Protein–RNA interactions for Protein: P86449

Trim43c, Tripartite motif-containing protein 43C, mousemouse

Predictions only

Length 446 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim43cP86449 Lpar1-205ENSMUST00000107575 3421 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.3
Trim43cP86449 Bckdk-201ENSMUST00000071056 3405 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Trim43cP86449 Epb41l2-207ENSMUST00000218903 4115 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.3
Trim43cP86449 Kcna10-201ENSMUST00000055064 1913 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Trim43cP86449 Map7-202ENSMUST00000116259 3831 ntAPPRIS P2 TSL 1 (best) BASIC13.21□□□□□ -0.3
Trim43cP86449 Map3k11-201ENSMUST00000004156 3801 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Trim43cP86449 Gm32036-201ENSMUST00000221484 2638 ntTSL 2 BASIC13.21□□□□□ -0.3
Trim43cP86449 Reps1-201ENSMUST00000126390 2595 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.3
Trim43cP86449 Arhgap27-204ENSMUST00000107024 3976 ntAPPRIS ALT2 TSL 5 BASIC13.21□□□□□ -0.3
Trim43cP86449 Cars-201ENSMUST00000010899 3222 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trim43cP86449 Pik3r6-201ENSMUST00000060441 3237 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trim43cP86449 Tomt-202ENSMUST00000106970 1354 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trim43cP86449 Gm9796-201ENSMUST00000062249 2250 ntBASIC13.2□□□□□ -0.3
Trim43cP86449 Ankzf1-208ENSMUST00000152233 2739 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trim43cP86449 Gm9544-201ENSMUST00000223349 2482 ntBASIC13.2□□□□□ -0.3
Trim43cP86449 Atp2b2-203ENSMUST00000101045 8877 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trim43cP86449 Th-202ENSMUST00000105929 1950 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Trim43cP86449 Zc3hc1-203ENSMUST00000115184 1504 ntTSL 5 BASIC13.2□□□□□ -0.3
Trim43cP86449 Lims1-202ENSMUST00000020078 4327 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trim43cP86449 Traf7-201ENSMUST00000070777 2384 ntTSL 5 BASIC13.2□□□□□ -0.3
Trim43cP86449 Vax2os-203ENSMUST00000155159 4063 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Trim43cP86449 Tmod4-202ENSMUST00000107227 1260 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
Trim43cP86449 Chchd7-202ENSMUST00000108386 524 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trim43cP86449 Hsd17b10-202ENSMUST00000112617 992 ntTSL 5 BASIC13.2□□□□□ -0.3
Trim43cP86449 Gm13350-201ENSMUST00000120519 479 ntBASIC13.2□□□□□ -0.3
Trim43cP86449 Chchd7-206ENSMUST00000121110 381 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
Trim43cP86449 Gm13133-201ENSMUST00000143888 736 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Trim43cP86449 Cdk3-ps-202ENSMUST00000174177 915 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
Trim43cP86449 Gm27046-201ENSMUST00000182160 463 ntBASIC13.2□□□□□ -0.3
Trim43cP86449 Gm43438-201ENSMUST00000198133 379 ntBASIC13.2□□□□□ -0.3
Trim43cP86449 Gm45224-201ENSMUST00000208203 414 ntBASIC13.2□□□□□ -0.3
Trim43cP86449 Nanos3-202ENSMUST00000210202 692 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trim43cP86449 Gm13097-201ENSMUST00000210722 397 ntBASIC13.2□□□□□ -0.3
Trim43cP86449 Gm45799-208ENSMUST00000211054 490 ntAPPRIS P2 TSL 3 BASIC13.2□□□□□ -0.3
Trim43cP86449 Gm3898-202ENSMUST00000216905 328 ntTSL 2 BASIC13.2□□□□□ -0.3
Trim43cP86449 Hsd17b10-201ENSMUST00000026289 962 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trim43cP86449 Tubgcp2-201ENSMUST00000026547 2960 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trim43cP86449 Tmem14a-202ENSMUST00000027065 1168 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trim43cP86449 Cks1b-201ENSMUST00000029679 849 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trim43cP86449 Scgb3a2-201ENSMUST00000043803 842 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Trim43cP86449 Pxt1-201ENSMUST00000051526 710 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trim43cP86449 Ifi27-203ENSMUST00000076788 708 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trim43cP86449 Sidt1-205ENSMUST00000136381 4404 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trim43cP86449 Tmem269-201ENSMUST00000030394 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trim43cP86449 Ntpcr-202ENSMUST00000065135 1497 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Trim43cP86449 Gm44152-201ENSMUST00000205007 1691 ntBASIC13.2□□□□□ -0.3
Trim43cP86449 Rad51ap1-202ENSMUST00000112221 1871 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trim43cP86449 Cd300lf-201ENSMUST00000051264 1864 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trim43cP86449 Fam45a-202ENSMUST00000119633 2267 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Trim43cP86449 Nfasc-207ENSMUST00000187861 4927 ntTSL 5 BASIC13.2□□□□□ -0.3
