Protein–RNA interactions for Protein: P97390

Vps45, Vacuolar protein sorting-associated protein 45, mousemouse

Predictions only

Length 570 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps45P97390 Prc1-211ENSMUST00000174199 2128 ntTSL 5 BASIC12.59□□□□□ -0.39
Vps45P97390 Med25-211ENSMUST00000208551 2678 ntTSL 2 BASIC12.59□□□□□ -0.39
Vps45P97390 1700001L05Rik-201ENSMUST00000100370 2270 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Vps45P97390 Thap1-201ENSMUST00000036807 2295 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Vps45P97390 Atg2b-201ENSMUST00000041055 7546 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Vps45P97390 Kcnj5-203ENSMUST00000216033 2440 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Vps45P97390 Xrra1-202ENSMUST00000207855 1334 ntAPPRIS ALT2 TSL 5 BASIC12.59□□□□□ -0.39
Vps45P97390 Prickle1-202ENSMUST00000109255 4144 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Vps45P97390 Mtmr3-201ENSMUST00000040448 5534 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
Vps45P97390 Gm13142-201ENSMUST00000117213 1453 ntBASIC12.59□□□□□ -0.39
Vps45P97390 Eno3-206ENSMUST00000170716 1461 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Vps45P97390 Gm43908-201ENSMUST00000205074 1472 ntBASIC12.59□□□□□ -0.39
Vps45P97390 Gm4864-201ENSMUST00000219894 1461 ntBASIC12.59□□□□□ -0.39
Vps45P97390 Hmga1-203ENSMUST00000117600 1635 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
Vps45P97390 Dusp19-201ENSMUST00000028384 1632 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Vps45P97390 Gm16582-201ENSMUST00000159627 1930 ntTSL 1 (best) BASIC12.58□□□□□ -0.39
Vps45P97390 Nupl1-206ENSMUST00000225111 2936 ntBASIC12.58□□□□□ -0.39
Vps45P97390 Chrdl1-202ENSMUST00000074660 4096 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.39
Vps45P97390 Lnx1-209ENSMUST00000153543 2208 ntTSL 5 BASIC12.58□□□□□ -0.39
Vps45P97390 Camsap3-203ENSMUST00000207077 3832 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Vps45P97390 Git2-202ENSMUST00000086564 2984 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.4
Vps45P97390 Dtx1-201ENSMUST00000031607 4035 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Vps45P97390 Ankrd17-201ENSMUST00000014421 10458 ntAPPRIS P4 TSL 5 BASIC12.58□□□□□ -0.4
Vps45P97390 Atp2b2-203ENSMUST00000101045 8877 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.4
Vps45P97390 Mapt-204ENSMUST00000106992 5253 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Vps45P97390 Taf6l-202ENSMUST00000010249 848 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Vps45P97390 Gabpb1-204ENSMUST00000103227 2751 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.4
Vps45P97390 Gm11596-201ENSMUST00000105058 1079 ntAPPRIS P1 BASIC12.58□□□□□ -0.4
Vps45P97390 Fam110a-203ENSMUST00000109864 1591 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Vps45P97390 Kif2a-202ENSMUST00000117423 2023 ntTSL 5 BASIC12.58□□□□□ -0.4
Vps45P97390 n-R5s14-201ENSMUST00000122688 107 ntBASIC12.58□□□□□ -0.4
Vps45P97390 Pyy-202ENSMUST00000127381 529 ntAPPRIS ALT2 TSL 2 BASIC12.58□□□□□ -0.4
Vps45P97390 Gm15326-202ENSMUST00000128198 1422 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Vps45P97390 Tmem116-209ENSMUST00000156080 1184 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Vps45P97390 Gm16339-201ENSMUST00000160954 929 ntTSL 5 BASIC12.58□□□□□ -0.4
Vps45P97390 Iqcf6-201ENSMUST00000171091 537 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.4
Vps45P97390 Atg4c-203ENSMUST00000180278 2792 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.4
Vps45P97390 Gm27390-201ENSMUST00000184516 176 ntBASIC12.58□□□□□ -0.4
Vps45P97390 Gm34370-201ENSMUST00000209385 1410 ntTSL 5 BASIC12.58□□□□□ -0.4
Vps45P97390 Abhd14a-201ENSMUST00000048685 1256 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.4
Vps45P97390 2410015M20Rik-201ENSMUST00000052832 755 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Vps45P97390 Shbg-201ENSMUST00000005334 1419 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Vps45P97390 Styxl1-201ENSMUST00000053906 1582 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Vps45P97390 Slc25a40-201ENSMUST00000066921 2784 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Vps45P97390 Mill2-201ENSMUST00000072386 1121 ntAPPRIS P4 TSL 1 (best) BASIC12.58□□□□□ -0.4
Vps45P97390 Olfr117-201ENSMUST00000073636 954 ntAPPRIS P1 BASIC12.58□□□□□ -0.4
Vps45P97390 Olfr1413-201ENSMUST00000074859 1082 ntAPPRIS P1 BASIC12.58□□□□□ -0.4
Vps45P97390 Olfr130-201ENSMUST00000087129 954 ntAPPRIS P1 BASIC12.58□□□□□ -0.4
Vps45P97390 Olfr1428-201ENSMUST00000087824 945 ntAPPRIS P1 BASIC12.58□□□□□ -0.4
