Protein–RNA interactions for Protein: P63154

Crnkl1, Crooked neck-like protein 1, mousemouse

Known RBP Predictions only

Length 690 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Crnkl1P63154 Srrm2-201ENSMUST00000088621 8564 ntTSL 1 (best) BASIC12.02□□□□□ -0.48
Crnkl1P63154 Tshz3-201ENSMUST00000021641 5098 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Crnkl1P63154 Actc1-201ENSMUST00000090269 1473 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Crnkl1P63154 Lef1-201ENSMUST00000029611 3482 ntAPPRIS P2 TSL 1 (best) BASIC12.02□□□□□ -0.48
Crnkl1P63154 Npnt-203ENSMUST00000093971 1830 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.48
Crnkl1P63154 Cklf-202ENSMUST00000098464 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.48
Crnkl1P63154 Prx-202ENSMUST00000098644 4841 ntTSL 1 (best) BASIC12.02□□□□□ -0.48
Crnkl1P63154 Kir3dl1-202ENSMUST00000113105 1544 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Crnkl1P63154 Kifc5c-ps-201ENSMUST00000179040 1530 ntBASIC12.02□□□□□ -0.48
Crnkl1P63154 AC124433.1-202ENSMUST00000224762 1535 ntBASIC12.02□□□□□ -0.48
Crnkl1P63154 Tekt4-201ENSMUST00000025002 1532 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Crnkl1P63154 Gfra1-209ENSMUST00000169850 3224 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Crnkl1P63154 Epha6-201ENSMUST00000068860 3930 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Crnkl1P63154 Mapk8ip3-204ENSMUST00000117509 5418 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Crnkl1P63154 Wif1-201ENSMUST00000020439 2294 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Crnkl1P63154 Birc3-201ENSMUST00000013949 2667 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Crnkl1P63154 Retsat-205ENSMUST00000176364 1647 ntTSL 5 BASIC12.02□□□□□ -0.49
Crnkl1P63154 Defb30-203ENSMUST00000111208 503 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Crnkl1P63154 Defb30-204ENSMUST00000111209 721 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Crnkl1P63154 Oprm1-229ENSMUST00000152674 1179 ntTSL 3 BASIC12.02□□□□□ -0.49
Crnkl1P63154 Nat8f4-202ENSMUST00000159755 1129 ntTSL 2 BASIC12.02□□□□□ -0.49
Crnkl1P63154 Ighv2-3-201ENSMUST00000178229 347 ntAPPRIS P1 BASIC12.02□□□□□ -0.49
Crnkl1P63154 Oaz1-203ENSMUST00000179172 744 ntTSL 5 BASIC12.02□□□□□ -0.49
Crnkl1P63154 Gm43240-201ENSMUST00000198543 630 ntTSL 3 BASIC12.02□□□□□ -0.49
Crnkl1P63154 Sct-204ENSMUST00000211667 506 ntAPPRIS ALT2 TSL 2 BASIC12.02□□□□□ -0.49
Crnkl1P63154 Polr2h-201ENSMUST00000021405 950 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Crnkl1P63154 AC173210.1-201ENSMUST00000222341 1131 ntBASIC12.02□□□□□ -0.49
Crnkl1P63154 Tnfrsf19-205ENSMUST00000225730 744 ntAPPRIS ALT2 BASIC12.02□□□□□ -0.49
Crnkl1P63154 Csrp3-201ENSMUST00000032658 877 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Crnkl1P63154 Nudt22-201ENSMUST00000041686 1000 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Crnkl1P63154 Oaz1-ps-201ENSMUST00000052440 681 ntBASIC12.02□□□□□ -0.49
Crnkl1P63154 Il27-201ENSMUST00000058429 1021 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Crnkl1P63154 Alkbh6-201ENSMUST00000060834 982 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Crnkl1P63154 Trim11-202ENSMUST00000108809 3522 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Crnkl1P63154 Matn2-201ENSMUST00000022947 3551 ntAPPRIS P2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Crnkl1P63154 Pabpc1-201ENSMUST00000001809 2817 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Crnkl1P63154 Gm11494-201ENSMUST00000142279 1738 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Crnkl1P63154 AC153506.1-201ENSMUST00000218768 2915 ntBASIC12.02□□□□□ -0.49
Crnkl1P63154 Tfr2-201ENSMUST00000031729 2926 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Crnkl1P63154 Nuak2-201ENSMUST00000072177 2936 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Crnkl1P63154 Ptpn4-201ENSMUST00000064091 10874 ntAPPRIS P1 TSL 5 BASIC12.02□□□□□ -0.49
Crnkl1P63154 Kcnma1-205ENSMUST00000145596 12094 ntAPPRIS ALT2 BASIC12.02□□□□□ -0.49
Crnkl1P63154 Nono-201ENSMUST00000033673 2562 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Crnkl1P63154 Rasgef1b-209ENSMUST00000168092 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Crnkl1P63154 Rasgef1b-201ENSMUST00000031276 2990 ntAPPRIS P3 TSL 1 (best) BASIC12.02□□□□□ -0.49
Crnkl1P63154 Ugt1a2-201ENSMUST00000049289 2211 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Crnkl1P63154 Col6a6-202ENSMUST00000098441 8781 ntAPPRIS P2 TSL 5 BASIC12.02□□□□□ -0.49
Crnkl1P63154 Recql4-201ENSMUST00000036852 3922 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Crnkl1P63154 Zcchc8-204ENSMUST00000196282 4350 ntAPPRIS P1 TSL 5 BASIC12.02□□□□□ -0.49
