Protein–RNA interactions for Protein: Q04887

Sox9, Transcription factor SOX-9, mousemouse

Predictions only

Length 507 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox9Q04887 Elmo3-202ENSMUST00000212033 2351 ntTSL 5 BASIC12.57□□□□□ -0.4
Sox9Q04887 Ilvbl-212ENSMUST00000220430 2350 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Sox9Q04887 Lynx1-201ENSMUST00000023259 4023 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Sox9Q04887 Saa3-202ENSMUST00000210913 2200 ntTSL 3 BASIC12.57□□□□□ -0.4
Sox9Q04887 Gm14963-201ENSMUST00000146751 2558 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Sox9Q04887 Il1rapl2-202ENSMUST00000113063 3437 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Sox9Q04887 Pcgf2-202ENSMUST00000103148 1438 ntAPPRIS P1 TSL 5 BASIC12.57□□□□□ -0.4
Sox9Q04887 Rab13-202ENSMUST00000107373 1415 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Sox9Q04887 Ankrd61-203ENSMUST00000110718 1774 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Sox9Q04887 Rtn2-202ENSMUST00000108468 1076 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Sox9Q04887 Acrbp-204ENSMUST00000112413 672 ntTSL 2 BASIC12.57□□□□□ -0.4
Sox9Q04887 Tbata-203ENSMUST00000121297 1000 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Sox9Q04887 Gm13394-201ENSMUST00000121658 1000 ntBASIC12.57□□□□□ -0.4
Sox9Q04887 Gm15906-201ENSMUST00000124746 323 ntTSL 5 BASIC12.57□□□□□ -0.4
Sox9Q04887 Pyy-202ENSMUST00000127381 529 ntAPPRIS ALT2 TSL 2 BASIC12.57□□□□□ -0.4
Sox9Q04887 Gm14236-201ENSMUST00000142374 872 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Sox9Q04887 Gm15722-201ENSMUST00000159271 661 ntTSL 3 BASIC12.57□□□□□ -0.4
Sox9Q04887 1700121N20Rik-201ENSMUST00000167922 1027 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Sox9Q04887 Gm18201-201ENSMUST00000174735 875 ntBASIC12.57□□□□□ -0.4
Sox9Q04887 Gm26989-201ENSMUST00000182608 749 ntBASIC12.57□□□□□ -0.4
Sox9Q04887 Tmbim7-204ENSMUST00000198739 1270 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Sox9Q04887 Fxyd4-202ENSMUST00000203066 522 ntTSL 3 BASIC12.57□□□□□ -0.4
Sox9Q04887 Gm3017-201ENSMUST00000203603 1126 ntBASIC12.57□□□□□ -0.4
Sox9Q04887 Gm44647-201ENSMUST00000207402 428 ntBASIC12.57□□□□□ -0.4
Sox9Q04887 Gm6685-201ENSMUST00000042595 764 ntAPPRIS P1 BASIC12.57□□□□□ -0.4
Sox9Q04887 Gm5705-201ENSMUST00000066241 711 ntBASIC12.57□□□□□ -0.4
Sox9Q04887 Rps10-ps1-201ENSMUST00000074353 495 ntBASIC12.57□□□□□ -0.4
Sox9Q04887 Mau2-201ENSMUST00000050561 5369 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
Sox9Q04887 Csrnp3-202ENSMUST00000112394 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Sox9Q04887 Mul1-202ENSMUST00000105813 3944 ntTSL 5 BASIC12.57□□□□□ -0.4
Sox9Q04887 Zfp61-208ENSMUST00000165241 1668 ntAPPRIS P1 TSL 5 BASIC12.57□□□□□ -0.4
Sox9Q04887 Tcf4-249ENSMUST00000202435 2427 ntTSL 5 BASIC12.57□□□□□ -0.4
Sox9Q04887 B430212C06Rik-205ENSMUST00000145081 2623 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Sox9Q04887 Camsap3-202ENSMUST00000171962 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Sox9Q04887 Draxin-201ENSMUST00000030862 5200 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Sox9Q04887 Hlf-201ENSMUST00000004051 5642 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Sox9Q04887 Chrna10-201ENSMUST00000084830 2513 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Sox9Q04887 Gad2-201ENSMUST00000028123 5744 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Sox9Q04887 Gsdma-201ENSMUST00000017348 2726 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Sox9Q04887 Zfp385c-201ENSMUST00000103119 2766 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Sox9Q04887 Ahdc1-204ENSMUST00000105916 6602 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
Sox9Q04887 Otud4-203ENSMUST00000173286 7213 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Sox9Q04887 St8sia3-201ENSMUST00000025477 6282 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Sox9Q04887 Tbr1-201ENSMUST00000048934 3977 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Sox9Q04887 Strip1-201ENSMUST00000064759 3215 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Sox9Q04887 Zc3h7b-201ENSMUST00000109554 5958 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Sox9Q04887 Gm12579-201ENSMUST00000118040 783 ntBASIC12.56□□□□□ -0.4
Sox9Q04887 Gm16166-201ENSMUST00000118291 787 ntBASIC12.56□□□□□ -0.4
Sox9Q04887 Rhox3d-ps-201ENSMUST00000119181 825 ntBASIC12.56□□□□□ -0.4
Sox9Q04887 Gm6630-201ENSMUST00000119199 454 ntBASIC12.56□□□□□ -0.4
