Protein–RNA interactions for Protein: Q07802

Ebf1, Transcription factor COE1, mousemouse

Predictions only

Length 591 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ebf1Q07802 Cd79b-201ENSMUST00000044228 1431 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Ebf1Q07802 Eogt-201ENSMUST00000054344 4424 ntAPPRIS P2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Ebf1Q07802 Apopt1-203ENSMUST00000162316 3107 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Ebf1Q07802 Specc1-212ENSMUST00000202178 2932 ntTSL 5 BASIC12.34□□□□□ -0.43
Ebf1Q07802 BC003331-203ENSMUST00000097546 3174 ntAPPRIS ALT2 TSL 5 BASIC12.34□□□□□ -0.43
Ebf1Q07802 Hdac5-201ENSMUST00000008999 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Ebf1Q07802 Ap5b1-201ENSMUST00000096318 3092 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Ebf1Q07802 Pik3cd-203ENSMUST00000105689 3132 ntAPPRIS ALT1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Ebf1Q07802 Rad9b-202ENSMUST00000117263 2371 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Ebf1Q07802 Acin1-208ENSMUST00000126166 2369 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Ebf1Q07802 Cnpy2-202ENSMUST00000219037 1383 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Ebf1Q07802 Tnk1-201ENSMUST00000001626 2778 ntAPPRIS P2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Ebf1Q07802 St6galnac6-201ENSMUST00000072111 2277 ntAPPRIS P3 TSL 5 BASIC12.34□□□□□ -0.43
Ebf1Q07802 Fank1-201ENSMUST00000065359 2004 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Ebf1Q07802 Lyzl6-202ENSMUST00000107014 802 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Ebf1Q07802 Gm12165-201ENSMUST00000117047 342 ntBASIC12.34□□□□□ -0.43
Ebf1Q07802 Gm11628-201ENSMUST00000117568 171 ntBASIC12.34□□□□□ -0.43
Ebf1Q07802 Gm15515-201ENSMUST00000117827 822 ntBASIC12.34□□□□□ -0.43
Ebf1Q07802 Oaz2-ps-201ENSMUST00000121735 537 ntBASIC12.34□□□□□ -0.43
Ebf1Q07802 Rmrp-201ENSMUST00000157463 271 ntBASIC12.34□□□□□ -0.43
Ebf1Q07802 Gm19459-201ENSMUST00000176240 835 ntBASIC12.34□□□□□ -0.43
Ebf1Q07802 AC156504.2-201ENSMUST00000213800 711 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Ebf1Q07802 AL732506.1-201ENSMUST00000226420 281 ntBASIC12.34□□□□□ -0.43
Ebf1Q07802 Pf4-201ENSMUST00000031320 588 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Ebf1Q07802 Gm9996-201ENSMUST00000070359 913 ntBASIC12.34□□□□□ -0.43
Ebf1Q07802 Olfr1250-201ENSMUST00000099768 1139 ntAPPRIS P1 BASIC12.34□□□□□ -0.43
Ebf1Q07802 3110062M04Rik-203ENSMUST00000115007 3326 ntAPPRIS P3 TSL 1 (best) BASIC12.34□□□□□ -0.43
Ebf1Q07802 Cpeb3-204ENSMUST00000126188 4224 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Ebf1Q07802 Cd72-204ENSMUST00000107925 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Ebf1Q07802 Gm18626-201ENSMUST00000221512 1409 ntBASIC12.34□□□□□ -0.43
Ebf1Q07802 Ccdc187-201ENSMUST00000057224 3148 ntAPPRIS P2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Ebf1Q07802 Ccr7-201ENSMUST00000103134 1978 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Ebf1Q07802 Cab39-201ENSMUST00000097666 2369 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
Ebf1Q07802 Nmral1-203ENSMUST00000115851 1306 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Ebf1Q07802 Olfr1349-204ENSMUST00000207820 1325 ntAPPRIS P1 TSL 3 BASIC12.34□□□□□ -0.43
Ebf1Q07802 Fxr1-204ENSMUST00000197694 2129 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
Ebf1Q07802 Limch1-204ENSMUST00000118242 5050 ntAPPRIS ALT2 TSL 5 BASIC12.34□□□□□ -0.43
Ebf1Q07802 Tmx2-203ENSMUST00000111665 2282 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Ebf1Q07802 Dtx1-201ENSMUST00000031607 4035 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Ebf1Q07802 Oprd1-201ENSMUST00000056336 4021 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Ebf1Q07802 Itgb4-203ENSMUST00000106458 5779 ntAPPRIS ALT2 TSL 5 BASIC12.33□□□□□ -0.43
Ebf1Q07802 Misp-201ENSMUST00000046833 2414 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.43
Ebf1Q07802 Alppl2-202ENSMUST00000188310 2016 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.43
Ebf1Q07802 Sv2a-201ENSMUST00000035371 4334 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.43
Ebf1Q07802 Chrdl1-202ENSMUST00000074660 4096 ntAPPRIS P3 TSL 1 (best) BASIC12.33□□□□□ -0.43
Ebf1Q07802 Ttc23l-201ENSMUST00000022857 1931 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Ebf1Q07802 Ltbp2-203ENSMUST00000163189 6470 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Ebf1Q07802 AL670603.1-201ENSMUST00000216692 1535 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.44
