00000047737 2847 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Rnf44Q3UHJ8 Trmt1l-201ENSMUST00000065625 2749 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Rnf44Q3UHJ8 Sgk3-201ENSMUST00000097826 2728 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Rnf44Q3UHJ8 N4bp2l1-201ENSMUST00000016279 1905 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Rnf44Q3UHJ8 Tfe3-205ENSMUST00000115678 2658 ntTSL 5 BASIC11.7□□□□□ -0.54
Rnf44Q3UHJ8 Mapk8-204ENSMUST00000111944 1528 ntAPPRIS ALT1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Rnf44Q3UHJ8 Tubgcp3-201ENSMUST00000000776 3797 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Rnf44Q3UHJ8 Gm36970-201ENSMUST00000193688 1859 ntBASIC11.7□□□□□ -0.54
Rnf44Q3UHJ8 Capn3-203ENSMUST00000090028 2640 ntTSL 5 BASIC11.7□□□□□ -0.54
Rnf44Q3UHJ8 Spata13-207ENSMUST00000160973 7467 ntAPPRIS P3 TSL 1 (best) BASIC11.7□□□□□ -0.54
Rnf44Q3UHJ8 Add2-203ENSMUST00000203279 1454 ntTSL 2 BASIC11.7□□□□□ -0.54
Rnf44Q3UHJ8 Abo-202ENSMUST00000114045 1811 ntAPPRIS ALT2 TSL 5 BASIC11.7□□□□□ -0.54
Rnf44Q3UHJ8 Gnai3-201ENSMUST00000000001 3262 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Rnf44Q3UHJ8 Ocln-201ENSMUST00000022140 2839 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Rnf44Q3UHJ8 Drd1-201ENSMUST00000021932 3526 ntAPPRIS P2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Rnf44Q3UHJ8 Map3k11-201ENSMUST00000004156 3801 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Rnf44Q3UHJ8 BC052040-203ENSMUST00000166472 2770 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Rnf44Q3UHJ8 Gm10767-202ENSMUST00000168767 2067 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Rnf44Q3UHJ8 Dtnb-201ENSMUST00000077930 2376 ntAPPRIS P2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Rnf44Q3UHJ8 AL732309.1-201ENSMUST00000228627 2045 ntAPPRIS P1 BASIC11.69□□□□□ -0.54
Rnf44Q3UHJ8 Rangap1-202ENSMUST00000170134 3002 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Rnf44Q3UHJ8 Krt33a-201ENSMUST00000018399 1683 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Rnf44Q3UHJ8 Tmem19-206ENSMUST00000218731 1346 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Rnf44Q3UHJ8 Gabpb1-205ENSMUST00000110424 2613 ntAPPRIS P3 TSL 1 (best) BASIC11.69□□□□□ -0.54
Rnf44Q3UHJ8 Nfic-203ENSMUST00000105321 6237 ntAPPRIS ALT2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Rnf44Q3UHJ8 Afg3l1-201ENSMUST00000001520 4227 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Rnf44Q3UHJ8 Sp7-201ENSMUST00000078508 2906 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Rnf44Q3UHJ8 Krit1-201ENSMUST00000080085 2930 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Retrieved 100 of 76,532 protein–RNA pairs in 74.1 ms