Protein–RNA interactions for Protein: Q2QI47

Ush2A, Usherin, mousemouse

Predictions only

Length 5,193 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ush2AQ2QI47 Dmrtc1a-202ENSMUST00000119624 1149 ntAPPRIS ALT2 TSL 5 BASIC6.2□□□□□ -1.42
Ush2AQ2QI47 Hyal1-203ENSMUST00000123005 843 ntTSL 3 BASIC6.2□□□□□ -1.42
Ush2AQ2QI47 1700026D11Rik-205ENSMUST00000151417 789 ntTSL 3 BASIC6.2□□□□□ -1.42
Ush2AQ2QI47 Gm10807-201ENSMUST00000177134 795 ntBASIC6.2□□□□□ -1.42
Ush2AQ2QI47 Gm26943-201ENSMUST00000182295 957 ntBASIC6.2□□□□□ -1.42
Ush2AQ2QI47 Gm18014-201ENSMUST00000183369 817 ntBASIC6.2□□□□□ -1.42
Ush2AQ2QI47 Gm21149-201ENSMUST00000197995 1212 ntAPPRIS P1 TSL 5 BASIC6.2□□□□□ -1.42
Ush2AQ2QI47 Hsd17b3-201ENSMUST00000039832 1131 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
Ush2AQ2QI47 Olfr411-201ENSMUST00000080365 1049 ntAPPRIS P1 BASIC6.2□□□□□ -1.42
Ush2AQ2QI47 Trmt10c-201ENSMUST00000059052 3002 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
Ush2AQ2QI47 Zfp112-204ENSMUST00000215113 2628 ntAPPRIS ALT2 TSL 5 BASIC6.2□□□□□ -1.42
Ush2AQ2QI47 Gm15850-201ENSMUST00000134998 2049 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
Ush2AQ2QI47 Cadm2-203ENSMUST00000120898 2768 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
Ush2AQ2QI47 Arhgef10l-201ENSMUST00000039204 4493 ntAPPRIS P4 TSL 1 (best) BASIC6.2□□□□□ -1.42
Ush2AQ2QI47 Usp2-208ENSMUST00000177054 2370 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
Ush2AQ2QI47 Hemk1-201ENSMUST00000035196 2192 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
Ush2AQ2QI47 Tor1aip2-207ENSMUST00000128941 2925 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
Ush2AQ2QI47 Micu1-201ENSMUST00000020311 2336 ntTSL 5 BASIC6.2□□□□□ -1.42
Ush2AQ2QI47 Gm853-201ENSMUST00000023884 2314 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
Ush2AQ2QI47 Tnk1-203ENSMUST00000108628 2450 ntAPPRIS ALT2 TSL 5 BASIC6.2□□□□□ -1.42
Ush2AQ2QI47 Gm14853-201ENSMUST00000116081 549 ntBASIC6.2□□□□□ -1.42
Ush2AQ2QI47 Gm15539-201ENSMUST00000118452 566 ntBASIC6.2□□□□□ -1.42
Ush2AQ2QI47 Gm13758-201ENSMUST00000118699 743 ntBASIC6.2□□□□□ -1.42
Ush2AQ2QI47 9230111E07Rik-201ENSMUST00000124850 811 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
Ush2AQ2QI47 Gm3355-201ENSMUST00000160079 487 ntBASIC6.2□□□□□ -1.42
Ush2AQ2QI47 Rab26-204ENSMUST00000176533 965 ntAPPRIS ALT2 TSL 5 BASIC6.2□□□□□ -1.42
Ush2AQ2QI47 Fam240a-201ENSMUST00000177678 499 ntAPPRIS P1 TSL 2 BASIC6.2□□□□□ -1.42
Ush2AQ2QI47 Ighv1-33-201ENSMUST00000193220 350 ntBASIC6.2□□□□□ -1.42
Ush2AQ2QI47 AC165249.1-202ENSMUST00000217990 734 ntTSL 3 BASIC6.2□□□□□ -1.42
Ush2AQ2QI47 AC165260.2-201ENSMUST00000225371 395 ntBASIC6.2□□□□□ -1.42
Ush2AQ2QI47 Gm28653-202ENSMUST00000227082 521 ntBASIC6.2□□□□□ -1.42
Ush2AQ2QI47 Gm9790-201ENSMUST00000054148 288 ntBASIC6.2□□□□□ -1.42
Ush2AQ2QI47 AC122314.1-201ENSMUST00000223056 2239 ntBASIC6.2□□□□□ -1.42