Ebf1Q07802 Sp3-202ENSMUST00000102689 4181 ntAPPRIS P2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Ebf1Q07802 Dnaja2-201ENSMUST00000034138 2919 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Ebf1Q07802 Zscan10-202ENSMUST00000115509 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Ebf1Q07802 Fam177a-201ENSMUST00000177768 3922 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Ebf1Q07802 Pxn-202ENSMUST00000086523 2667 ntAPPRIS ALT2 TSL 2 BASIC12.33□□□□□ -0.44
Ebf1Q07802 Gm10961-201ENSMUST00000106703 144 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.44
Ebf1Q07802 Inca1-202ENSMUST00000108541 1150 ntAPPRIS P3 TSL 1 (best) BASIC12.33□□□□□ -0.44
Ebf1Q07802 Uox-202ENSMUST00000121133 768 ntTSL 5 BASIC12.33□□□□□ -0.44
Ebf1Q07802 Inca1-205ENSMUST00000126114 1189 ntAPPRIS P3 TSL 1 (best) BASIC12.33□□□□□ -0.44
Ebf1Q07802 Sh2d6-203ENSMUST00000159877 1210 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Ebf1Q07802 Sh2d6-206ENSMUST00000162561 1251 ntAPPRIS P5 TSL 1 (best) BASIC12.33□□□□□ -0.44
Ebf1Q07802 9030616G12Rik-201ENSMUST00000181142 644 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Ebf1Q07802 Gm18304-201ENSMUST00000189162 546 ntBASIC12.33□□□□□ -0.44
Ebf1Q07802 3300002P13Rik-201ENSMUST00000204020 1092 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Ebf1Q07802 Cct2-206ENSMUST00000219573 637 ntTSL 3 BASIC12.33□□□□□ -0.44
Ebf1Q07802 Gm46400-201ENSMUST00000222294 724 ntTSL 5 BASIC12.33□□□□□ -0.44
Ebf1Q07802 Inca1-201ENSMUST00000073625 1218 ntAPPRIS P3 TSL 1 (best) BASIC12.33□□□□□ -0.44
Ebf1Q07802 Olfr1413-201ENSMUST00000074859 1082 ntAPPRIS P1 BASIC12.33□□□□□ -0.44
Ebf1Q07802 Gm10179-201ENSMUST00000086233 688 ntBASIC12.33□□□□□ -0.44
Ebf1Q07802 Fbxo46-201ENSMUST00000053109 4873 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Ebf1Q07802 Pank4-202ENSMUST00000070953 2706 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Ebf1Q07802 Rcsd1-202ENSMUST00000097474 5001 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Ebf1Q07802 Ccdc170-201ENSMUST00000019901 2151 ntAPPRIS P2 TSL 5 BASIC12.33□□□□□ -0.44
Ebf1Q07802 Slc39a9-204ENSMUST00000217889 2155 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Ebf1Q07802 Cplx1-201ENSMUST00000046892 2189 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Ebf1Q07802 Sipa1l2-204ENSMUST00000212987 6690 ntAPPRIS P2 TSL 5 BASIC12.33□□□□□ -0.44
Ebf1Q07802 Gm37391-201ENSMUST00000194891 2318 ntBASIC12.33□□□□□ -0.44
Ebf1Q07802 Vsx2-202ENSMUST00000169934 3249 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Ebf1Q07802 Izumo1-201ENSMUST00000033100 1493 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Ebf1Q07802 Cldn18-202ENSMUST00000112882 1750 ntAPPRIS ALT1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Ebf1Q07802 Sept10-201ENSMUST00000165971 2532 ntAPPRIS P2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Ebf1Q07802 Sp4-203ENSMUST00000222314 2677 ntAPPRIS P2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Ebf1Q07802 Eif4enif1-202ENSMUST00000110048 3712 ntTSL 5 BASIC12.33□□□□□ -0.44
Ebf1Q07802 Pdp1-203ENSMUST00000108297 4201 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
Ebf1Q07802 Corin-201ENSMUST00000005352 4862 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
Ebf1Q07802 Setdb1-203ENSMUST00000107171 4573 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Ebf1Q07802 Sall4-201ENSMUST00000029061 5073 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Ebf1Q07802 Rnf43-203ENSMUST00000121782 2640 ntTSL 5 BASIC12.32□□□□□ -0.44
Ebf1Q07802 Serpinf2-202ENSMUST00000108437 2179 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Ebf1Q07802 Adamts7-207ENSMUST00000147250 4833 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Ebf1Q07802 Grm4-202ENSMUST00000118489 2976 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Ebf1Q07802 Adgrl1-204ENSMUST00000131717 5152 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Ebf1Q07802 Rapgef3-205ENSMUST00000129223 3750 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Ebf1Q07802 Polrmt-201ENSMUST00000020580 3755 ntAPPRIS P2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Ebf1Q07802 Oxr1-204ENSMUST00000110297 4596 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Ebf1Q07802 Gm8617-201ENSMUST00000118796 2222 ntBASIC12.32□□□□□ -0.44
Ebf1Q07802 Gm22133-201ENSMUST00000102082 109 ntBASIC12.32□□□□□ -0.44
Ebf1Q07802 Grin1-205ENSMUST00000114312 3838 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Ebf1Q07802 Grin1-207ENSMUST00000114317 3809 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Ebf1Q07802 Gm14058-201ENSMUST00000116082 735 ntBASIC12.32□□□□□ -0.44
Ebf1Q07802 H2-M6-ps-201ENSMUST00000119193 1034 ntBASIC12.32□□□□□ -0.44
Ebf1Q07802 Gm6506-201ENSMUST00000119775 1136 ntBASIC12.32□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 73.8 ms