Protein–RNA interactions for Protein: Q38HM4

Trim63, E3 ubiquitin-protein ligase TRIM63, mousemouse

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim63Q38HM4 AC130711.1-201ENSMUST00000224277 906 ntAPPRIS P1 BASIC9.95□□□□□ -0.82
Trim63Q38HM4 Klk14-201ENSMUST00000056329 1271 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Trim63Q38HM4 A330070K13Rik-201ENSMUST00000063656 633 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Trim63Q38HM4 1190007I07Rik-201ENSMUST00000079648 716 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Trim63Q38HM4 Mir125a-201ENSMUST00000083545 68 ntBASIC9.95□□□□□ -0.82
Trim63Q38HM4 Ppat-202ENSMUST00000140076 3981 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Trim63Q38HM4 Ciapin1-209ENSMUST00000162538 4359 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Trim63Q38HM4 Gm38089-201ENSMUST00000193585 1514 ntBASIC9.95□□□□□ -0.82
Trim63Q38HM4 Grk3-203ENSMUST00000197776 1570 ntTSL 1 (best) BASIC9.95□□□□□ -0.82
Trim63Q38HM4 Mael-202ENSMUST00000194057 1691 ntTSL 5 BASIC9.95□□□□□ -0.82
Trim63Q38HM4 Olfr160-203ENSMUST00000215727 1667 ntAPPRIS P1 TSL 5 BASIC9.95□□□□□ -0.82
Trim63Q38HM4 Dnmt3l-201ENSMUST00000000746 1676 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Trim63Q38HM4 Smarcb1-201ENSMUST00000000925 1660 ntAPPRIS P3 TSL 1 (best) BASIC9.95□□□□□ -0.82
Trim63Q38HM4 Cflar-202ENSMUST00000097722 1771 ntAPPRIS ALT2 TSL 5 BASIC9.95□□□□□ -0.82
Trim63Q38HM4 Gm42031-201ENSMUST00000209823 1885 ntTSL 5 BASIC9.95□□□□□ -0.82
Trim63Q38HM4 Marco-201ENSMUST00000027639 1925 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Trim63Q38HM4 Olfr130-202ENSMUST00000215726 5810 ntAPPRIS P1 TSL 5 BASIC9.95□□□□□ -0.82
Trim63Q38HM4 Pipox-201ENSMUST00000017597 1998 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Trim63Q38HM4 Grb10-202ENSMUST00000109653 2048 ntTSL 5 BASIC9.95□□□□□ -0.82
Trim63Q38HM4 Adamdec1-201ENSMUST00000022641 2442 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Trim63Q38HM4 Tifa-205ENSMUST00000171621 2547 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Trim63Q38HM4 Lrrc61-201ENSMUST00000101436 2674 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Trim63Q38HM4 Aldh3a2-201ENSMUST00000066277 2892 ntTSL 2 BASIC9.95□□□□□ -0.82
Trim63Q38HM4 Kalrn-203ENSMUST00000114947 2922 ntTSL 5 BASIC9.95□□□□□ -0.82
Trim63Q38HM4 4930431P19Rik-202ENSMUST00000207761 2959 ntBASIC9.95□□□□□ -0.82
Trim63Q38HM4 Gm42669-202ENSMUST00000160160 3080 ntAPPRIS P1 TSL 2 BASIC9.95□□□□□ -0.82
Trim63Q38HM4 Ptcd1-201ENSMUST00000031628 3087 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Trim63Q38HM4 Pls3-201ENSMUST00000033547 3242 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Trim63Q38HM4 Robo4-203ENSMUST00000115048 3392 ntTSL 1 (best) BASIC9.95□□□□□ -0.82
Trim63Q38HM4 Gm13652-201ENSMUST00000143898 3412 ntTSL 1 (best) BASIC9.95□□□□□ -0.82
Trim63Q38HM4 Krba1-201ENSMUST00000031815 3685 ntTSL 1 (best) BASIC9.95□□□□□ -0.82
Trim63Q38HM4 Amz1-202ENSMUST00000120630 4037 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Trim63Q38HM4 Phtf1os-201ENSMUST00000160110 4046 ntBASIC9.95□□□□□ -0.82
