Protein–RNA interactions for Protein: P98083

Shc1, SHC-transforming protein 1, mousemouse

Predictions only

Length 579 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shc1P98083 Wdr59-201ENSMUST00000034437 4896 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Shc1P98083 Prodh-205ENSMUST00000136776 2041 ntAPPRIS ALT2 TSL 5 BASIC10.94□□□□□ -0.66
Shc1P98083 Cisd2-201ENSMUST00000029815 3361 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Shc1P98083 H2-Q1-201ENSMUST00000073208 2024 ntAPPRIS P2 TSL 1 (best) BASIC10.94□□□□□ -0.66
Shc1P98083 Ikzf1-201ENSMUST00000018798 1542 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Shc1P98083 Mettl27-201ENSMUST00000047196 2808 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Shc1P98083 Tardbp-204ENSMUST00000105699 1904 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Shc1P98083 Sh3gl3-206ENSMUST00000179318 1489 ntTSL 5 BASIC10.93□□□□□ -0.66
Shc1P98083 Ctnnb1-214ENSMUST00000178812 2702 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Shc1P98083 Fam177a-201ENSMUST00000177768 3922 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Shc1P98083 Slc39a3-205ENSMUST00000168076 3461 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Shc1P98083 Gpr176-201ENSMUST00000039160 3899 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Shc1P98083 Pga5-201ENSMUST00000025647 1417 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Shc1P98083 Pmp2-201ENSMUST00000029034 1408 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Shc1P98083 Flrt1-201ENSMUST00000113383 5859 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Shc1P98083 Slc7a3-201ENSMUST00000073927 2232 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Shc1P98083 Zscan22-201ENSMUST00000055528 2620 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Shc1P98083 Clpb-201ENSMUST00000001884 4627 ntAPPRIS P2 TSL 1 (best) BASIC10.93□□□□□ -0.66
Shc1P98083 Nsf-202ENSMUST00000103075 3766 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Shc1P98083 Hmg20a-204ENSMUST00000214869 1782 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Shc1P98083 Cnpy2-202ENSMUST00000219037 1383 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Shc1P98083 Clpx-201ENSMUST00000015501 2885 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Shc1P98083 D930032P07Rik-201ENSMUST00000181393 1314 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Shc1P98083 Fbxl12-201ENSMUST00000086458 2056 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Shc1P98083 Kdm1b-201ENSMUST00000037025 4987 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Shc1P98083 Eps15l1-201ENSMUST00000163643 3129 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Shc1P98083 Atg2b-201ENSMUST00000041055 7546 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Shc1P98083 Gm13944-201ENSMUST00000126572 721 ntTSL 2 BASIC10.93□□□□□ -0.66
Shc1P98083 Gm12130-201ENSMUST00000133599 639 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Shc1P98083 Gm12984-201ENSMUST00000145711 273 ntTSL 5 BASIC10.93□□□□□ -0.66
Shc1P98083 Gm11379-201ENSMUST00000154678 381 ntTSL 3 BASIC10.93□□□□□ -0.66
Shc1P98083 Rprl1-201ENSMUST00000158050 327 ntBASIC10.93□□□□□ -0.66
Shc1P98083 Gm20636-201ENSMUST00000176660 707 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Shc1P98083 Rpl36-ps4-201ENSMUST00000179601 354 ntAPPRIS P1 TSL 5 BASIC10.93□□□□□ -0.66
Shc1P98083 Gm8856-201ENSMUST00000185254 1144 ntBASIC10.93□□□□□ -0.66
Shc1P98083 Gm38319-201ENSMUST00000194537 1266 ntBASIC10.93□□□□□ -0.66
Shc1P98083 Gm43050-201ENSMUST00000201062 338 ntTSL 2 BASIC10.93□□□□□ -0.66
Shc1P98083 Rassf4-202ENSMUST00000203029 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC10.93□□□□□ -0.66
Shc1P98083 Gm44934-201ENSMUST00000208941 238 ntTSL 5 BASIC10.93□□□□□ -0.66
Shc1P98083 9230110C19Rik-202ENSMUST00000215478 533 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Shc1P98083 Clec4b2-201ENSMUST00000088455 1174 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Shc1P98083 Brwd1-202ENSMUST00000099502 8547 ntAPPRIS P2 TSL 1 (best) BASIC10.93□□□□□ -0.66
Shc1P98083 Bckdk-201ENSMUST00000071056 3405 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Shc1P98083 Slc35f6-205ENSMUST00000196740 1972 ntTSL 5 BASIC10.93□□□□□ -0.66
Shc1P98083 Cmtm6-201ENSMUST00000035007 3383 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Shc1P98083 Snrk-203ENSMUST00000120173 4758 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Shc1P98083 Brdt-201ENSMUST00000031215 4745 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Shc1P98083 Prss42-201ENSMUST00000035715 1584 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Shc1P98083 Pkib-203ENSMUST00000095668 3311 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Shc1P98083 Htr2c-207ENSMUST00000156697 4654 ntTSL 5 BASIC10.93□□□□□ -0.66
