Protein–RNA interactions for Protein: P82347

Sgcd, Delta-sarcoglycan, mousemouse

Predictions only

Length 289 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SgcdP82347 Zfyve1-203ENSMUST00000221919 4420 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
SgcdP82347 Mki67-201ENSMUST00000033310 10061 ntAPPRIS P1 TSL 5 BASIC11.33□□□□□ -0.6
SgcdP82347 Nfe2l1-211ENSMUST00000167149 4596 ntAPPRIS P3 TSL 1 (best) BASIC11.33□□□□□ -0.6
SgcdP82347 Tmem17-201ENSMUST00000059319 1568 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
SgcdP82347 Ephx3-201ENSMUST00000087721 2416 ntAPPRIS P3 TSL 1 (best) BASIC11.33□□□□□ -0.6
SgcdP82347 Rit2-203ENSMUST00000153060 1806 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
SgcdP82347 Edc4-202ENSMUST00000119261 4645 ntAPPRIS P3 TSL 1 (best) BASIC11.32□□□□□ -0.6
SgcdP82347 Lamb3-209ENSMUST00000194677 4867 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
SgcdP82347 Abhd6-203ENSMUST00000225234 1958 ntBASIC11.32□□□□□ -0.6
SgcdP82347 Gm26543-201ENSMUST00000180729 2221 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
SgcdP82347 Sephs1-201ENSMUST00000027973 5319 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
SgcdP82347 Arfgap1-201ENSMUST00000029092 2714 ntAPPRIS P3 TSL 1 (best) BASIC11.32□□□□□ -0.6
SgcdP82347 Slc36a1-202ENSMUST00000108867 1611 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
SgcdP82347 Nrf1-207ENSMUST00000115206 1879 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
SgcdP82347 Gm5380-201ENSMUST00000119296 2136 ntBASIC11.32□□□□□ -0.6
SgcdP82347 Psmb9-204ENSMUST00000174576 1351 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
SgcdP82347 Bckdhb-205ENSMUST00000190166 1398 ntAPPRIS P3 TSL 1 (best) BASIC11.32□□□□□ -0.6
SgcdP82347 Astn1-211ENSMUST00000195311 3642 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
SgcdP82347 Nap1l1-203ENSMUST00000217908 1350 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
SgcdP82347 Itga4-201ENSMUST00000099972 9767 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
SgcdP82347 Nol4-204ENSMUST00000097651 4549 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
SgcdP82347 Avpr2-202ENSMUST00000101470 2787 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
SgcdP82347 Rnf170-201ENSMUST00000014022 3929 ntAPPRIS P2 TSL 1 (best) BASIC11.32□□□□□ -0.6
SgcdP82347 Spata13-207ENSMUST00000160973 7467 ntAPPRIS P3 TSL 1 (best) BASIC11.32□□□□□ -0.6
SgcdP82347 Dctn4-202ENSMUST00000223590 1530 ntBASIC11.32□□□□□ -0.6
SgcdP82347 Ociad1-201ENSMUST00000031038 1523 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
SgcdP82347 Gm37447-201ENSMUST00000195625 2928 ntBASIC11.32□□□□□ -0.6
SgcdP82347 Armc2-208ENSMUST00000162405 1135 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
SgcdP82347 Agtpbp1-213ENSMUST00000167096 508 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
SgcdP82347 Fcrl1-204ENSMUST00000191666 925 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
SgcdP82347 Nme2-201ENSMUST00000021217 1012 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
SgcdP82347 Gm6013-201ENSMUST00000212264 699 ntBASIC11.32□□□□□ -0.6
SgcdP82347 Gm11427-203ENSMUST00000215482 1203 ntTSL 5 BASIC11.32□□□□□ -0.6
SgcdP82347 Gm7172-201ENSMUST00000218047 1152 ntBASIC11.32□□□□□ -0.6
SgcdP82347 Cox7a2-201ENSMUST00000034881 659 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
SgcdP82347 Pros1-201ENSMUST00000023629 3303 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
SgcdP82347 Eif4g1-217ENSMUST00000143939 5114 ntAPPRIS ALT2 TSL 5 BASIC11.32□□□□□ -0.6
SgcdP82347 Acly-201ENSMUST00000007131 4393 ntAPPRIS P3 TSL 1 (best) BASIC11.32□□□□□ -0.6
SgcdP82347 Tcf25-202ENSMUST00000108840 2582 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
SgcdP82347 Apol7a-201ENSMUST00000010745 1431 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
SgcdP82347 Gm45338-207ENSMUST00000211499 1405 ntTSL 5 BASIC11.32□□□□□ -0.6
SgcdP82347 Nfic-203ENSMUST00000105321 6237 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
SgcdP82347 Ddx55-202ENSMUST00000111438 2737 ntTSL 2 BASIC11.32□□□□□ -0.6
SgcdP82347 Emp1-201ENSMUST00000032330 2721 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
SgcdP82347 Dhx30-212ENSMUST00000197928 4441 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
SgcdP82347 Hnrnpm-206ENSMUST00000148178 3934 ntAPPRIS P3 TSL 1 (best) BASIC11.32□□□□□ -0.6
SgcdP82347 Abi1-209ENSMUST00000140164 3403 ntAPPRIS ALT1 TSL 1 (best) BASIC11.32□□□□□ -0.6
SgcdP82347 Rtn3-202ENSMUST00000065304 5030 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