Trim63Q38HM4 Rrp7a-201ENSMUST00000018184 4363 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Trim63Q38HM4 Cdkl5-205ENSMUST00000198931 9796 ntAPPRIS ALT2 TSL 5 BASIC9.95□□□□□ -0.82
Trim63Q38HM4 4632411P08Rik-201ENSMUST00000181005 3237 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
Trim63Q38HM4 Poldip3-202ENSMUST00000100375 3157 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
Trim63Q38HM4 Pxylp1-201ENSMUST00000078478 2908 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Trim63Q38HM4 Ppp4r1l-ps-202ENSMUST00000132669 2767 ntBASIC9.94□□□□□ -0.82
Trim63Q38HM4 Zc3h12a-201ENSMUST00000036188 2755 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Trim63Q38HM4 Ldb2-204ENSMUST00000199256 2596 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
Trim63Q38HM4 Gm28268-201ENSMUST00000188966 2528 ntTSL 5 BASIC9.94□□□□□ -0.82
Trim63Q38HM4 Mylk3-202ENSMUST00000121972 2407 ntAPPRIS ALT2 TSL 1 (best) BASIC9.94□□□□□ -0.82
Trim63Q38HM4 Gm37785-201ENSMUST00000195783 2408 ntBASIC9.94□□□□□ -0.82
Trim63Q38HM4 Gm45635-201ENSMUST00000211516 2134 ntBASIC9.94□□□□□ -0.82
Trim63Q38HM4 Tmc3-201ENSMUST00000039317 6221 ntAPPRIS P2 TSL 1 (best) BASIC9.94□□□□□ -0.82
Trim63Q38HM4 Th-202ENSMUST00000105929 1950 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
Trim63Q38HM4 Gm37084-201ENSMUST00000191688 5898 ntBASIC9.94□□□□□ -0.82
Trim63Q38HM4 Nsd3-210ENSMUST00000153597 1865 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
Trim63Q38HM4 Gm43858-201ENSMUST00000199418 1778 ntBASIC9.94□□□□□ -0.82
Trim63Q38HM4 Sh3glb2-202ENSMUST00000100215 1749 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
Trim63Q38HM4 Abhd14b-207ENSMUST00000213179 1627 ntAPPRIS P1 TSL 2 BASIC9.94□□□□□ -0.82
Trim63Q38HM4 Gm9946-202ENSMUST00000162741 1580 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
Trim63Q38HM4 Asic3-202ENSMUST00000196296 1593 ntAPPRIS P1 TSL 5 BASIC9.94□□□□□ -0.82
Trim63Q38HM4 Gm13859-201ENSMUST00000119936 1423 ntBASIC9.94□□□□□ -0.82
Trim63Q38HM4 Gm45667-201ENSMUST00000210380 1316 ntBASIC9.94□□□□□ -0.82
Trim63Q38HM4 Cox16-202ENSMUST00000110340 668 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
Trim63Q38HM4 Slc39a1-ps-201ENSMUST00000120862 969 ntBASIC9.94□□□□□ -0.82
Trim63Q38HM4 Prss41-202ENSMUST00000122936 1088 ntAPPRIS ALT2 TSL 1 (best) BASIC9.94□□□□□ -0.82
Trim63Q38HM4 Gm14966-202ENSMUST00000129675 649 ntTSL 2 BASIC9.94□□□□□ -0.82
Trim63Q38HM4 Gm11682-201ENSMUST00000144689 516 ntTSL 3 BASIC9.94□□□□□ -0.82
Trim63Q38HM4 Tppp3-201ENSMUST00000014990 1127 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Trim63Q38HM4 Med22-201ENSMUST00000015920 973 ntAPPRIS P4 TSL 2 BASIC9.94□□□□□ -0.82
Trim63Q38HM4 Gm17409-201ENSMUST00000167423 962 ntAPPRIS P1 BASIC9.94□□□□□ -0.82
Trim63Q38HM4 Gm27301-201ENSMUST00000184012 127 ntBASIC9.94□□□□□ -0.82
Trim63Q38HM4 Gm21362-201ENSMUST00000194272 928 ntBASIC9.94□□□□□ -0.82
Trim63Q38HM4 Ighv8-7-201ENSMUST00000194349 297 ntBASIC9.94□□□□□ -0.82
Trim63Q38HM4 Thap2-203ENSMUST00000218989 527 ntBASIC9.94□□□□□ -0.82