Shc1P98083 Tfcp2-201ENSMUST00000009877 3250 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Shc1P98083 Txndc5-203ENSMUST00000160653 2586 ntAPPRIS ALT2 TSL 1 (best) BASIC10.93□□□□□ -0.66
Shc1P98083 Mpp4-204ENSMUST00000186477 1885 ntAPPRIS ALT2 TSL 5 BASIC10.93□□□□□ -0.66
Shc1P98083 Nyap1-202ENSMUST00000118326 4565 ntAPPRIS P3 TSL 1 (best) BASIC10.93□□□□□ -0.66
Shc1P98083 Pde4d-201ENSMUST00000074103 2167 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Shc1P98083 Samd4-202ENSMUST00000100672 4165 ntAPPRIS ALT2 TSL 1 (best) BASIC10.93□□□□□ -0.66
Shc1P98083 Mier1-205ENSMUST00000106858 4830 ntAPPRIS P3 TSL 1 (best) BASIC10.93□□□□□ -0.66
Shc1P98083 Fancc-214ENSMUST00000161977 3111 ntAPPRIS P3 TSL 1 (best) BASIC10.93□□□□□ -0.66
Shc1P98083 Stpg3-201ENSMUST00000043774 1430 ntAPPRIS P2 TSL 1 (best) BASIC10.92□□□□□ -0.66
Shc1P98083 Rdh8-201ENSMUST00000066387 1405 ntAPPRIS P1 TSL 2 BASIC10.92□□□□□ -0.66
Shc1P98083 Gtf2ird1-202ENSMUST00000074114 3330 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Shc1P98083 Gm14132-201ENSMUST00000117188 1719 ntBASIC10.92□□□□□ -0.66
Shc1P98083 Rabep1-203ENSMUST00000100928 3860 ntTSL 5 BASIC10.92□□□□□ -0.66
Shc1P98083 4933411K16Rik-201ENSMUST00000164518 1380 ntAPPRIS P1 BASIC10.92□□□□□ -0.66
Shc1P98083 Ap1g2-211ENSMUST00000170285 2596 ntAPPRIS P1 TSL 5 BASIC10.92□□□□□ -0.66
Shc1P98083 Gm36635-201ENSMUST00000221152 1332 ntTSL 5 BASIC10.92□□□□□ -0.66
Shc1P98083 Wnt3-201ENSMUST00000000127 3076 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Shc1P98083 Slc35e2-202ENSMUST00000105608 6291 ntAPPRIS P1 TSL 5 BASIC10.92□□□□□ -0.66
Shc1P98083 Krt31-201ENSMUST00000007318 1581 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Shc1P98083 Calm1-202ENSMUST00000110082 4115 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Shc1P98083 Mroh5-202ENSMUST00000110021 2145 ntAPPRIS ALT2 TSL 1 (best) BASIC10.92□□□□□ -0.66
Shc1P98083 Rbm3-202ENSMUST00000115615 1183 ntAPPRIS ALT1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Shc1P98083 Rbm3-203ENSMUST00000115616 1225 ntAPPRIS P3 TSL 1 (best) BASIC10.92□□□□□ -0.66
Shc1P98083 Gm15808-201ENSMUST00000119046 604 ntBASIC10.92□□□□□ -0.66
Shc1P98083 H2-M6-ps-201ENSMUST00000119193 1034 ntBASIC10.92□□□□□ -0.66
Shc1P98083 4933406I18Rik-201ENSMUST00000124673 905 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Shc1P98083 B230206L02Rik-202ENSMUST00000132584 695 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Shc1P98083 Rprl1-202ENSMUST00000198476 238 ntBASIC10.92□□□□□ -0.66
Shc1P98083 Gm5869-201ENSMUST00000200248 1257 ntBASIC10.92□□□□□ -0.66
Shc1P98083 1700011D18Rik-201ENSMUST00000205762 277 ntBASIC10.92□□□□□ -0.66
Shc1P98083 Rassf5-205ENSMUST00000212202 958 ntTSL 5 BASIC10.92□□□□□ -0.66
Shc1P98083 Trappc4-206ENSMUST00000217163 1185 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Shc1P98083 Gm19605-201ENSMUST00000220603 686 ntTSL 3 BASIC10.92□□□□□ -0.66
Shc1P98083 AC158523.3-201ENSMUST00000220664 864 ntTSL 5 BASIC10.92□□□□□ -0.66
Shc1P98083 Klk1b27-201ENSMUST00000079859 889 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Shc1P98083 Gfod2-201ENSMUST00000013294 4352 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Shc1P98083 Rgs12-207ENSMUST00000114285 2924 ntAPPRIS ALT2 TSL 5 BASIC10.92□□□□□ -0.66
Shc1P98083 Ercc2-202ENSMUST00000108460 3485 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Shc1P98083 Ccdc159-202ENSMUST00000170304 1519 ntAPPRIS ALT2 TSL 1 (best) BASIC10.92□□□□□ -0.66
Shc1P98083 Gm10767-202ENSMUST00000168767 2067 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Shc1P98083 Ildr1-203ENSMUST00000119464 2878 ntAPPRIS P3 TSL 1 (best) BASIC10.92□□□□□ -0.66
Shc1P98083 Hltf-201ENSMUST00000002502 4955 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Shc1P98083 Dnmt3l-202ENSMUST00000123940 1452 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Shc1P98083 Gm43908-201ENSMUST00000205074 1472 ntBASIC10.92□□□□□ -0.66
Shc1P98083 Mxd1-201ENSMUST00000001184 4666 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Shc1P98083 Lrp2-203ENSMUST00000100051 4359 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Shc1P98083 Tor3a-201ENSMUST00000079625 3285 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Shc1P98083 Pank4-202ENSMUST00000070953 2706 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Shc1P98083 Twnk-201ENSMUST00000026227 3488 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Shc1P98083 Dysf-210ENSMUST00000153860 6525 ntAPPRIS ALT2 TSL 5 BASIC10.92□□□□□ -0.66
Retrieved 100 of 76,532 protein–RNA pairs in 47.6 ms