Protein–RNA interactions for Protein: Q3U1D0

Lins1, Protein Lines homolog 1, mousemouse

Predictions only

Length 764 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lins1Q3U1D0 Fen1-203ENSMUST00000142241 2152 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Lins1Q3U1D0 Ccdc114-201ENSMUST00000038720 2460 ntAPPRIS P2 TSL 1 (best) BASIC14.46□□□□□ -0.1
Lins1Q3U1D0 Grk4-202ENSMUST00000074651 3234 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Lins1Q3U1D0 Camsap3-203ENSMUST00000207077 3832 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Lins1Q3U1D0 Adh4-201ENSMUST00000013458 1314 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Lins1Q3U1D0 Gm18227-201ENSMUST00000211082 1468 ntBASIC14.45□□□□□ -0.1
Lins1Q3U1D0 Gm11924-201ENSMUST00000152306 1750 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Lins1Q3U1D0 Ptpru-203ENSMUST00000105987 5484 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Lins1Q3U1D0 AC166574.4-201ENSMUST00000227165 1937 ntBASIC14.45□□□□□ -0.1
Lins1Q3U1D0 Asphd2-201ENSMUST00000031291 2678 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Lins1Q3U1D0 Gm23596-201ENSMUST00000104304 132 ntBASIC14.45□□□□□ -0.1
Lins1Q3U1D0 Gm12196-201ENSMUST00000120954 262 ntBASIC14.45□□□□□ -0.1
Lins1Q3U1D0 Gm12714-201ENSMUST00000143391 669 ntTSL 3 BASIC14.45□□□□□ -0.1
Lins1Q3U1D0 Gm17099-201ENSMUST00000166780 412 ntTSL 3 BASIC14.45□□□□□ -0.1
Lins1Q3U1D0 Gm27184-201ENSMUST00000185095 607 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Lins1Q3U1D0 Lysmd4-208ENSMUST00000208698 551 ntAPPRIS ALT2 TSL 2 BASIC14.45□□□□□ -0.1
Lins1Q3U1D0 Gm9826-201ENSMUST00000029124 1299 ntBASIC14.45□□□□□ -0.1
Lins1Q3U1D0 BC024139-201ENSMUST00000054022 2623 ntAPPRIS P2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Lins1Q3U1D0 Msh6-201ENSMUST00000005503 4254 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Lins1Q3U1D0 Il1f10-201ENSMUST00000058056 538 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Lins1Q3U1D0 Rph3al-201ENSMUST00000021208 1690 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Lins1Q3U1D0 Setdb2-205ENSMUST00000161459 2995 ntAPPRIS P2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Lins1Q3U1D0 Dnaic2-202ENSMUST00000092469 2799 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
Lins1Q3U1D0 Grid2ip-201ENSMUST00000010969 3459 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Lins1Q3U1D0 Zfp12-203ENSMUST00000077485 4294 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
Lins1Q3U1D0 Qpctl-201ENSMUST00000032566 2710 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Lins1Q3U1D0 Tmem56-204ENSMUST00000135818 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Lins1Q3U1D0 Gm45278-201ENSMUST00000209650 2414 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Lins1Q3U1D0 Foxred1-202ENSMUST00000127996 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Lins1Q3U1D0 Fxr1-204ENSMUST00000197694 2129 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
Lins1Q3U1D0 Fgf12-201ENSMUST00000100024 3065 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Lins1Q3U1D0 Lhx6-201ENSMUST00000112960 3345 ntAPPRIS P1 TSL 2 BASIC14.44□□□□□ -0.1
Lins1Q3U1D0 Fbxo41-202ENSMUST00000161078 6562 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Lins1Q3U1D0 Mir680-2-201ENSMUST00000102163 110 ntBASIC14.44□□□□□ -0.1
Lins1Q3U1D0 Gm23251-201ENSMUST00000103773 110 ntBASIC14.44□□□□□ -0.1
Lins1Q3U1D0 Gm14190-201ENSMUST00000105073 153 ntAPPRIS P1 BASIC14.44□□□□□ -0.1
Lins1Q3U1D0 Snx29-202ENSMUST00000115814 1125 ntTSL 5 BASIC14.44□□□□□ -0.1
Lins1Q3U1D0 Gm7851-201ENSMUST00000117574 323 ntBASIC14.44□□□□□ -0.1
Lins1Q3U1D0 Gm13461-201ENSMUST00000120980 662 ntBASIC14.44□□□□□ -0.1
Lins1Q3U1D0 1700001G11Rik-203ENSMUST00000153646 764 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Lins1Q3U1D0 Rprl1-201ENSMUST00000158050 327 ntBASIC14.44□□□□□ -0.1
Lins1Q3U1D0 Gm17334-201ENSMUST00000170390 907 ntAPPRIS P1 BASIC14.44□□□□□ -0.1
Lins1Q3U1D0 Smpd4-223ENSMUST00000172182 516 ntTSL 3 BASIC14.44□□□□□ -0.1
Lins1Q3U1D0 9030616G12Rik-201ENSMUST00000181142 644 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Lins1Q3U1D0 Gm29539-201ENSMUST00000188031 758 ntTSL 3 BASIC14.44□□□□□ -0.1
Lins1Q3U1D0 Gm5733-201ENSMUST00000190232 939 ntBASIC14.44□□□□□ -0.1
Lins1Q3U1D0 4833445I07Rik-202ENSMUST00000194104 579 ntTSL 3 BASIC14.44□□□□□ -0.1
Lins1Q3U1D0 Gm4482-201ENSMUST00000200876 742 ntBASIC14.44□□□□□ -0.1
Lins1Q3U1D0 Gm43050-202ENSMUST00000201152 651 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Lins1Q3U1D0 Gm10069-203ENSMUST00000204081 907 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Lins1Q3U1D0 Gm45021-201ENSMUST00000204521 369 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
