Protein–RNA interactions for Protein: Q3MI99

Ccbe1, Collagen and calcium-binding EGF domain-containing protein 1, mousemouse

Predictions only

Length 408 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccbe1Q3MI99 Slc9a3-203ENSMUST00000221703 5118 ntAPPRIS ALT2 TSL 5 BASIC11.04□□□□□ -0.64
Ccbe1Q3MI99 Impa1-202ENSMUST00000118410 2988 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Ccbe1Q3MI99 Gfm2-208ENSMUST00000161639 3157 ntAPPRIS P3 TSL 1 (best) BASIC11.04□□□□□ -0.64
Ccbe1Q3MI99 Gm8036-201ENSMUST00000118089 1718 ntBASIC11.04□□□□□ -0.64
Ccbe1Q3MI99 Wdr82-201ENSMUST00000020490 3747 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Ccbe1Q3MI99 Vps54-201ENSMUST00000006221 4323 ntAPPRIS P3 TSL 1 (best) BASIC11.03□□□□□ -0.64
Ccbe1Q3MI99 Lrtm2-204ENSMUST00000168793 3407 ntAPPRIS P1 TSL 5 BASIC11.03□□□□□ -0.64
Ccbe1Q3MI99 Gm26836-201ENSMUST00000181056 1568 ntTSL 5 BASIC11.03□□□□□ -0.64
Ccbe1Q3MI99 Napsa-201ENSMUST00000002274 1560 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Ccbe1Q3MI99 Prrc2b-202ENSMUST00000069817 10671 ntAPPRIS ALT2 TSL 1 (best) BASIC11.03□□□□□ -0.64
Ccbe1Q3MI99 Gm16958-201ENSMUST00000180603 1765 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Ccbe1Q3MI99 Nuak2-202ENSMUST00000082125 3107 ntAPPRIS P3 TSL 1 (best) BASIC11.03□□□□□ -0.64
Ccbe1Q3MI99 Pdik1l-203ENSMUST00000105877 4674 ntTSL 5 BASIC11.03□□□□□ -0.64
Ccbe1Q3MI99 Gm45089-201ENSMUST00000208082 2040 ntBASIC11.03□□□□□ -0.64
Ccbe1Q3MI99 Pip5k1a-204ENSMUST00000107232 3437 ntAPPRIS ALT2 TSL 5 BASIC11.03□□□□□ -0.64
Ccbe1Q3MI99 Gtf2a2-202ENSMUST00000118198 893 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Ccbe1Q3MI99 Gm15393-201ENSMUST00000120499 219 ntBASIC11.03□□□□□ -0.64
Ccbe1Q3MI99 Gm11400-201ENSMUST00000120853 1214 ntBASIC11.03□□□□□ -0.64
Ccbe1Q3MI99 Gm15199-201ENSMUST00000129933 542 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Ccbe1Q3MI99 Tbx3os1-203ENSMUST00000140101 490 ntTSL 3 BASIC11.03□□□□□ -0.64
Ccbe1Q3MI99 Tm7sf2-209ENSMUST00000161528 732 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Ccbe1Q3MI99 2410004P03Rik-203ENSMUST00000190691 953 ntTSL 2 BASIC11.03□□□□□ -0.64
Ccbe1Q3MI99 Smyd3-207ENSMUST00000194237 1047 ntTSL 2 BASIC11.03□□□□□ -0.64
Ccbe1Q3MI99 Tcta-203ENSMUST00000195615 597 ntTSL 5 BASIC11.03□□□□□ -0.64
Ccbe1Q3MI99 Mpv17-203ENSMUST00000200833 1171 ntTSL 5 BASIC11.03□□□□□ -0.64
Ccbe1Q3MI99 AC135669.1-201ENSMUST00000213585 412 ntBASIC11.03□□□□□ -0.64
Ccbe1Q3MI99 AC153937.4-201ENSMUST00000218479 661 ntTSL 3 BASIC11.03□□□□□ -0.64
Ccbe1Q3MI99 Cartpt-201ENSMUST00000022150 827 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Ccbe1Q3MI99 AC124732.1-201ENSMUST00000221551 910 ntBASIC11.03□□□□□ -0.64
Ccbe1Q3MI99 Cartpt-202ENSMUST00000224142 1238 ntAPPRIS P1 BASIC11.03□□□□□ -0.64
Ccbe1Q3MI99 Cav3-201ENSMUST00000075477 1157 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Ccbe1Q3MI99 Vmn1r217-201ENSMUST00000091721 897 ntAPPRIS P1 BASIC11.03□□□□□ -0.64