Ush2AQ2QI47 Tmc6-201ENSMUST00000026659 2865 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
Ush2AQ2QI47 D330025C20Rik-201ENSMUST00000191632 3046 ntBASIC6.2□□□□□ -1.42
Ush2AQ2QI47 Gins3-201ENSMUST00000034094 2519 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
Ush2AQ2QI47 Sox5-202ENSMUST00000077160 2526 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
Ush2AQ2QI47 Armcx6-201ENSMUST00000052431 2024 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
Ush2AQ2QI47 Lrrfip1-202ENSMUST00000068167 2849 ntAPPRIS ALT2 TSL 5 BASIC6.2□□□□□ -1.42
Ush2AQ2QI47 4933438K21Rik-201ENSMUST00000175787 1693 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
Ush2AQ2QI47 Dusp6-201ENSMUST00000020118 2796 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
Ush2AQ2QI47 Spock3-203ENSMUST00000118003 2860 ntAPPRIS P3 TSL 5 BASIC6.2□□□□□ -1.42
Ush2AQ2QI47 A530053M12Rik-201ENSMUST00000187918 1467 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
Ush2AQ2QI47 Prss36-202ENSMUST00000118755 3028 ntAPPRIS P2 TSL 5 BASIC6.2□□□□□ -1.42
Ush2AQ2QI47 AC126262.1-201ENSMUST00000221802 1904 ntBASIC6.2□□□□□ -1.42
Ush2AQ2QI47 Lmod3-201ENSMUST00000095655 2215 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
Ush2AQ2QI47 Jph4-201ENSMUST00000022819 4489 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
Ush2AQ2QI47 Gm5529-201ENSMUST00000165691 891 ntBASIC6.2□□□□□ -1.42
Ush2AQ2QI47 Gm28746-201ENSMUST00000187453 380 ntBASIC6.2□□□□□ -1.42
Ush2AQ2QI47 Abracl-201ENSMUST00000020002 846 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
Ush2AQ2QI47 Gm9273-201ENSMUST00000200606 715 ntBASIC6.2□□□□□ -1.42
Ush2AQ2QI47 Gm43122-202ENSMUST00000202259 526 ntTSL 2 BASIC6.2□□□□□ -1.42
Ush2AQ2QI47 AC123698.1-201ENSMUST00000227090 402 ntBASIC6.2□□□□□ -1.42
Ush2AQ2QI47 Dnm2-201ENSMUST00000072362 3502 ntAPPRIS ALT2 TSL 1 (best) BASIC6.2□□□□□ -1.42
Ush2AQ2QI47 Scap-201ENSMUST00000098350 4227 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
Ush2AQ2QI47 Pls1-201ENSMUST00000093800 3704 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
Ush2AQ2QI47 Gm13111-201ENSMUST00000136217 3542 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
Ush2AQ2QI47 Cdadc1-202ENSMUST00000056997 2202 ntAPPRIS P3 TSL 1 (best) BASIC6.2□□□□□ -1.42
Ush2AQ2QI47 Prr27-202ENSMUST00000101056 1337 ntAPPRIS ALT2 TSL 1 (best) BASIC6.2□□□□□ -1.42
Ush2AQ2QI47 Prr27-201ENSMUST00000002310 1313 ntAPPRIS P3 TSL 1 (best) BASIC6.2□□□□□ -1.42
Ush2AQ2QI47 Gpc2-205ENSMUST00000161827 2586 ntAPPRIS P2 TSL 1 (best) BASIC6.2□□□□□ -1.42
Ush2AQ2QI47 Rdh19-201ENSMUST00000077530 1889 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
Ush2AQ2QI47 Ccl6-201ENSMUST00000019071 1440 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
Ush2AQ2QI47 Gm42928-201ENSMUST00000197338 3339 ntBASIC6.2□□□□□ -1.42
Ush2AQ2QI47 Il1rn-202ENSMUST00000114485 728 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
