Protein–RNA interactions for Protein: Q2MKA5

Chrna5, Neuronal acetylcholine receptor subunit alpha-5, mousemouse

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chrna5Q2MKA5 Aatk-201ENSMUST00000064307 5336 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Chrna5Q2MKA5 Otop1-201ENSMUST00000063136 3106 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
Chrna5Q2MKA5 Ddx10-201ENSMUST00000065630 3128 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Chrna5Q2MKA5 Jade1-204ENSMUST00000170711 2896 ntTSL 5 BASIC14.38□□□□□ -0.11
Chrna5Q2MKA5 Riox2-206ENSMUST00000160571 2244 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Chrna5Q2MKA5 Kcnc2-204ENSMUST00000219301 2944 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Chrna5Q2MKA5 Ythdf2-203ENSMUST00000152796 4129 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Chrna5Q2MKA5 AC238940.1-201ENSMUST00000225106 1858 ntBASIC14.38□□□□□ -0.11
Chrna5Q2MKA5 Agt-201ENSMUST00000063278 1891 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Chrna5Q2MKA5 4732471J01Rik-204ENSMUST00000206436 2430 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Chrna5Q2MKA5 Cdk11b-201ENSMUST00000067081 2595 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
Chrna5Q2MKA5 Cfap52-201ENSMUST00000021287 2199 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Chrna5Q2MKA5 AC241621.2-201ENSMUST00000223991 2151 ntBASIC14.37□□□□□ -0.11
Chrna5Q2MKA5 Ip6k3-201ENSMUST00000025046 2307 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Chrna5Q2MKA5 Fbxo41-202ENSMUST00000161078 6562 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Chrna5Q2MKA5 Tub-202ENSMUST00000119474 2097 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Chrna5Q2MKA5 Fam198a-202ENSMUST00000213773 2088 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Chrna5Q2MKA5 Gm26732-201ENSMUST00000181807 2771 ntTSL 5 BASIC14.37□□□□□ -0.11
Chrna5Q2MKA5 Zfp61-208ENSMUST00000165241 1668 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
Chrna5Q2MKA5 Evc2-201ENSMUST00000056365 4091 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Chrna5Q2MKA5 Ap2a1-204ENSMUST00000167930 3376 ntTSL 5 BASIC14.37□□□□□ -0.11
Chrna5Q2MKA5 Vmn1r65-201ENSMUST00000086338 2682 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Chrna5Q2MKA5 Prrt3-204ENSMUST00000205075 1956 ntAPPRIS ALT2 TSL 2 BASIC14.37□□□□□ -0.11
Chrna5Q2MKA5 Tcea3-201ENSMUST00000102533 1251 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Chrna5Q2MKA5 Gm14219-201ENSMUST00000120414 288 ntBASIC14.37□□□□□ -0.11
Chrna5Q2MKA5 Gm5706-201ENSMUST00000181525 993 ntBASIC14.37□□□□□ -0.11
Chrna5Q2MKA5 Gm27232-201ENSMUST00000184373 597 ntTSL 3 BASIC14.37□□□□□ -0.11
Chrna5Q2MKA5 Ccl4-201ENSMUST00000019074 660 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Chrna5Q2MKA5 Gm35549-202ENSMUST00000203656 1009 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
Chrna5Q2MKA5 AC159376.1-201ENSMUST00000218504 630 ntBASIC14.37□□□□□ -0.11
Chrna5Q2MKA5 CT030653.1-201ENSMUST00000224382 1279 ntBASIC14.37□□□□□ -0.11
Chrna5Q2MKA5 Crygs-201ENSMUST00000040592 708 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Chrna5Q2MKA5 Olfr1350-201ENSMUST00000070985 927 ntAPPRIS P1 BASIC14.37□□□□□ -0.11
Chrna5Q2MKA5 Cacna1g-209ENSMUST00000107791 8002 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
Chrna5Q2MKA5 Nfic-202ENSMUST00000078185 3163 ntTSL 5 BASIC14.37□□□□□ -0.11
Chrna5Q2MKA5 Gm45266-201ENSMUST00000210111 2173 ntBASIC14.37□□□□□ -0.11
Chrna5Q2MKA5 Apc-202ENSMUST00000079362 8867 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Chrna5Q2MKA5 Il1rn-204ENSMUST00000114487 2474 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Chrna5Q2MKA5 Cfap161-201ENSMUST00000011298 1335 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Chrna5Q2MKA5 M6pr-202ENSMUST00000112610 2539 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
Chrna5Q2MKA5 Nsmce2-202ENSMUST00000168722 2679 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Chrna5Q2MKA5 Grip1-202ENSMUST00000077871 3720 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Chrna5Q2MKA5 Steap3-204ENSMUST00000112643 2873 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Chrna5Q2MKA5 Gpd1-201ENSMUST00000023760 2861 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Chrna5Q2MKA5 Ap4b1-203ENSMUST00000106823 2741 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Chrna5Q2MKA5 Gm2420-201ENSMUST00000119864 2149 ntBASIC14.36□□□□□ -0.11
Chrna5Q2MKA5 Palld-203ENSMUST00000121493 5445 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Chrna5Q2MKA5 Lctl-201ENSMUST00000034969 2171 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Chrna5Q2MKA5 Ankrd53-201ENSMUST00000014891 1739 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Chrna5Q2MKA5 Gm15513-201ENSMUST00000140646 1569 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Chrna5Q2MKA5 Chd1-202ENSMUST00000024627 7916 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Chrna5Q2MKA5 D6Ertd527e-203ENSMUST00000203747 2216 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