Ccbe1Q3MI99 Tmem107-202ENSMUST00000094081 1263 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Ccbe1Q3MI99 Bdh1-202ENSMUST00000115226 1496 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Ccbe1Q3MI99 Dnmt3l-201ENSMUST00000000746 1676 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Ccbe1Q3MI99 Tcn2-201ENSMUST00000020710 1897 ntAPPRIS P1 TSL 5 BASIC11.03□□□□□ -0.64
Ccbe1Q3MI99 Hcn1-201ENSMUST00000006991 14141 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Ccbe1Q3MI99 Gpm6b-201ENSMUST00000060210 2858 ntAPPRIS P3 TSL 1 (best) BASIC11.03□□□□□ -0.64
Ccbe1Q3MI99 Cdc14a-201ENSMUST00000090464 4485 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Ccbe1Q3MI99 Gm19967-201ENSMUST00000179676 2138 ntTSL 5 BASIC11.03□□□□□ -0.64
Ccbe1Q3MI99 Gm44415-201ENSMUST00000204151 2112 ntBASIC11.03□□□□□ -0.64
Ccbe1Q3MI99 Nicn1-201ENSMUST00000035227 2133 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Ccbe1Q3MI99 Mrvi1-202ENSMUST00000125758 5953 ntAPPRIS ALT2 TSL 2 BASIC11.03□□□□□ -0.64
Ccbe1Q3MI99 Kifc5c-ps-201ENSMUST00000179040 1530 ntBASIC11.03□□□□□ -0.64
Ccbe1Q3MI99 AC160405.1-201ENSMUST00000218207 1545 ntBASIC11.03□□□□□ -0.64
Ccbe1Q3MI99 7420426K07Rik-201ENSMUST00000098460 1504 ntAPPRIS P1 BASIC11.03□□□□□ -0.64
Ccbe1Q3MI99 Rimbp2-204ENSMUST00000198941 6446 ntAPPRIS P3 TSL 2 BASIC11.03□□□□□ -0.64
Ccbe1Q3MI99 Gm21939-201ENSMUST00000221137 2773 ntBASIC11.03□□□□□ -0.64
Ccbe1Q3MI99 H2-T24-201ENSMUST00000113760 2182 ntAPPRIS P1 TSL 2 BASIC11.03□□□□□ -0.64
Ccbe1Q3MI99 Nras-201ENSMUST00000029445 4470 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Ccbe1Q3MI99 Rassf4-201ENSMUST00000035842 6460 ntAPPRIS P2 TSL 1 (best) BASIC11.03□□□□□ -0.64
Ccbe1Q3MI99 Tube1-201ENSMUST00000019991 2929 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
Ccbe1Q3MI99 Abhd14b-207ENSMUST00000213179 1627 ntAPPRIS P1 TSL 2 BASIC11.02□□□□□ -0.64
Ccbe1Q3MI99 Nsd3-203ENSMUST00000136107 3818 ntTSL 1 (best) BASIC11.02□□□□□ -0.64
Ccbe1Q3MI99 Elfn1-201ENSMUST00000050519 3832 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
Ccbe1Q3MI99 Arhgef28-201ENSMUST00000109426 5387 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
Ccbe1Q3MI99 Mfsd13b-201ENSMUST00000033166 1883 ntAPPRIS P2 TSL 1 (best) BASIC11.02□□□□□ -0.64
Ccbe1Q3MI99 Ppp4r1-201ENSMUST00000073104 3850 ntAPPRIS P3 TSL 1 (best) BASIC11.02□□□□□ -0.64
Ccbe1Q3MI99 BC052040-203ENSMUST00000166472 2770 ntTSL 1 (best) BASIC11.02□□□□□ -0.64
Ccbe1Q3MI99 Col18a1-203ENSMUST00000105409 4791 ntAPPRIS P2 TSL 1 (best) BASIC11.02□□□□□ -0.64
Ccbe1Q3MI99 Clic4-201ENSMUST00000037099 4119 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
Ccbe1Q3MI99 Prss57-203ENSMUST00000169684 2841 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Ccbe1Q3MI99 Gtf2i-216ENSMUST00000173888 2820 ntTSL 5 BASIC11.02□□□□□ -0.65
Ccbe1Q3MI99 Gm20658-201ENSMUST00000175871 1489 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Ccbe1Q3MI99 Actc1-201ENSMUST00000090269 1473 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Ccbe1Q3MI99 Pofut1-201ENSMUST00000049863 5600 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Ccbe1Q3MI99 Gm26747-201ENSMUST00000180597 1716 ntTSL 5 BASIC11.02□□□□□ -0.65
