Protein–RNA interactions for Protein: P97952

Scn1b, Sodium channel subunit beta-1, mousemouse

Predictions only

Length 218 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn1bP97952 Yeats2-202ENSMUST00000115560 6116 ntAPPRIS ALT2 TSL 5 BASIC11.1□□□□□ -0.63
Scn1bP97952 Lhx9-204ENSMUST00000112026 2065 ntAPPRIS P2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Scn1bP97952 4930463O16Rik-201ENSMUST00000020222 2088 ntTSL 2 BASIC11.1□□□□□ -0.63
Scn1bP97952 Tef-202ENSMUST00000109553 4401 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Scn1bP97952 Igsf1-204ENSMUST00000114893 2671 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Scn1bP97952 Tfr2-208ENSMUST00000199054 2966 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Scn1bP97952 AC131586.1-201ENSMUST00000228844 2964 ntBASIC11.1□□□□□ -0.63
Scn1bP97952 Cyp11b1-201ENSMUST00000170259 3165 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Scn1bP97952 Ptprt-204ENSMUST00000109445 12082 ntAPPRIS P3 TSL 1 (best) BASIC11.1□□□□□ -0.63
Scn1bP97952 Zbtb42-201ENSMUST00000169593 3478 ntAPPRIS P1 TSL 2 BASIC11.1□□□□□ -0.63
Scn1bP97952 Gm17281-201ENSMUST00000180732 3589 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Scn1bP97952 Cyp2t4-202ENSMUST00000164093 1512 ntAPPRIS P2 TSL 5 BASIC11.09□□□□□ -0.63
Scn1bP97952 Olfr541-203ENSMUST00000210357 1642 ntAPPRIS P1 TSL 2 BASIC11.09□□□□□ -0.63
Scn1bP97952 Gabrg3-201ENSMUST00000068394 1724 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Scn1bP97952 Olfr1428-203ENSMUST00000214103 2127 ntAPPRIS P1 TSL 5 BASIC11.09□□□□□ -0.63
Scn1bP97952 Rab3gap2-204ENSMUST00000194740 4418 ntAPPRIS ALT2 TSL 5 BASIC11.09□□□□□ -0.63
Scn1bP97952 Htr1b-202ENSMUST00000183482 4724 ntAPPRIS P1 TSL 3 BASIC11.09□□□□□ -0.63
Scn1bP97952 Ndst1-201ENSMUST00000169273 6070 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Scn1bP97952 Osbp2-201ENSMUST00000070552 4097 ntAPPRIS P3 TSL 5 BASIC11.09□□□□□ -0.63
Scn1bP97952 Gm45187-201ENSMUST00000207697 2760 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Scn1bP97952 Myf5-201ENSMUST00000000445 2083 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Scn1bP97952 Ccdc32-201ENSMUST00000036470 1870 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Scn1bP97952 Dnajb4-201ENSMUST00000029669 1497 ntAPPRIS P1 TSL 5 BASIC11.09□□□□□ -0.63
Scn1bP97952 AC101945.2-201ENSMUST00000227886 1377 ntBASIC11.09□□□□□ -0.63
Scn1bP97952 Tmem53-202ENSMUST00000106433 913 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Scn1bP97952 Gm14921-201ENSMUST00000118643 908 ntBASIC11.09□□□□□ -0.63
Scn1bP97952 Gm12341-201ENSMUST00000119724 503 ntBASIC11.09□□□□□ -0.63
Scn1bP97952 Pigyl-201ENSMUST00000123680 695 ntAPPRIS P1 TSL 2 BASIC11.09□□□□□ -0.63
Scn1bP97952 Gm15945-201ENSMUST00000146755 810 ntTSL 3 BASIC11.09□□□□□ -0.63
Scn1bP97952 Cpsf4l-205ENSMUST00000173655 1213 ntAPPRIS P3 TSL 1 (best) BASIC11.09□□□□□ -0.63
Scn1bP97952 Gm26894-201ENSMUST00000180828 1134 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Scn1bP97952 Mir6392-201ENSMUST00000184924 108 ntBASIC11.09□□□□□ -0.63
Scn1bP97952 Gm6458-201ENSMUST00000211573 635 ntBASIC11.09□□□□□ -0.63