Trim43cP86449 Srr-201ENSMUST00000065211 3699 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trim43cP86449 Sgce-209ENSMUST00000133306 1619 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Trim43cP86449 Gm2670-201ENSMUST00000180668 2804 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Trim43cP86449 Ikbip-201ENSMUST00000020149 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trim43cP86449 Tex9-209ENSMUST00000184125 2794 ntAPPRIS P2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trim43cP86449 Kdelr1-205ENSMUST00000211716 1350 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Trim43cP86449 Sowahb-201ENSMUST00000061328 3900 ntAPPRIS P1 BASIC13.2□□□□□ -0.3
Trim43cP86449 Gm44806-201ENSMUST00000205574 2303 ntBASIC13.19□□□□□ -0.3
Trim43cP86449 Sf1-208ENSMUST00000131252 4353 ntAPPRIS P4 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trim43cP86449 Arhgef3-204ENSMUST00000225949 3198 ntBASIC13.19□□□□□ -0.3
Trim43cP86449 Atp9a-201ENSMUST00000029060 3529 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trim43cP86449 Lcp2-202ENSMUST00000109329 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trim43cP86449 Eif4a2-223ENSMUST00000168891 2203 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Trim43cP86449 Nrxn1-202ENSMUST00000072671 8118 ntTSL 5 BASIC13.19□□□□□ -0.3
Trim43cP86449 Ppp6r3-202ENSMUST00000113997 4952 ntAPPRIS ALT1 TSL 5 BASIC13.19□□□□□ -0.3
Trim43cP86449 H2-Q1-201ENSMUST00000073208 2024 ntAPPRIS P2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trim43cP86449 Nemp1-203ENSMUST00000118728 2362 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trim43cP86449 C330007P06Rik-203ENSMUST00000115249 1145 ntTSL 5 BASIC13.19□□□□□ -0.3
Trim43cP86449 Gm11989-201ENSMUST00000117240 672 ntBASIC13.19□□□□□ -0.3
Trim43cP86449 Gm11362-201ENSMUST00000118838 850 ntBASIC13.19□□□□□ -0.3
Trim43cP86449 Spata3-210ENSMUST00000153247 884 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Trim43cP86449 Gm17376-201ENSMUST00000166016 84 ntBASIC13.19□□□□□ -0.3
Trim43cP86449 Gm20537-202ENSMUST00000173131 889 ntAPPRIS P5 TSL 5 BASIC13.19□□□□□ -0.3
Trim43cP86449 Hax1-205ENSMUST00000197767 1092 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
Trim43cP86449 Gm26953-204ENSMUST00000212526 553 ntTSL 5 BASIC13.19□□□□□ -0.3
Trim43cP86449 4930578I06Rik-201ENSMUST00000022532 1033 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trim43cP86449 AC161537.1-201ENSMUST00000226199 1015 ntBASIC13.19□□□□□ -0.3
Trim43cP86449 Tmem50a-201ENSMUST00000030626 1204 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trim43cP86449 H1foo-201ENSMUST00000037831 1113 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trim43cP86449 Odf4-201ENSMUST00000038932 1078 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trim43cP86449 Fen1-203ENSMUST00000142241 2152 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trim43cP86449 Aebp2-206ENSMUST00000161335 2524 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trim43cP86449 Ppfia4-205ENSMUST00000189361 5238 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
Trim43cP86449 Pxdn-202ENSMUST00000122328 6614 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trim43cP86449 Gm36855-203ENSMUST00000216660 1406 ntTSL 5 BASIC13.19□□□□□ -0.3
Trim43cP86449 AC171277.1-201ENSMUST00000216902 1441 ntBASIC13.19□□□□□ -0.3
Trim43cP86449 Cacna1c-225ENSMUST00000219223 7483 ntTSL 5 BASIC13.19□□□□□ -0.3
Trim43cP86449 Slc38a6-206ENSMUST00000140523 3032 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trim43cP86449 Gm43760-201ENSMUST00000202120 3015 ntBASIC13.19□□□□□ -0.3
Trim43cP86449 Pop4-201ENSMUST00000032585 2113 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trim43cP86449 Tnks1bp1-201ENSMUST00000048400 4799 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trim43cP86449 Gm17276-201ENSMUST00000180839 2782 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Trim43cP86449 4732414G09Rik-201ENSMUST00000156243 2422 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Trim43cP86449 A630076J17Rik-201ENSMUST00000179399 1358 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trim43cP86449 Sidt1-201ENSMUST00000047446 4279 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trim43cP86449 Sntb1-201ENSMUST00000039769 4919 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trim43cP86449 Capn2-201ENSMUST00000068505 3225 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trim43cP86449 Ikzf1-201ENSMUST00000018798 1542 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Trim43cP86449 Enah-201ENSMUST00000078719 2889 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trim43cP86449 Serpinf2-202ENSMUST00000108437 2179 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 92.5 ms