Ccbe1Q3MI99 Ighv5-17-201ENSMUST00000103459 405 ntAPPRIS P1 BASIC11.02□□□□□ -0.65
Ccbe1Q3MI99 Hist3h2bb-ps-201ENSMUST00000117558 465 ntBASIC11.02□□□□□ -0.65
Ccbe1Q3MI99 Rpl9-202ENSMUST00000118543 1193 ntTSL 2 BASIC11.02□□□□□ -0.65
Ccbe1Q3MI99 Gm12201-201ENSMUST00000120657 1234 ntBASIC11.02□□□□□ -0.65
Ccbe1Q3MI99 D11Bhm181e-201ENSMUST00000122252 282 ntBASIC11.02□□□□□ -0.65
Ccbe1Q3MI99 Gm12264-201ENSMUST00000123949 500 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Ccbe1Q3MI99 Gm15201-201ENSMUST00000136472 1210 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Ccbe1Q3MI99 Ube2i-205ENSMUST00000172587 508 ntTSL 2 BASIC11.02□□□□□ -0.65
Ccbe1Q3MI99 Trp53tg5-201ENSMUST00000017864 934 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Ccbe1Q3MI99 Selenoh-205ENSMUST00000189636 499 ntAPPRIS ALT2 TSL 3 BASIC11.02□□□□□ -0.65
Ccbe1Q3MI99 Gm18766-201ENSMUST00000189811 808 ntBASIC11.02□□□□□ -0.65
Ccbe1Q3MI99 Fmc1-201ENSMUST00000019833 479 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Ccbe1Q3MI99 Rpl32-202ENSMUST00000203816 906 ntAPPRIS P1 TSL 2 BASIC11.02□□□□□ -0.65
Ccbe1Q3MI99 5430431A17Rik-201ENSMUST00000206342 795 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Ccbe1Q3MI99 AC090659.2-201ENSMUST00000225378 1186 ntBASIC11.02□□□□□ -0.65
Ccbe1Q3MI99 Gpatch2l-204ENSMUST00000221368 4355 ntAPPRIS P2 TSL 1 (best) BASIC11.02□□□□□ -0.65
Ccbe1Q3MI99 Fcrl1-203ENSMUST00000167200 1793 ntAPPRIS ALT2 TSL 1 (best) BASIC11.02□□□□□ -0.65
Ccbe1Q3MI99 Cfap77-204ENSMUST00000189711 1759 ntAPPRIS ALT2 TSL 5 BASIC11.02□□□□□ -0.65
Ccbe1Q3MI99 Abcb9-201ENSMUST00000031354 3661 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Ccbe1Q3MI99 Abcc10-201ENSMUST00000047970 4885 ntAPPRIS ALT2 TSL 1 (best) BASIC11.02□□□□□ -0.65
Ccbe1Q3MI99 Phactr1-201ENSMUST00000066928 2013 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Ccbe1Q3MI99 Elovl1-207ENSMUST00000167636 1340 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Ccbe1Q3MI99 Pitpnm2-201ENSMUST00000086123 6620 ntAPPRIS P3 TSL 1 (best) BASIC11.02□□□□□ -0.65
Ccbe1Q3MI99 H2-M2-201ENSMUST00000016427 1550 ntAPPRIS P3 TSL 1 (best) BASIC11.02□□□□□ -0.65
Ccbe1Q3MI99 Gm43221-201ENSMUST00000197612 2071 ntBASIC11.02□□□□□ -0.65
Ccbe1Q3MI99 Fam53b-207ENSMUST00000106169 4536 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Ccbe1Q3MI99 Ppm1l-201ENSMUST00000029355 9417 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Ccbe1Q3MI99 Gm45354-201ENSMUST00000199820 2557 ntBASIC11.02□□□□□ -0.65
Ccbe1Q3MI99 Gm45289-201ENSMUST00000211048 2577 ntBASIC11.02□□□□□ -0.65
Ccbe1Q3MI99 Lrba-206ENSMUST00000195524 3322 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Ccbe1Q3MI99 Rab8a-201ENSMUST00000003121 4550 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Ccbe1Q3MI99 Cyp4b1-201ENSMUST00000102707 1892 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Ccbe1Q3MI99 Ikbkg-204ENSMUST00000114128 1867 ntAPPRIS ALT2 TSL 2 BASIC11.02□□□□□ -0.65
Retrieved 100 of 76,532 protein–RNA pairs in 50.9 ms