Ush2AQ2QI47 Gm12028-201ENSMUST00000118065 436 ntBASIC6.2□□□□□ -1.42
Ush2AQ2QI47 1700021P04Rik-201ENSMUST00000178667 659 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
Ush2AQ2QI47 Gm23694-201ENSMUST00000179335 110 ntBASIC6.2□□□□□ -1.42
Ush2AQ2QI47 Gm25947-201ENSMUST00000180343 110 ntBASIC6.2□□□□□ -1.42
Ush2AQ2QI47 9530034A14Rik-201ENSMUST00000197919 1083 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
Ush2AQ2QI47 4933439N14Rik-201ENSMUST00000211062 1087 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
Ush2AQ2QI47 Gm40723-201ENSMUST00000219407 603 ntTSL 3 BASIC6.2□□□□□ -1.42
Ush2AQ2QI47 AC133517.1-201ENSMUST00000225825 594 ntBASIC6.2□□□□□ -1.42
Ush2AQ2QI47 AC154760.1-201ENSMUST00000227218 673 ntBASIC6.2□□□□□ -1.42
Ush2AQ2QI47 Uqcc1-201ENSMUST00000006036 808 ntTSL 5 BASIC6.2□□□□□ -1.42
Ush2AQ2QI47 Olfr533-201ENSMUST00000071755 1052 ntAPPRIS P1 BASIC6.2□□□□□ -1.42
Ush2AQ2QI47 Cep70-207ENSMUST00000190715 1768 ntAPPRIS ALT2 TSL 1 (best) BASIC6.2□□□□□ -1.42
Ush2AQ2QI47 Dpm1-209ENSMUST00000154111 2293 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
Ush2AQ2QI47 Gm44740-201ENSMUST00000205603 1614 ntBASIC6.2□□□□□ -1.42
Ush2AQ2QI47 9530059O14Rik-204ENSMUST00000215759 1606 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
Ush2AQ2QI47 Scara3-201ENSMUST00000042046 3597 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
Ush2AQ2QI47 Ufd1-201ENSMUST00000005394 1996 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
Ush2AQ2QI47 Ube3a-216ENSMUST00000202945 3889 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
Ush2AQ2QI47 Gm26513-201ENSMUST00000181802 2489 ntBASIC6.2□□□□□ -1.42
Ush2AQ2QI47 Gm15459-201ENSMUST00000117405 1941 ntBASIC6.19□□□□□ -1.42
Ush2AQ2QI47 Gm8355-201ENSMUST00000177767 1941 ntBASIC6.19□□□□□ -1.42
Ush2AQ2QI47 Fcrl1-206ENSMUST00000194786 1540 ntAPPRIS ALT2 TSL 1 (best) BASIC6.19□□□□□ -1.42
Ush2AQ2QI47 Map2k7-206ENSMUST00000110998 3497 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
Ush2AQ2QI47 Ppp1r2-ps4-201ENSMUST00000112182 633 ntBASIC6.19□□□□□ -1.42
Ush2AQ2QI47 Gm8577-201ENSMUST00000122420 986 ntBASIC6.19□□□□□ -1.42
Ush2AQ2QI47 Gm17764-201ENSMUST00000185925 391 ntBASIC6.19□□□□□ -1.42
Ush2AQ2QI47 1700109G14Rik-202ENSMUST00000188538 754 ntTSL 3 BASIC6.19□□□□□ -1.42
Ush2AQ2QI47 Gm18299-201ENSMUST00000192026 636 ntBASIC6.19□□□□□ -1.42
Ush2AQ2QI47 Crip1-205ENSMUST00000199089 509 ntTSL 3 BASIC6.19□□□□□ -1.42
Ush2AQ2QI47 Gm44711-201ENSMUST00000205414 1264 ntBASIC6.19□□□□□ -1.42
Ush2AQ2QI47 Gm45258-201ENSMUST00000210042 853 ntBASIC6.19□□□□□ -1.42
Ush2AQ2QI47 Gm9619-201ENSMUST00000211587 762 ntBASIC6.19□□□□□ -1.42
Ush2AQ2QI47 Gm9102-201ENSMUST00000219250 465 ntBASIC6.19□□□□□ -1.42
Ush2AQ2QI47 AC129931.1-201ENSMUST00000228865 1861 ntBASIC6.19□□□□□ -1.42
Ush2AQ2QI47 Dlg3-202ENSMUST00000087984 4956 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
Retrieved 100 of 76,532 protein–RNA pairs in 75.8 ms