Protein–RNA interactions for Protein: P62960

Ybx1, Nuclease-sensitive element-binding protein 1, mousemouse

Known RBP Predictions only

Length 322 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ybx1P62960 Nrg1-201ENSMUST00000073884 2452 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
Ybx1P62960 Il21r-202ENSMUST00000206103 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.42
Ybx1P62960 Heatr3-202ENSMUST00000121949 3086 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
Ybx1P62960 Pak6-202ENSMUST00000110853 3677 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Ybx1P62960 Tfe3-203ENSMUST00000101695 2989 ntTSL 5 BASIC12.45□□□□□ -0.42
Ybx1P62960 Cngb1-203ENSMUST00000120044 3243 ntAPPRIS ALT2 TSL 5 BASIC12.45□□□□□ -0.42
Ybx1P62960 Bcl2l2-201ENSMUST00000022806 3509 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Ybx1P62960 Rgs9bp-201ENSMUST00000069912 6590 ntAPPRIS P1 BASIC12.45□□□□□ -0.42
Ybx1P62960 Gm14150-201ENSMUST00000122404 1354 ntBASIC12.45□□□□□ -0.42
Ybx1P62960 Add2-208ENSMUST00000203786 2289 ntAPPRIS P3 TSL 1 (best) BASIC12.45□□□□□ -0.42
Ybx1P62960 Polrmt-201ENSMUST00000020580 3755 ntAPPRIS P2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Ybx1P62960 D930032P07Rik-201ENSMUST00000181393 1314 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Ybx1P62960 Rasa3-201ENSMUST00000117551 4404 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Ybx1P62960 Rhox9-202ENSMUST00000170643 2422 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Ybx1P62960 Ighv1-80-201ENSMUST00000103547 351 ntAPPRIS P1 BASIC12.45□□□□□ -0.42
Ybx1P62960 Ifitm10-203ENSMUST00000105988 824 ntAPPRIS P4 TSL 2 BASIC12.45□□□□□ -0.42
Ybx1P62960 Rwdd3-205ENSMUST00000106467 1158 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Ybx1P62960 Rpsa-ps4-201ENSMUST00000121691 888 ntBASIC12.45□□□□□ -0.42
Ybx1P62960 Asb8-202ENSMUST00000123626 1100 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Ybx1P62960 Asb8-203ENSMUST00000123922 1162 ntAPPRIS P1 TSL 3 BASIC12.45□□□□□ -0.42
Ybx1P62960 Nsd3-203ENSMUST00000136107 3818 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Ybx1P62960 C230038L03Rik-202ENSMUST00000136294 1197 ntTSL 2 BASIC12.45□□□□□ -0.42
Ybx1P62960 D630008O14Rik-202ENSMUST00000149909 1043 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Ybx1P62960 Tspo2-205ENSMUST00000162481 473 ntTSL 5 BASIC12.45□□□□□ -0.42
Ybx1P62960 A630035G10Rik-202ENSMUST00000194468 1065 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Ybx1P62960 Gm19287-201ENSMUST00000203190 358 ntBASIC12.45□□□□□ -0.42
Ybx1P62960 Lce3d-201ENSMUST00000059053 491 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Ybx1P62960 Zfp341-202ENSMUST00000109702 3162 ntAPPRIS ALT2 TSL 5 BASIC12.45□□□□□ -0.42
Ybx1P62960 Cog6-201ENSMUST00000036665 3182 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Ybx1P62960 Gm37324-201ENSMUST00000194500 4504 ntBASIC12.45□□□□□ -0.42
Ybx1P62960 Leprot-202ENSMUST00000106927 1754 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Ybx1P62960 Rara-207ENSMUST00000164748 3129 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Ybx1P62960 AC123834.1-201ENSMUST00000225346 2043 ntBASIC12.45□□□□□ -0.42
Ybx1P62960 Gm18227-201ENSMUST00000211082 1468 ntBASIC12.45□□□□□ -0.42
