Protein–RNA interactions for Protein: P70390

Shox2, Short stature homeobox protein 2, mousemouse

Predictions only

Length 331 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shox2P70390 Bin2-205ENSMUST00000182814 1901 ntTSL 5 BASIC11.98□□□□□ -0.49
Shox2P70390 Chil1-207ENSMUST00000153856 1839 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Shox2P70390 Nop16-201ENSMUST00000026987 1756 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Shox2P70390 Npy5r-203ENSMUST00000212563 1747 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Shox2P70390 Kcnn3-201ENSMUST00000000811 2884 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Shox2P70390 Hdac7-201ENSMUST00000079838 3985 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Shox2P70390 Slc39a14-202ENSMUST00000068044 4926 ntAPPRIS P3 TSL 5 BASIC11.97□□□□□ -0.49
Shox2P70390 Gm13293-201ENSMUST00000131188 1615 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Shox2P70390 Gm26878-201ENSMUST00000181778 1644 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Shox2P70390 Ephb2-203ENSMUST00000105846 3653 ntAPPRIS ALT2 TSL 5 BASIC11.97□□□□□ -0.49
Shox2P70390 Rbm8a-202ENSMUST00000196456 2604 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Shox2P70390 Rbm8a-206ENSMUST00000200647 2620 ntTSL 2 BASIC11.97□□□□□ -0.49
Shox2P70390 Cpn2-201ENSMUST00000064856 4583 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Shox2P70390 AI854703-201ENSMUST00000095938 3517 ntAPPRIS P1 TSL 2 BASIC11.97□□□□□ -0.49
Shox2P70390 Nol4-204ENSMUST00000097651 4549 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Shox2P70390 Rnf152-202ENSMUST00000172299 8406 ntAPPRIS P1 TSL 2 BASIC11.97□□□□□ -0.49
Shox2P70390 Sema6d-206ENSMUST00000103239 6225 ntAPPRIS P4 TSL 5 BASIC11.97□□□□□ -0.49
Shox2P70390 Cant1-206ENSMUST00000164927 1379 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Shox2P70390 Gm45342-201ENSMUST00000210903 1363 ntBASIC11.97□□□□□ -0.49
Shox2P70390 Vps18-201ENSMUST00000037280 4054 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Shox2P70390 Rsbn1l-202ENSMUST00000196780 7651 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Shox2P70390 Hsd17b13-202ENSMUST00000112803 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Shox2P70390 Sgf29-201ENSMUST00000032956 1312 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Shox2P70390 2410131K14Rik-201ENSMUST00000049138 5649 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Shox2P70390 Herc4-201ENSMUST00000020258 3898 ntAPPRIS P2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Shox2P70390 Gm24830-201ENSMUST00000102024 166 ntBASIC11.97□□□□□ -0.49
Shox2P70390 Ighv1-80-201ENSMUST00000103547 351 ntAPPRIS P1 BASIC11.97□□□□□ -0.49
Shox2P70390 Ppp1r14d-202ENSMUST00000110820 790 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Shox2P70390 Rs1-202ENSMUST00000112368 731 ntTSL 3 BASIC11.97□□□□□ -0.49
Shox2P70390 Nme9-202ENSMUST00000163199 1196 ntAPPRIS P1 TSL 5 BASIC11.97□□□□□ -0.49
Shox2P70390 Lrcol1-202ENSMUST00000185691 764 ntAPPRIS P2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Shox2P70390 1700086L19Rik-202ENSMUST00000185822 1028 ntTSL 3 BASIC11.97□□□□□ -0.49
Shox2P70390 Panct2-202ENSMUST00000188631 625 ntTSL 3 BASIC11.97□□□□□ -0.49
Shox2P70390 Gm42693-201ENSMUST00000196779 631 ntBASIC11.97□□□□□ -0.49
Shox2P70390 Hax1-207ENSMUST00000198782 855 ntAPPRIS ALT2 TSL 5 BASIC11.97□□□□□ -0.49
Shox2P70390 Gm20646-202ENSMUST00000199521 660 ntTSL 3 BASIC11.97□□□□□ -0.49
Shox2P70390 Fam71e1-204ENSMUST00000205422 366 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Shox2P70390 Gm7730-201ENSMUST00000212486 454 ntBASIC11.97□□□□□ -0.49
Shox2P70390 Gm32025-201ENSMUST00000217960 307 ntBASIC11.97□□□□□ -0.49
Shox2P70390 Gm807-202ENSMUST00000224929 408 ntBASIC11.97□□□□□ -0.49
Shox2P70390 Arl3-201ENSMUST00000026009 822 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Shox2P70390 Anapc15-202ENSMUST00000035395 836 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Shox2P70390 Ins1-201ENSMUST00000039652 1016 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Shox2P70390 Olfr983-201ENSMUST00000050996 1050 ntTSL 2 BASIC11.97□□□□□ -0.49
Shox2P70390 Ttr-201ENSMUST00000075312 1219 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Shox2P70390 Gm26232-201ENSMUST00000083360 166 ntBASIC11.97□□□□□ -0.49
Shox2P70390 Rnu1b6-201ENSMUST00000083839 166 ntBASIC11.97□□□□□ -0.49
Shox2P70390 Pin1rt1-201ENSMUST00000099659 1172 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Shox2P70390 Gm29100-201ENSMUST00000187564 4410 ntBASIC11.97□□□□□ -0.49