Chrna5Q2MKA5 Ighv7-2-201ENSMUST00000103462 354 ntAPPRIS ALT2 BASIC14.36□□□□□ -0.11
Chrna5Q2MKA5 Rad54b-203ENSMUST00000108306 652 ntTSL 3 BASIC14.36□□□□□ -0.11
Chrna5Q2MKA5 Nudt1-205ENSMUST00000110827 744 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
Chrna5Q2MKA5 Gm21972-201ENSMUST00000135197 776 ntAPPRIS P1 TSL 3 BASIC14.36□□□□□ -0.11
Chrna5Q2MKA5 Sox5os3-201ENSMUST00000139351 906 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Chrna5Q2MKA5 Gm37406-201ENSMUST00000192478 500 ntTSL 3 BASIC14.36□□□□□ -0.11
Chrna5Q2MKA5 Gm45113-201ENSMUST00000207518 165 ntBASIC14.36□□□□□ -0.11
Chrna5Q2MKA5 Gm17931-201ENSMUST00000208132 634 ntBASIC14.36□□□□□ -0.11
Chrna5Q2MKA5 Gm9111-201ENSMUST00000219394 709 ntBASIC14.36□□□□□ -0.11
Chrna5Q2MKA5 AC112945.1-201ENSMUST00000226413 514 ntBASIC14.36□□□□□ -0.11
Chrna5Q2MKA5 AC136376.2-201ENSMUST00000228819 490 ntBASIC14.36□□□□□ -0.11
Chrna5Q2MKA5 Tff2-201ENSMUST00000024826 584 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Chrna5Q2MKA5 Gm44942-201ENSMUST00000096093 2072 ntBASIC14.36□□□□□ -0.11
Chrna5Q2MKA5 Zfp444-204ENSMUST00000108567 5104 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Chrna5Q2MKA5 Spata7-203ENSMUST00000101146 1913 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Chrna5Q2MKA5 Thap2-202ENSMUST00000218842 4970 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Chrna5Q2MKA5 Prss23-201ENSMUST00000041761 3228 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Chrna5Q2MKA5 Gm595-201ENSMUST00000114928 2122 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Chrna5Q2MKA5 Ccdc187-201ENSMUST00000057224 3148 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Chrna5Q2MKA5 Mfsd4a-207ENSMUST00000159038 1957 ntAPPRIS P2 TSL 5 BASIC14.36□□□□□ -0.11
Chrna5Q2MKA5 Insrr-202ENSMUST00000107582 4694 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
Chrna5Q2MKA5 Zyx-202ENSMUST00000164375 3188 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
Chrna5Q2MKA5 Prdm5-202ENSMUST00000031976 2155 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Chrna5Q2MKA5 Twf1-201ENSMUST00000023087 3025 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Chrna5Q2MKA5 Irf2bpl-201ENSMUST00000038422 4098 ntAPPRIS P1 BASIC14.36□□□□□ -0.11
Chrna5Q2MKA5 Dbn1-201ENSMUST00000021950 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Chrna5Q2MKA5 Rbm12b1-201ENSMUST00000050069 2949 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Chrna5Q2MKA5 Lingo1-202ENSMUST00000114247 2287 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Chrna5Q2MKA5 Ptgdr2-201ENSMUST00000037261 2644 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Chrna5Q2MKA5 Usp2-201ENSMUST00000034508 3867 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Chrna5Q2MKA5 Fancm-201ENSMUST00000058889 7775 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Chrna5Q2MKA5 Tbc1d22a-201ENSMUST00000063414 3229 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Chrna5Q2MKA5 Alms1-ps1-201ENSMUST00000159498 2166 ntBASIC14.35□□□□□ -0.11
Chrna5Q2MKA5 Xrra1-201ENSMUST00000036155 2731 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Chrna5Q2MKA5 Gm7150-201ENSMUST00000122032 981 ntBASIC14.35□□□□□ -0.11
Chrna5Q2MKA5 Gm13391-202ENSMUST00000147685 816 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Chrna5Q2MKA5 1810020O05Rik-201ENSMUST00000162547 1047 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Chrna5Q2MKA5 Csmd2os-202ENSMUST00000179945 643 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Chrna5Q2MKA5 Rpain-201ENSMUST00000018593 1100 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Chrna5Q2MKA5 1700018A23Rik-201ENSMUST00000201350 398 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Chrna5Q2MKA5 Gm7972-202ENSMUST00000208453 505 ntTSL 3 BASIC14.35□□□□□ -0.11
Chrna5Q2MKA5 Gm45410-201ENSMUST00000211331 1093 ntBASIC14.35□□□□□ -0.11
Chrna5Q2MKA5 Hils1-201ENSMUST00000038928 864 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
Chrna5Q2MKA5 Gm4744-201ENSMUST00000073642 792 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
Chrna5Q2MKA5 Olfr1047-201ENSMUST00000099901 960 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
Chrna5Q2MKA5 Ranbp17-202ENSMUST00000102815 5001 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Chrna5Q2MKA5 Prrt3-203ENSMUST00000204268 3741 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Chrna5Q2MKA5 Prpf40a-206ENSMUST00000209364 2833 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 71.1 ms