Vps45P97390 Gm6994-201ENSMUST00000088880 1163 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Vps45P97390 Paupar-201ENSMUST00000194826 3482 ntBASIC12.58□□□□□ -0.4
Vps45P97390 Dnajb1-202ENSMUST00000212300 2854 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Vps45P97390 Col14a1-203ENSMUST00000110221 5679 ntAPPRIS P2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Vps45P97390 Tubb2a-ps2-201ENSMUST00000221547 1339 ntBASIC12.58□□□□□ -0.4
Vps45P97390 Jrk-201ENSMUST00000050234 5853 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Vps45P97390 Mrgprg-201ENSMUST00000058092 1821 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Vps45P97390 Zufsp-201ENSMUST00000048222 2991 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Vps45P97390 Slc39a9-204ENSMUST00000217889 2155 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Vps45P97390 AL732309.1-201ENSMUST00000228627 2045 ntAPPRIS P1 BASIC12.57□□□□□ -0.4
Vps45P97390 Tapbp-201ENSMUST00000025161 2894 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Vps45P97390 Nckipsd-201ENSMUST00000035218 3360 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Vps45P97390 Rasgef1a-202ENSMUST00000203482 2227 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
Vps45P97390 Nfya-212ENSMUST00000162460 3706 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
Vps45P97390 Tardbp-204ENSMUST00000105699 1904 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Vps45P97390 Gm42706-201ENSMUST00000199733 1910 ntBASIC12.57□□□□□ -0.4
Vps45P97390 Kif13b-201ENSMUST00000100473 5603 ntAPPRIS P2 TSL 5 BASIC12.57□□□□□ -0.4
Vps45P97390 Sox7-201ENSMUST00000079652 3299 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Vps45P97390 AC159314.1-201ENSMUST00000216917 3485 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Vps45P97390 Gm24934-201ENSMUST00000103764 111 ntBASIC12.57□□□□□ -0.4
Vps45P97390 Gm13611-201ENSMUST00000118269 318 ntBASIC12.57□□□□□ -0.4
Vps45P97390 Gm13996-201ENSMUST00000118456 430 ntBASIC12.57□□□□□ -0.4
Vps45P97390 Gm14597-202ENSMUST00000129769 715 ntAPPRIS P5 TSL 3 BASIC12.57□□□□□ -0.4
Vps45P97390 Gm14051-201ENSMUST00000131603 377 ntTSL 3 BASIC12.57□□□□□ -0.4
Vps45P97390 Rps19-ps11-201ENSMUST00000160308 433 ntBASIC12.57□□□□□ -0.4
Vps45P97390 Gm17227-202ENSMUST00000170286 1016 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Vps45P97390 Gm26740-201ENSMUST00000180456 358 ntTSL 3 BASIC12.57□□□□□ -0.4
Vps45P97390 4930589O11Rik-201ENSMUST00000200768 920 ntBASIC12.57□□□□□ -0.4
Vps45P97390 Calml4-207ENSMUST00000215968 526 ntTSL 2 BASIC12.57□□□□□ -0.4
Vps45P97390 Gm10702-201ENSMUST00000098929 1268 ntBASIC12.57□□□□□ -0.4
Vps45P97390 Pjvk-201ENSMUST00000099986 1219 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Vps45P97390 Patj-201ENSMUST00000030290 2495 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Vps45P97390 Zfp341-202ENSMUST00000109702 3162 ntAPPRIS ALT2 TSL 5 BASIC12.57□□□□□ -0.4
Vps45P97390 Ripk3-202ENSMUST00000168716 1964 ntTSL 5 BASIC12.57□□□□□ -0.4
Vps45P97390 Hipk3-201ENSMUST00000028600 7454 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Vps45P97390 Sidt1-205ENSMUST00000136381 4404 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
Vps45P97390 Tsku-203ENSMUST00000165257 2514 ntAPPRIS P1 TSL 2 BASIC12.57□□□□□ -0.4
Vps45P97390 Rspo3-201ENSMUST00000092623 3085 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Vps45P97390 Actg2-201ENSMUST00000075161 1333 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Vps45P97390 Gm42890-202ENSMUST00000167642 2566 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Vps45P97390 Tgfbr2-201ENSMUST00000035014 3476 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Vps45P97390 Nyap1-202ENSMUST00000118326 4565 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
Vps45P97390 Elf1-201ENSMUST00000040131 4235 ntAPPRIS P2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Vps45P97390 Rps6kb1-207ENSMUST00000154617 5531 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Vps45P97390 Srp54a-202ENSMUST00000220578 4498 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Vps45P97390 Actb-201ENSMUST00000100497 1920 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Vps45P97390 Prkar1b-202ENSMUST00000110889 2457 ntTSL 5 BASIC12.56□□□□□ -0.4
Vps45P97390 Grk4-202ENSMUST00000074651 3234 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Vps45P97390 Mtus2-203ENSMUST00000085558 7543 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Vps45P97390 Sgk1-204ENSMUST00000120509 3096 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Vps45P97390 Heatr3-202ENSMUST00000121949 3086 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 34.6 ms