Protein–RNA interactions for Protein: P97334

Nkx2-3, Homeobox protein Nkx-2.3, mousemouse

Predictions only

Length 362 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-3P97334 Gm7224-201ENSMUST00000121359 2066 ntBASIC15.19■□□□□ 0.02
Nkx2-3P97334 Ppp2r5c-201ENSMUST00000084985 1847 ntAPPRIS P1 TSL 2 BASIC15.19■□□□□ 0.02
Nkx2-3P97334 Akap17b-201ENSMUST00000051906 6003 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
Nkx2-3P97334 Pank4-202ENSMUST00000070953 2706 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Nkx2-3P97334 Car10-201ENSMUST00000042943 3293 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Nkx2-3P97334 Kcnt1-204ENSMUST00000114176 4166 ntAPPRIS ALT2 TSL 5 BASIC15.19■□□□□ 0.02
Nkx2-3P97334 Slc29a2-201ENSMUST00000025826 2472 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Nkx2-3P97334 Tspyl5-201ENSMUST00000042021 4010 ntAPPRIS P1 BASIC15.19■□□□□ 0.02
Nkx2-3P97334 Gm20700-201ENSMUST00000176749 2206 ntTSL 3 BASIC15.19■□□□□ 0.02
Nkx2-3P97334 Foxd4-201ENSMUST00000058600 2345 ntAPPRIS P1 BASIC15.18■□□□□ 0.02
Nkx2-3P97334 Adora1-201ENSMUST00000038191 3625 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Nkx2-3P97334 Gspt1-205ENSMUST00000167571 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Nkx2-3P97334 Cad-206ENSMUST00000201838 3153 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Nkx2-3P97334 Btaf1-201ENSMUST00000099494 7204 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Nkx2-3P97334 Fndc8-201ENSMUST00000018988 2166 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Nkx2-3P97334 1110059E24Rik-201ENSMUST00000038830 1614 ntAPPRIS P2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Nkx2-3P97334 Pard3-222ENSMUST00000162536 5175 ntAPPRIS ALT2 TSL 5 BASIC15.18■□□□□ 0.02
Nkx2-3P97334 Dlc1-203ENSMUST00000098826 6241 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Nkx2-3P97334 Akr1b10-202ENSMUST00000115051 1022 ntTSL 5 BASIC15.18■□□□□ 0.02
Nkx2-3P97334 Rsph14-206ENSMUST00000166088 1203 ntAPPRIS P4 TSL 5 BASIC15.18■□□□□ 0.02
Nkx2-3P97334 Rwdd2a-202ENSMUST00000179212 1130 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Nkx2-3P97334 Rsph14-207ENSMUST00000179546 1190 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Nkx2-3P97334 Ccl19-ps3-201ENSMUST00000179634 324 ntBASIC15.18■□□□□ 0.02
Nkx2-3P97334 Gm12407-201ENSMUST00000180219 324 ntBASIC15.18■□□□□ 0.02
Nkx2-3P97334 Gm29418-201ENSMUST00000186162 647 ntTSL 5 BASIC15.18■□□□□ 0.02
Nkx2-3P97334 Ptbp2-210ENSMUST00000198403 389 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Nkx2-3P97334 Gm6450-201ENSMUST00000200896 574 ntBASIC15.18■□□□□ 0.02
Nkx2-3P97334 Gm8342-201ENSMUST00000209839 757 ntBASIC15.18■□□□□ 0.02
Nkx2-3P97334 Npff-201ENSMUST00000023814 540 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Nkx2-3P97334 H1foo-201ENSMUST00000037831 1113 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
Nkx2-3P97334 Sst-201ENSMUST00000004480 599 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Nkx2-3P97334 Krtap4-2-201ENSMUST00000058987 974 ntAPPRIS P1 BASIC15.18■□□□□ 0.02
Nkx2-3P97334 Try10-201ENSMUST00000072103 860 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Nkx2-3P97334 Rpl9-ps6-201ENSMUST00000078034 691 ntAPPRIS P1 BASIC15.18■□□□□ 0.02
Nkx2-3P97334 Rsph14-201ENSMUST00000009214 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Nkx2-3P97334 Tsc22d2-201ENSMUST00000099090 9799 ntAPPRIS P3 TSL 3 BASIC15.18■□□□□ 0.02
Nkx2-3P97334 Edc4-201ENSMUST00000040254 4780 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Nkx2-3P97334 Snhg18-201ENSMUST00000181536 1486 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Nkx2-3P97334 Enpp5-201ENSMUST00000024756 2534 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Nkx2-3P97334 Hnrnpc-206ENSMUST00000227458 1683 ntAPPRIS ALT1 BASIC15.18■□□□□ 0.02
Nkx2-3P97334 Zer1-202ENSMUST00000113677 4189 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Nkx2-3P97334 Yes1-201ENSMUST00000072311 4586 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Nkx2-3P97334 Kdm6a-201ENSMUST00000044484 5918 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