Crnkl1P63154 CT025681.1-201ENSMUST00000225453 1855 ntBASIC12.02□□□□□ -0.49
Crnkl1P63154 Pla2g4f-201ENSMUST00000054651 3116 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Crnkl1P63154 Oprm1-214ENSMUST00000105605 1503 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Crnkl1P63154 Oprm1-201ENSMUST00000000783 1500 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Crnkl1P63154 Gm8131-201ENSMUST00000213783 1570 ntBASIC12.01□□□□□ -0.49
Crnkl1P63154 Lhx9-204ENSMUST00000112026 2065 ntAPPRIS P2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Crnkl1P63154 Numa1-201ENSMUST00000084852 7180 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Crnkl1P63154 Cdadc1-208ENSMUST00000225839 3189 ntAPPRIS ALT2 BASIC12.01□□□□□ -0.49
Crnkl1P63154 Cic-212ENSMUST00000169266 8221 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Crnkl1P63154 Knop1-206ENSMUST00000126792 3253 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Crnkl1P63154 Ift20-202ENSMUST00000108275 582 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Crnkl1P63154 Rhox2f-201ENSMUST00000115173 799 ntAPPRIS P1 TSL 5 BASIC12.01□□□□□ -0.49
Crnkl1P63154 Gm13612-201ENSMUST00000119276 390 ntBASIC12.01□□□□□ -0.49
Crnkl1P63154 Gm11814-201ENSMUST00000119515 929 ntBASIC12.01□□□□□ -0.49
Crnkl1P63154 Gm15824-201ENSMUST00000119516 955 ntBASIC12.01□□□□□ -0.49
Crnkl1P63154 Gm11592-201ENSMUST00000133160 637 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Crnkl1P63154 Klk12-201ENSMUST00000014063 924 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Crnkl1P63154 Gm11684-201ENSMUST00000144975 757 ntTSL 5 BASIC12.01□□□□□ -0.49
Crnkl1P63154 Glo1-202ENSMUST00000167624 895 ntAPPRIS P1 TSL 2 BASIC12.01□□□□□ -0.49
Crnkl1P63154 Gnb4-208ENSMUST00000193050 423 ntTSL 5 BASIC12.01□□□□□ -0.49
Crnkl1P63154 Psmc3ip-201ENSMUST00000019447 1291 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Crnkl1P63154 Gm43433-201ENSMUST00000196573 481 ntBASIC12.01□□□□□ -0.49
Crnkl1P63154 H2-Oa-201ENSMUST00000025192 1088 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Crnkl1P63154 Prg2-201ENSMUST00000028467 838 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Crnkl1P63154 Mrps17-201ENSMUST00000042191 832 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Crnkl1P63154 Tescl-201ENSMUST00000069562 855 ntAPPRIS P1 BASIC12.01□□□□□ -0.49
Crnkl1P63154 Rhox2e-201ENSMUST00000072167 799 ntAPPRIS P1 TSL 5 BASIC12.01□□□□□ -0.49
Crnkl1P63154 Ip6k3-201ENSMUST00000025046 2307 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Crnkl1P63154 Hnf1b-202ENSMUST00000108113 2376 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Crnkl1P63154 Emd-202ENSMUST00000088313 1338 ntTSL 2 BASIC12.01□□□□□ -0.49
Crnkl1P63154 Alox5-202ENSMUST00000164547 1854 ntTSL 5 BASIC12.01□□□□□ -0.49
Crnkl1P63154 Gstt3-201ENSMUST00000001715 1880 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Crnkl1P63154 Slc12a7-201ENSMUST00000017900 5142 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Crnkl1P63154 Gm43760-201ENSMUST00000202120 3015 ntBASIC12.01□□□□□ -0.49
Crnkl1P63154 Gm43963-201ENSMUST00000203466 2488 ntBASIC12.01□□□□□ -0.49
Crnkl1P63154 Ush1c-201ENSMUST00000009667 3072 ntAPPRIS P3 TSL 1 (best) BASIC12.01□□□□□ -0.49
Crnkl1P63154 Aoc2-201ENSMUST00000041095 2543 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Crnkl1P63154 Scml2-206ENSMUST00000112345 4847 ntAPPRIS ALT2 TSL 5 BASIC12.01□□□□□ -0.49
Crnkl1P63154 Cdc7-204ENSMUST00000118261 3129 ntAPPRIS P3 TSL 1 (best) BASIC12.01□□□□□ -0.49
Crnkl1P63154 Nrde2-201ENSMUST00000021596 3718 ntAPPRIS P1 TSL 5 BASIC12.01□□□□□ -0.49
Crnkl1P63154 Gm12968-201ENSMUST00000138291 1454 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Crnkl1P63154 Myo7a-204ENSMUST00000107128 7506 ntAPPRIS ALT2 TSL 5 BASIC12.01□□□□□ -0.49
Crnkl1P63154 Ggt1-208ENSMUST00000134503 2140 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Crnkl1P63154 Rab8a-201ENSMUST00000003121 4550 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Crnkl1P63154 Slc22a18-201ENSMUST00000052348 1525 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Crnkl1P63154 Wdr26-208ENSMUST00000162963 6452 ntAPPRIS ALT2 TSL 5 BASIC12.01□□□□□ -0.49
Crnkl1P63154 Kalrn-206ENSMUST00000114954 4677 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Crnkl1P63154 Tns1-209ENSMUST00000187691 2813 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Crnkl1P63154 AC091764.2-201ENSMUST00000218190 1590 ntTSL 5 BASIC12.01□□□□□ -0.49
Crnkl1P63154 Abhd6-202ENSMUST00000166497 2226 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Crnkl1P63154 Gm37931-201ENSMUST00000194686 2866 ntBASIC12.01□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 43.6 ms