Scn1bP97952 Ngfr-201ENSMUST00000000122 3446 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Scn1bP97952 Gm43760-201ENSMUST00000202120 3015 ntBASIC11.09□□□□□ -0.63
Scn1bP97952 Kcnh5-201ENSMUST00000042299 4058 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Scn1bP97952 Agrn-202ENSMUST00000105574 7193 ntTSL 5 BASIC11.09□□□□□ -0.63
Scn1bP97952 1700019D03Rik-202ENSMUST00000114492 3565 ntAPPRIS P1 TSL 3 BASIC11.09□□□□□ -0.63
Scn1bP97952 Tsen2-201ENSMUST00000040234 2106 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Scn1bP97952 Zfp68-203ENSMUST00000110905 4749 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Scn1bP97952 Tcof1-204ENSMUST00000176630 4529 ntAPPRIS P3 TSL 5 BASIC11.09□□□□□ -0.63
Scn1bP97952 Tardbp-204ENSMUST00000105699 1904 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Scn1bP97952 Rnps1-202ENSMUST00000115371 1617 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Scn1bP97952 Gm11638-201ENSMUST00000153672 1615 ntTSL 2 BASIC11.09□□□□□ -0.63
Scn1bP97952 Gm6034-201ENSMUST00000097331 1633 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Scn1bP97952 Gm21964-203ENSMUST00000219454 1513 ntAPPRIS P5 TSL 5 BASIC11.09□□□□□ -0.63
Scn1bP97952 Txlna-201ENSMUST00000046425 4569 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Scn1bP97952 Aldh16a1-206ENSMUST00000209963 3537 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Scn1bP97952 Gm9816-201ENSMUST00000122292 1414 ntBASIC11.09□□□□□ -0.63
Scn1bP97952 Klhl6-201ENSMUST00000058839 2386 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Scn1bP97952 Cdc7-204ENSMUST00000118261 3129 ntAPPRIS P3 TSL 1 (best) BASIC11.09□□□□□ -0.63
Scn1bP97952 C030034L19Rik-203ENSMUST00000181930 3133 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Scn1bP97952 Aqp6-201ENSMUST00000023754 2060 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.63
Scn1bP97952 Celf1-204ENSMUST00000111448 4432 ntAPPRIS ALT1 TSL 5 BASIC11.08□□□□□ -0.63
Scn1bP97952 Slc30a8-201ENSMUST00000037240 1971 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Scn1bP97952 Pdzk1-203ENSMUST00000107070 2711 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Scn1bP97952 Alox5-202ENSMUST00000164547 1854 ntTSL 5 BASIC11.08□□□□□ -0.64
Scn1bP97952 Olfr177-202ENSMUST00000217377 2401 ntAPPRIS P1 TSL 5 BASIC11.08□□□□□ -0.64
Scn1bP97952 Rpap1-202ENSMUST00000099529 4813 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Scn1bP97952 AC124397.2-201ENSMUST00000225575 2215 ntBASIC11.08□□□□□ -0.64
Scn1bP97952 Ccm2-202ENSMUST00000109721 1551 ntTSL 5 BASIC11.08□□□□□ -0.64
Scn1bP97952 Caln1-202ENSMUST00000111287 2106 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Scn1bP97952 Rbm47-205ENSMUST00000167950 4895 ntAPPRIS P3 TSL 1 (best) BASIC11.08□□□□□ -0.64
Scn1bP97952 Bean1-206ENSMUST00000213077 1373 ntAPPRIS ALT2 TSL 3 BASIC11.08□□□□□ -0.64
Scn1bP97952 Armc3-202ENSMUST00000114640 2818 ntAPPRIS P3 TSL 1 (best) BASIC11.08□□□□□ -0.64
Scn1bP97952 Gm5303-201ENSMUST00000117943 1252 ntBASIC11.08□□□□□ -0.64
Scn1bP97952 Stx5a-219ENSMUST00000177373 995 ntTSL 5 BASIC11.08□□□□□ -0.64
Scn1bP97952 Gm28631-201ENSMUST00000190740 334 ntBASIC11.08□□□□□ -0.64