Sox9Q04887 Gm14942-201ENSMUST00000119642 336 ntBASIC12.56□□□□□ -0.4
Sox9Q04887 4931406G06Rik-201ENSMUST00000147848 1252 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Sox9Q04887 AA672651-201ENSMUST00000151550 489 ntTSL 2 BASIC12.56□□□□□ -0.4
Sox9Q04887 2810403D21Rik-208ENSMUST00000153212 1005 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Sox9Q04887 Gm22146-201ENSMUST00000157397 288 ntBASIC12.56□□□□□ -0.4
Sox9Q04887 Gm20420-201ENSMUST00000173178 639 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Sox9Q04887 Mir6407-201ENSMUST00000184510 101 ntBASIC12.56□□□□□ -0.4
Sox9Q04887 Gm37406-201ENSMUST00000192478 500 ntTSL 3 BASIC12.56□□□□□ -0.4
Sox9Q04887 Gm37800-202ENSMUST00000193667 553 ntTSL 3 BASIC12.56□□□□□ -0.4
Sox9Q04887 Gm8956-201ENSMUST00000203939 825 ntBASIC12.56□□□□□ -0.4
Sox9Q04887 AC154361.2-201ENSMUST00000224747 943 ntBASIC12.56□□□□□ -0.4
Sox9Q04887 Sapcd1-201ENSMUST00000040151 935 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Sox9Q04887 Sept4-202ENSMUST00000063156 1245 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Sox9Q04887 Trappc2l-201ENSMUST00000015157 1659 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Sox9Q04887 5033403F01Rik-201ENSMUST00000181376 1678 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Sox9Q04887 Chrnd-202ENSMUST00000186373 2949 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Sox9Q04887 Med8-204ENSMUST00000106384 1743 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Sox9Q04887 Fcgr1-201ENSMUST00000029748 2589 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Sox9Q04887 Rnf19b-202ENSMUST00000097874 1992 ntTSL 5 BASIC12.56□□□□□ -0.4
Sox9Q04887 Hspa14-201ENSMUST00000027961 1795 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Sox9Q04887 Cdc42se1-201ENSMUST00000053872 2805 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Sox9Q04887 Trpm4-209ENSMUST00000211743 3673 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Sox9Q04887 Rtbdn-202ENSMUST00000109740 1363 ntAPPRIS P2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Sox9Q04887 Larp4b-202ENSMUST00000188211 5610 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Sox9Q04887 Slc38a10-204ENSMUST00000103018 4578 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
Sox9Q04887 Hadhb-203ENSMUST00000114786 2048 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Sox9Q04887 Apaf1-207ENSMUST00000161987 2710 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Sox9Q04887 Traf1-202ENSMUST00000113064 2325 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Sox9Q04887 Gm43721-201ENSMUST00000199677 2313 ntBASIC12.55□□□□□ -0.4
Sox9Q04887 Fasn-201ENSMUST00000055655 10050 ntAPPRIS P2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Sox9Q04887 Naa15-205ENSMUST00000193266 7480 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Sox9Q04887 Mapk4-201ENSMUST00000091851 4594 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Sox9Q04887 Cpne1-201ENSMUST00000079312 1683 ntTSL 5 BASIC12.55□□□□□ -0.4
Sox9Q04887 Zfp429-202ENSMUST00000181071 2117 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Sox9Q04887 4930430F08Rik-201ENSMUST00000054471 2564 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Sox9Q04887 Slc6a21-206ENSMUST00000210861 2838 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
Sox9Q04887 Gm5434-202ENSMUST00000222384 1451 ntBASIC12.55□□□□□ -0.4
Sox9Q04887 Gm5434-201ENSMUST00000071825 1451 ntBASIC12.55□□□□□ -0.4
Sox9Q04887 Gm16090-201ENSMUST00000130296 1704 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Sox9Q04887 Fgfr3-211ENSMUST00000171509 4020 ntAPPRIS ALT2 TSL 5 BASIC12.55□□□□□ -0.4
Sox9Q04887 Trpv4-202ENSMUST00000112217 2436 ntTSL 5 BASIC12.55□□□□□ -0.4
Sox9Q04887 Ighv2-6-8-201ENSMUST00000103455 342 ntAPPRIS ALT2 BASIC12.55□□□□□ -0.4
Sox9Q04887 Gm12030-201ENSMUST00000121917 223 ntBASIC12.55□□□□□ -0.4
Sox9Q04887 Gm13267-201ENSMUST00000142787 698 ntTSL 3 BASIC12.55□□□□□ -0.4
Sox9Q04887 Gm11379-201ENSMUST00000154678 381 ntTSL 3 BASIC12.55□□□□□ -0.4
Sox9Q04887 Gm23119-201ENSMUST00000158610 140 ntBASIC12.55□□□□□ -0.4
Sox9Q04887 Cnfn-202ENSMUST00000167591 698 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Sox9Q04887 Nudt12-203ENSMUST00000174122 1244 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Sox9Q04887 Gm28529-201ENSMUST00000186159 387 ntTSL 3 BASIC12.55□□□□□ -0.4
Sox9Q04887 Gm45441-202ENSMUST00000209301 1235 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 74.2 ms