Shox2P70390 Ntrk3-205ENSMUST00000193002 2678 ntAPPRIS ALT2 TSL 5 BASIC11.97□□□□□ -0.49
Shox2P70390 Cdc42ep4-202ENSMUST00000106616 3405 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Shox2P70390 Gm5740-201ENSMUST00000211003 1857 ntBASIC11.97□□□□□ -0.49
Shox2P70390 Amigo3-201ENSMUST00000085060 2543 ntAPPRIS P1 BASIC11.97□□□□□ -0.49
Shox2P70390 Kpna7-202ENSMUST00000110673 2453 ntAPPRIS ALT2 TSL 5 BASIC11.97□□□□□ -0.49
Shox2P70390 Vrk1-201ENSMUST00000021539 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Shox2P70390 Trpv3-201ENSMUST00000049676 5835 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Shox2P70390 Trappc5-202ENSMUST00000207787 4411 ntAPPRIS P1 BASIC11.97□□□□□ -0.49
Shox2P70390 Arhgap29-201ENSMUST00000037958 5787 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Shox2P70390 Trim35-201ENSMUST00000022623 3678 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Shox2P70390 Gm20498-203ENSMUST00000166664 2284 ntAPPRIS P1 TSL 2 BASIC11.97□□□□□ -0.49
Shox2P70390 Dnajc16-201ENSMUST00000038014 5969 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Shox2P70390 Myo15b-201ENSMUST00000040703 2825 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Shox2P70390 Cdh20-201ENSMUST00000062528 4012 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Shox2P70390 Map3k12-201ENSMUST00000023812 5182 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Shox2P70390 Ascc1-202ENSMUST00000164083 1473 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Shox2P70390 Zfp108-202ENSMUST00000205982 2577 ntAPPRIS P2 TSL 1 (best) BASIC11.96□□□□□ -0.49
Shox2P70390 Aurkc-204ENSMUST00000208049 1401 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.49
Shox2P70390 Fyb2-202ENSMUST00000106804 3068 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.49
Shox2P70390 Lrrc8c-201ENSMUST00000067924 6976 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Shox2P70390 Adam19-201ENSMUST00000011400 6383 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Shox2P70390 Ncoa3-202ENSMUST00000109252 5757 ntAPPRIS ALT2 TSL 5 BASIC11.96□□□□□ -0.49
Shox2P70390 Fastkd5-201ENSMUST00000110262 3015 ntAPPRIS P1 TSL 2 BASIC11.96□□□□□ -0.49
Shox2P70390 Cyp21a2-ps-201ENSMUST00000172970 1383 ntBASIC11.96□□□□□ -0.49
Shox2P70390 AC207128.2-201ENSMUST00000223708 1924 ntBASIC11.96□□□□□ -0.49
Shox2P70390 Lpar5-201ENSMUST00000088292 1393 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Shox2P70390 Itgb2-201ENSMUST00000000299 2970 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Shox2P70390 Thap6-204ENSMUST00000193925 1337 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Shox2P70390 Gm8146-201ENSMUST00000192106 1847 ntBASIC11.96□□□□□ -0.49
Shox2P70390 Olfr582-203ENSMUST00000211036 1849 ntAPPRIS P1 TSL 5 BASIC11.96□□□□□ -0.49
Shox2P70390 Gm22189-201ENSMUST00000103822 86 ntBASIC11.96□□□□□ -0.49
Shox2P70390 Pmvk-202ENSMUST00000107410 652 ntTSL 5 BASIC11.96□□□□□ -0.49
Shox2P70390 Ppdpf-202ENSMUST00000108841 689 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Shox2P70390 Ndufa13-201ENSMUST00000110167 1251 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Shox2P70390 Mapkapk5-205ENSMUST00000111786 975 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Shox2P70390 Paxx-201ENSMUST00000114261 981 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Shox2P70390 Gm20457-201ENSMUST00000173374 682 ntTSL 3 BASIC11.96□□□□□ -0.49
Shox2P70390 Gm22175-201ENSMUST00000175007 78 ntBASIC11.96□□□□□ -0.49
Shox2P70390 Ccnd3-208ENSMUST00000182539 931 ntTSL 2 BASIC11.96□□□□□ -0.49
Shox2P70390 Neurl3-202ENSMUST00000188666 1206 ntTSL 5 BASIC11.96□□□□□ -0.49
Shox2P70390 Gm5896-201ENSMUST00000189662 1024 ntBASIC11.96□□□□□ -0.49
Shox2P70390 Gm31326-201ENSMUST00000191856 1048 ntBASIC11.96□□□□□ -0.49
Shox2P70390 Inpp4a-213ENSMUST00000193774 1243 ntTSL 5 BASIC11.96□□□□□ -0.49
Shox2P70390 Gm43438-201ENSMUST00000198133 379 ntBASIC11.96□□□□□ -0.49
Shox2P70390 AC151286.1-201ENSMUST00000198489 145 ntBASIC11.96□□□□□ -0.49
Shox2P70390 B9d2-203ENSMUST00000205658 995 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Shox2P70390 Gm34030-202ENSMUST00000211434 1126 ntTSL 5 BASIC11.96□□□□□ -0.49
Shox2P70390 Lats2-202ENSMUST00000038381 933 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Shox2P70390 Ube2i-201ENSMUST00000049911 1138 ntAPPRIS P1 TSL 3 BASIC11.96□□□□□ -0.49
Shox2P70390 Gm13199-201ENSMUST00000071016 747 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Shox2P70390 Nr5a2-205ENSMUST00000192929 1756 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 58.7 ms