SgcdP82347 Gm13050-201ENSMUST00000122149 1345 ntBASIC11.32□□□□□ -0.6
SgcdP82347 Gm14169-201ENSMUST00000124676 2519 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
SgcdP82347 Arap1-202ENSMUST00000084896 4926 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
SgcdP82347 Arfgap1-204ENSMUST00000108861 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
SgcdP82347 AC164099.2-201ENSMUST00000227795 2005 ntAPPRIS P1 BASIC11.31□□□□□ -0.6
SgcdP82347 Kcnd1-201ENSMUST00000009875 5287 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
SgcdP82347 Pcdh15-238ENSMUST00000193739 5034 ntAPPRIS ALT2 TSL 5 BASIC11.31□□□□□ -0.6
SgcdP82347 Knop1-206ENSMUST00000126792 3253 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
SgcdP82347 Gm43858-201ENSMUST00000199418 1778 ntBASIC11.31□□□□□ -0.6
SgcdP82347 Aff3-203ENSMUST00000095027 5857 ntAPPRIS P2 TSL 5 BASIC11.31□□□□□ -0.6
SgcdP82347 Add1-202ENSMUST00000052836 2337 ntAPPRIS ALT2 TSL 5 BASIC11.31□□□□□ -0.6
SgcdP82347 Jmjd1c-211ENSMUST00000174408 8377 ntAPPRIS ALT2 TSL 5 BASIC11.31□□□□□ -0.6
SgcdP82347 Jmjd1c-201ENSMUST00000051446 8382 ntAPPRIS P4 TSL 5 BASIC11.31□□□□□ -0.6
SgcdP82347 Gm17281-201ENSMUST00000180732 3589 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
SgcdP82347 Gm6211-201ENSMUST00000147973 4275 ntBASIC11.31□□□□□ -0.6
SgcdP82347 AC169511.2-201ENSMUST00000226674 2063 ntBASIC11.31□□□□□ -0.6
SgcdP82347 Zfp866-202ENSMUST00000137573 3245 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
SgcdP82347 Osgin1-201ENSMUST00000098365 1959 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
SgcdP82347 R3hdml-201ENSMUST00000109416 1094 ntAPPRIS P1 TSL 5 BASIC11.31□□□□□ -0.6
SgcdP82347 Gm17077-201ENSMUST00000133179 279 ntTSL 5 BASIC11.31□□□□□ -0.6
SgcdP82347 Gm20521-201ENSMUST00000134077 1245 ntAPPRIS P1 TSL 5 BASIC11.31□□□□□ -0.6
SgcdP82347 Gm12984-201ENSMUST00000145711 273 ntTSL 5 BASIC11.31□□□□□ -0.6
SgcdP82347 Gm24644-201ENSMUST00000157114 139 ntBASIC11.31□□□□□ -0.6
SgcdP82347 Inpp4a-211ENSMUST00000168546 2964 ntTSL 5 BASIC11.31□□□□□ -0.6
SgcdP82347 1600014C10Rik-203ENSMUST00000177983 403 ntTSL 2 BASIC11.31□□□□□ -0.6
SgcdP82347 Gm29127-201ENSMUST00000188304 517 ntBASIC11.31□□□□□ -0.6
SgcdP82347 9130604C24Rik-201ENSMUST00000197965 956 ntBASIC11.31□□□□□ -0.6
SgcdP82347 Srgn-201ENSMUST00000020271 938 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
SgcdP82347 Gm20083-202ENSMUST00000206663 1008 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
SgcdP82347 Gm45880-201ENSMUST00000213041 853 ntBASIC11.31□□□□□ -0.6
SgcdP82347 Gm6983-201ENSMUST00000214912 628 ntBASIC11.31□□□□□ -0.6
SgcdP82347 AC153845.2-201ENSMUST00000217535 673 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
SgcdP82347 Recql-201ENSMUST00000032370 2112 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
SgcdP82347 Gm9955-201ENSMUST00000067987 309 ntAPPRIS P1 BASIC11.31□□□□□ -0.6
SgcdP82347 Mdk-203ENSMUST00000090602 714 ntAPPRIS P1 TSL 5 BASIC11.31□□□□□ -0.6
SgcdP82347 Rnf17-201ENSMUST00000095793 5264 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
SgcdP82347 Dbh-201ENSMUST00000000910 2552 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
SgcdP82347 Phf21a-209ENSMUST00000111297 6188 ntAPPRIS ALT2 TSL 5 BASIC11.31□□□□□ -0.6
SgcdP82347 Phf21a-201ENSMUST00000044036 6187 ntAPPRIS ALT2 TSL 5 BASIC11.31□□□□□ -0.6
SgcdP82347 Txndc2-201ENSMUST00000050236 1899 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
SgcdP82347 Eya2-201ENSMUST00000063433 2460 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
SgcdP82347 Rad54l-202ENSMUST00000102705 2780 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
SgcdP82347 Ankrd42-201ENSMUST00000056106 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
SgcdP82347 Calm1-202ENSMUST00000110082 4115 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
SgcdP82347 Yif1a-201ENSMUST00000025811 1493 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
SgcdP82347 Mast1-202ENSMUST00000119820 2078 ntTSL 5 BASIC11.31□□□□□ -0.6
SgcdP82347 Lgr5-206ENSMUST00000172806 2652 ntTSL 5 BASIC11.31□□□□□ -0.6
SgcdP82347 Exosc10-202ENSMUST00000076022 2682 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
SgcdP82347 Gm37580-201ENSMUST00000192408 2800 ntBASIC11.31□□□□□ -0.6
SgcdP82347 Mfsd4b5-202ENSMUST00000073618 2978 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
SgcdP82347 Trub2-201ENSMUST00000048044 3408 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
SgcdP82347 Cog3-203ENSMUST00000227473 4197 ntBASIC11.31□□□□□ -0.6
Retrieved 100 of 76,532 protein–RNA pairs in 30.6 ms