Nkx2-3P97334 Kdm6a-202ENSMUST00000052368 5935 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Nkx2-3P97334 Myoc-201ENSMUST00000028020 2074 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Nkx2-3P97334 Tbx3-201ENSMUST00000018748 4856 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Nkx2-3P97334 Immt-202ENSMUST00000101301 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Nkx2-3P97334 C130026L21Rik-201ENSMUST00000064930 2472 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Nkx2-3P97334 2810403A07Rik-201ENSMUST00000029696 2981 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Nkx2-3P97334 E330009J07Rik-202ENSMUST00000101492 6742 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Nkx2-3P97334 Ckmt1-201ENSMUST00000000317 1620 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Nkx2-3P97334 Gabrr2-202ENSMUST00000108162 1933 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Nkx2-3P97334 Reep2-201ENSMUST00000043484 1926 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Nkx2-3P97334 Prkcd-204ENSMUST00000112206 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Nkx2-3P97334 Shroom3-203ENSMUST00000113055 6765 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Nkx2-3P97334 Rab31-201ENSMUST00000070673 3476 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Nkx2-3P97334 Rbm5-201ENSMUST00000035199 3064 ntAPPRIS ALT1 TSL 5 BASIC15.17■□□□□ 0.02
Nkx2-3P97334 Irak2-202ENSMUST00000089022 2974 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Nkx2-3P97334 Mccc1os-202ENSMUST00000137198 2686 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Nkx2-3P97334 Kifc1-201ENSMUST00000114361 2260 ntAPPRIS ALT2 TSL 5 BASIC15.17■□□□□ 0.02
Nkx2-3P97334 Tbrg1-201ENSMUST00000117654 1984 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Nkx2-3P97334 Gm17435-202ENSMUST00000212699 1998 ntBASIC15.17■□□□□ 0.02
Nkx2-3P97334 Gm15172-201ENSMUST00000118945 1046 ntBASIC15.17■□□□□ 0.02
Nkx2-3P97334 Gm14397-201ENSMUST00000124728 576 ntTSL 3 BASIC15.17■□□□□ 0.02
Nkx2-3P97334 Gm15985-201ENSMUST00000137731 343 ntTSL 3 BASIC15.17■□□□□ 0.02
Nkx2-3P97334 Smim5-202ENSMUST00000142089 685 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Nkx2-3P97334 4931406G06Rik-201ENSMUST00000147848 1252 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Nkx2-3P97334 Elof1-202ENSMUST00000166335 1053 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Nkx2-3P97334 Coa3-202ENSMUST00000168089 291 ntTSL 3 BASIC15.17■□□□□ 0.02
Nkx2-3P97334 Gm27241-202ENSMUST00000185013 570 ntTSL 2 BASIC15.17■□□□□ 0.02
Nkx2-3P97334 Gm44124-201ENSMUST00000204159 472 ntBASIC15.17■□□□□ 0.02
Nkx2-3P97334 Gm44506-201ENSMUST00000206278 965 ntBASIC15.17■□□□□ 0.02
Nkx2-3P97334 Gm45460-201ENSMUST00000211385 1038 ntTSL 5 BASIC15.17■□□□□ 0.02
Nkx2-3P97334 Cdk19os-201ENSMUST00000044774 534 ntTSL 5 BASIC15.17■□□□□ 0.02
Nkx2-3P97334 Rpl15-201ENSMUST00000079419 883 ntAPPRIS P1 TSL 2 BASIC15.17■□□□□ 0.02
Nkx2-3P97334 Rbm39-201ENSMUST00000029149 2711 ntAPPRIS ALT1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Nkx2-3P97334 Siglecf-203ENSMUST00000122423 2607 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
Nkx2-3P97334 Chmp4c-201ENSMUST00000029049 6188 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Nkx2-3P97334 Foxo3-203ENSMUST00000105502 6848 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Nkx2-3P97334 Slc16a3-208ENSMUST00000168579 4335 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Nkx2-3P97334 Heatr3-202ENSMUST00000121949 3086 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Nkx2-3P97334 Gm12802-201ENSMUST00000145510 1813 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Nkx2-3P97334 Rnf182-201ENSMUST00000059986 3544 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Nkx2-3P97334 Nphs1os-201ENSMUST00000152625 1339 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Nkx2-3P97334 Pde4d-201ENSMUST00000074103 2167 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Nkx2-3P97334 Specc1-212ENSMUST00000202178 2932 ntTSL 5 BASIC15.16■□□□□ 0.02
Nkx2-3P97334 Ankrd42-205ENSMUST00000138267 2827 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Nkx2-3P97334 Ptgr2-208ENSMUST00000147363 1869 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Nkx2-3P97334 Taf6-202ENSMUST00000110936 2308 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Nkx2-3P97334 Mtf2-201ENSMUST00000081567 4060 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Nkx2-3P97334 Tubgcp3-201ENSMUST00000000776 3797 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Nkx2-3P97334 Snai2-201ENSMUST00000023356 2031 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Nkx2-3P97334 Drc1-201ENSMUST00000101448 2471 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Nkx2-3P97334 C130026I21Rik-202ENSMUST00000093506 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Nkx2-3P97334 Setdb1-203ENSMUST00000107171 4573 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Nkx2-3P97334 Rs1-202ENSMUST00000112368 731 ntTSL 3 BASIC15.16■□□□□ 0.02
Nkx2-3P97334 Gm12795-201ENSMUST00000117594 539 ntBASIC15.16■□□□□ 0.02
Nkx2-3P97334 Gm16397-201ENSMUST00000122201 494 ntBASIC15.16■□□□□ 0.02
Nkx2-3P97334 n-R5s84-201ENSMUST00000122591 109 ntBASIC15.16■□□□□ 0.02
Nkx2-3P97334 Treml4-202ENSMUST00000125426 992 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Retrieved 100 of 76,532 protein–RNA pairs in 32.7 ms