Scn1bP97952 Hcfc1r1-201ENSMUST00000024697 946 ntAPPRIS P2 TSL 1 (best) BASIC11.08□□□□□ -0.64
Scn1bP97952 Aip-201ENSMUST00000025767 1261 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Scn1bP97952 Bcdin3d-201ENSMUST00000040313 1271 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Scn1bP97952 Gm2423-201ENSMUST00000074863 733 ntBASIC11.08□□□□□ -0.64
Scn1bP97952 Rasgrp4-205ENSMUST00000159975 2296 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Scn1bP97952 Gaa-203ENSMUST00000106259 3633 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Scn1bP97952 Cnbp-209ENSMUST00000204890 1614 ntAPPRIS ALT1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Scn1bP97952 Lyar-202ENSMUST00000114106 1504 ntAPPRIS P1 TSL 5 BASIC11.08□□□□□ -0.64
Scn1bP97952 Gm9361-201ENSMUST00000198695 1507 ntBASIC11.08□□□□□ -0.64
Scn1bP97952 Emp1-202ENSMUST00000111907 2763 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Scn1bP97952 Sfrp4-203ENSMUST00000222464 4049 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Scn1bP97952 Spats2l-211ENSMUST00000169772 2311 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Scn1bP97952 Tpst1-202ENSMUST00000118993 1867 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Scn1bP97952 Pif1-203ENSMUST00000134538 3395 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Scn1bP97952 Sectm1a-203ENSMUST00000106119 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC11.08□□□□□ -0.64
Scn1bP97952 Nmral1-203ENSMUST00000115851 1306 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Scn1bP97952 Fam149a-201ENSMUST00000093526 5469 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Scn1bP97952 Fnbp1-203ENSMUST00000100207 1680 ntTSL 5 BASIC11.08□□□□□ -0.64
Scn1bP97952 5033428I22Rik-201ENSMUST00000181638 2040 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Scn1bP97952 Hyal1-202ENSMUST00000112387 2706 ntAPPRIS ALT2 TSL 1 (best) BASIC11.08□□□□□ -0.64
Scn1bP97952 AU019823-201ENSMUST00000131351 3316 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Scn1bP97952 AU019823-205ENSMUST00000171462 3339 ntAPPRIS P1 TSL 3 BASIC11.07□□□□□ -0.64
Scn1bP97952 Zfp1-203ENSMUST00000212072 1930 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Scn1bP97952 Fam53a-203ENSMUST00000065162 8219 ntAPPRIS ALT2 TSL 1 (best) BASIC11.07□□□□□ -0.64
Scn1bP97952 Vps54-202ENSMUST00000109578 4273 ntAPPRIS ALT2 TSL 1 (best) BASIC11.07□□□□□ -0.64
Scn1bP97952 BC048403-201ENSMUST00000065600 3123 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Scn1bP97952 Aldoc-202ENSMUST00000102478 1700 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Scn1bP97952 Ramp1-201ENSMUST00000097648 2325 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Scn1bP97952 Rgs6-204ENSMUST00000185674 1362 ntTSL 5 BASIC11.07□□□□□ -0.64
Scn1bP97952 Tenm2-208ENSMUST00000163524 8668 ntAPPRIS P2 TSL 5 BASIC11.07□□□□□ -0.64
Scn1bP97952 Dclk1-204ENSMUST00000196745 7962 ntAPPRIS ALT2 TSL 1 (best) BASIC11.07□□□□□ -0.64
Scn1bP97952 Coro6-204ENSMUST00000102493 2804 ntAPPRIS ALT1 TSL 5 BASIC11.07□□□□□ -0.64
Retrieved 100 of 76,532 protein–RNA pairs in 33 ms