Lins1Q3U1D0 Gm35060-201ENSMUST00000207669 825 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
Lins1Q3U1D0 1700128F08Rik-201ENSMUST00000034483 1110 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Lins1Q3U1D0 Cryab-201ENSMUST00000034562 946 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Lins1Q3U1D0 Gm26448-201ENSMUST00000082446 203 ntBASIC14.44□□□□□ -0.1
Lins1Q3U1D0 Styxl1-208ENSMUST00000178515 1651 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Lins1Q3U1D0 Oprm1-205ENSMUST00000078634 1695 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Lins1Q3U1D0 Fbxl12-201ENSMUST00000086458 2056 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Lins1Q3U1D0 C1qtnf9-201ENSMUST00000025940 1903 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Lins1Q3U1D0 C130026I21Rik-202ENSMUST00000093506 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Lins1Q3U1D0 Hdac5-202ENSMUST00000107150 3759 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Lins1Q3U1D0 Srr-203ENSMUST00000108448 3239 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
Lins1Q3U1D0 Gm28719-201ENSMUST00000187779 1757 ntBASIC14.44□□□□□ -0.1
Lins1Q3U1D0 Ccr4-202ENSMUST00000215425 1382 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Lins1Q3U1D0 Lig3-202ENSMUST00000080461 3056 ntTSL 5 BASIC14.44□□□□□ -0.1
Lins1Q3U1D0 Olfr648-202ENSMUST00000216612 2929 ntAPPRIS P1 TSL 2 BASIC14.44□□□□□ -0.1
Lins1Q3U1D0 Selenot-201ENSMUST00000107924 3157 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Lins1Q3U1D0 Mroh5-202ENSMUST00000110021 2145 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Lins1Q3U1D0 Phf24-201ENSMUST00000069184 6392 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Lins1Q3U1D0 Apopt1-203ENSMUST00000162316 3107 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Lins1Q3U1D0 Lzts3-201ENSMUST00000045761 4201 ntAPPRIS P3 TSL 5 BASIC14.43□□□□□ -0.1
Lins1Q3U1D0 Notch1-201ENSMUST00000028288 9488 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Lins1Q3U1D0 1520401A03Rik-205ENSMUST00000201734 2660 ntAPPRIS P5 TSL 5 BASIC14.43□□□□□ -0.1
Lins1Q3U1D0 Zfp1-203ENSMUST00000212072 1930 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Lins1Q3U1D0 Kcna10-201ENSMUST00000055064 1913 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Lins1Q3U1D0 Phyhd1-212ENSMUST00000154647 1678 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Lins1Q3U1D0 Zic4-204ENSMUST00000172646 2535 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
Lins1Q3U1D0 Slc2a4-203ENSMUST00000141837 1776 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Lins1Q3U1D0 Cyb561d1-201ENSMUST00000065664 4058 ntAPPRIS ALT1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Lins1Q3U1D0 Gm12501-201ENSMUST00000119163 529 ntBASIC14.43□□□□□ -0.1
Lins1Q3U1D0 Gm15432-201ENSMUST00000121106 195 ntBASIC14.43□□□□□ -0.1
Lins1Q3U1D0 Gm15906-201ENSMUST00000124746 323 ntTSL 5 BASIC14.43□□□□□ -0.1
Lins1Q3U1D0 Gm11379-201ENSMUST00000154678 381 ntTSL 3 BASIC14.43□□□□□ -0.1
Lins1Q3U1D0 Omt2a-203ENSMUST00000166056 1167 ntAPPRIS P4 TSL 1 (best) BASIC14.43□□□□□ -0.1
Lins1Q3U1D0 9330159M07Rik-202ENSMUST00000180783 1044 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Lins1Q3U1D0 Gm3332-201ENSMUST00000189337 928 ntBASIC14.43□□□□□ -0.1
Lins1Q3U1D0 Gm42817-201ENSMUST00000198962 607 ntTSL 3 BASIC14.43□□□□□ -0.1
Lins1Q3U1D0 4930504D19Rik-201ENSMUST00000204799 349 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Lins1Q3U1D0 AC153954.1-201ENSMUST00000216959 255 ntBASIC14.43□□□□□ -0.1
Lins1Q3U1D0 Csrp2-203ENSMUST00000219502 544 ntTSL 3 BASIC14.43□□□□□ -0.1
Lins1Q3U1D0 Cct2-206ENSMUST00000219573 637 ntTSL 3 BASIC14.43□□□□□ -0.1
Lins1Q3U1D0 Mir219a-1-201ENSMUST00000083621 110 ntBASIC14.43□□□□□ -0.1
Lins1Q3U1D0 Smarcb1-202ENSMUST00000121304 1622 ntAPPRIS ALT1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Lins1Q3U1D0 4930554G24Rik-201ENSMUST00000126260 1603 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Lins1Q3U1D0 B430119L08Rik-201ENSMUST00000130054 1994 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Lins1Q3U1D0 5430419D17Rik-201ENSMUST00000050586 2928 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Lins1Q3U1D0 Smarca4-204ENSMUST00000174008 5405 ntAPPRIS ALT1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Lins1Q3U1D0 Tbc1d4-209ENSMUST00000161991 6483 ntAPPRIS P2 TSL 5 BASIC14.43□□□□□ -0.1
Lins1Q3U1D0 Ndrg2-201ENSMUST00000004673 2099 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
Lins1Q3U1D0 Mpv17l-201ENSMUST00000023360 3087 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 39.1 ms