Trim63Q38HM4 Prss41-201ENSMUST00000024926 1128 ntAPPRIS P2 TSL 1 (best) BASIC9.94□□□□□ -0.82
Trim63Q38HM4 Guca2b-201ENSMUST00000044426 605 ntAPPRIS P2 TSL 1 (best) BASIC9.94□□□□□ -0.82
Trim63Q38HM4 Nsf-202ENSMUST00000103075 3766 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Trim63Q38HM4 Gm10417-201ENSMUST00000194341 3522 ntBASIC9.94□□□□□ -0.82
Trim63Q38HM4 Inpp5j-201ENSMUST00000044507 3370 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Trim63Q38HM4 Cdc42ep4-201ENSMUST00000053536 3008 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Trim63Q38HM4 Pom121l2-201ENSMUST00000017126 2960 ntAPPRIS P4 BASIC9.94□□□□□ -0.82
Trim63Q38HM4 Flad1-204ENSMUST00000129308 2892 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Trim63Q38HM4 Siglecg-201ENSMUST00000005592 2569 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Trim63Q38HM4 Stard13-201ENSMUST00000062015 5526 ntAPPRIS ALT2 TSL 1 (best) BASIC9.94□□□□□ -0.82
Trim63Q38HM4 Bbs12-202ENSMUST00000108121 2348 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
Trim63Q38HM4 A430033K04Rik-203ENSMUST00000198958 2264 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
Trim63Q38HM4 Kif1a-204ENSMUST00000171796 8206 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
Trim63Q38HM4 Tubb4a-201ENSMUST00000071135 2228 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Trim63Q38HM4 Prorsd1-202ENSMUST00000133103 2126 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
Trim63Q38HM4 Brat1-201ENSMUST00000041588 3333 ntAPPRIS P3 TSL 1 (best) BASIC9.94□□□□□ -0.82
Trim63Q38HM4 Ing1-204ENSMUST00000210041 1881 ntTSL 5 BASIC9.93□□□□□ -0.82
Trim63Q38HM4 Gm16976-201ENSMUST00000099718 1894 ntTSL 5 BASIC9.93□□□□□ -0.82
Trim63Q38HM4 Sik2-206ENSMUST00000176824 5369 ntAPPRIS ALT2 TSL 5 BASIC9.93□□□□□ -0.82
Trim63Q38HM4 Itgad-201ENSMUST00000033051 3965 ntAPPRIS P2 TSL 1 (best) BASIC9.93□□□□□ -0.82
Trim63Q38HM4 Zfhx3-201ENSMUST00000043896 16433 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Trim63Q38HM4 Gm38157-201ENSMUST00000194178 1698 ntBASIC9.93□□□□□ -0.82
Trim63Q38HM4 Slc9a3r2-202ENSMUST00000019684 1688 ntTSL 1 (best) BASIC9.93□□□□□ -0.82
Trim63Q38HM4 Dhcr7-211ENSMUST00000207143 1652 ntAPPRIS ALT2 TSL 5 BASIC9.93□□□□□ -0.82
Trim63Q38HM4 Dusp10-201ENSMUST00000048655 2792 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Trim63Q38HM4 Wipf2-201ENSMUST00000037480 7011 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Trim63Q38HM4 Stat5a-202ENSMUST00000107356 3738 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Trim63Q38HM4 Chchd3-201ENSMUST00000066379 1550 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Trim63Q38HM4 Gm12799-201ENSMUST00000118151 2560 ntBASIC9.93□□□□□ -0.82
Trim63Q38HM4 Ndufs1-203ENSMUST00000168099 2590 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Trim63Q38HM4 Ncf2-201ENSMUST00000027754 2596 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Trim63Q38HM4 Ldb3-202ENSMUST00000022328 2468 ntAPPRIS ALT2 TSL 1 (best) BASIC9.93□□□□□ -0.82
Retrieved 100 of 76,532 protein–RNA pairs in 72.2 ms