Ybx1P62960 Clca2-203ENSMUST00000198993 2774 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Ybx1P62960 Gm9530-201ENSMUST00000181160 3281 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Ybx1P62960 Ndufs4-201ENSMUST00000022286 1698 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Ybx1P62960 Lzts3-201ENSMUST00000045761 4201 ntAPPRIS P3 TSL 5 BASIC12.45□□□□□ -0.42
Ybx1P62960 AC130671.2-201ENSMUST00000227224 1621 ntBASIC12.44□□□□□ -0.42
Ybx1P62960 Fmo1-201ENSMUST00000046049 2388 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Ybx1P62960 Rtn4-203ENSMUST00000102841 4060 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Ybx1P62960 Lnx1-206ENSMUST00000121690 2302 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Ybx1P62960 Hsd3b4-201ENSMUST00000179429 1575 ntAPPRIS P1 TSL 2 BASIC12.44□□□□□ -0.42
Ybx1P62960 Gm10681-203ENSMUST00000186215 1575 ntAPPRIS P1 TSL 2 BASIC12.44□□□□□ -0.42
Ybx1P62960 Gm9387-201ENSMUST00000098624 1320 ntBASIC12.44□□□□□ -0.42
Ybx1P62960 Scoc-202ENSMUST00000167525 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Ybx1P62960 Tmc4-202ENSMUST00000121743 2204 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Ybx1P62960 Mak-202ENSMUST00000070193 2937 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Ybx1P62960 Mcm8-202ENSMUST00000066559 3397 ntAPPRIS P3 TSL 1 (best) BASIC12.44□□□□□ -0.42
Ybx1P62960 Gm13809-201ENSMUST00000117921 597 ntBASIC12.44□□□□□ -0.42
Ybx1P62960 Gm14724-201ENSMUST00000118400 537 ntBASIC12.44□□□□□ -0.42
Ybx1P62960 Oaz2-ps-201ENSMUST00000121735 537 ntBASIC12.44□□□□□ -0.42
Ybx1P62960 Gm15881-201ENSMUST00000148792 942 ntBASIC12.44□□□□□ -0.42
Ybx1P62960 Retn-202ENSMUST00000169234 1139 ntAPPRIS P1 TSL 2 BASIC12.44□□□□□ -0.42
Ybx1P62960 Gm17231-203ENSMUST00000170133 637 ntTSL 3 BASIC12.44□□□□□ -0.42
Ybx1P62960 Rpl31-202ENSMUST00000178079 487 ntAPPRIS P1 TSL 2 BASIC12.44□□□□□ -0.42
Ybx1P62960 Ssty2-201ENSMUST00000179136 684 ntAPPRIS P1 BASIC12.44□□□□□ -0.42
Ybx1P62960 Gm4131-201ENSMUST00000186010 1264 ntAPPRIS P1 TSL 5 BASIC12.44□□□□□ -0.42
Ybx1P62960 Ssty2-202ENSMUST00000190565 1216 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Ybx1P62960 Gm32352-201ENSMUST00000212465 688 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Ybx1P62960 Cox6a2-201ENSMUST00000033049 680 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Ybx1P62960 Sstr2-201ENSMUST00000067591 1041 ntTSL 2 BASIC12.44□□□□□ -0.42
Ybx1P62960 Tagln3-201ENSMUST00000096057 1240 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Ybx1P62960 Tepp-201ENSMUST00000098480 660 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Ybx1P62960 Actg-ps1-201ENSMUST00000099636 1124 ntBASIC12.44□□□□□ -0.42
Ybx1P62960 Osbp2-203ENSMUST00000102950 3077 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Ybx1P62960 Cyp2j13-203ENSMUST00000107078 1493 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Ybx1P62960 Acin1-208ENSMUST00000126166 2369 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Ybx1P62960 Inpp5e-205ENSMUST00000145701 4147 ntAPPRIS P3 TSL 1 (best) BASIC12.44□□□□□ -0.42
Ybx1P62960 Abcd1-202ENSMUST00000114461 2323 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Ybx1P62960 Adra1a-206ENSMUST00000225182 2337 ntBASIC12.44□□□□□ -0.42
Ybx1P62960 Pepd-201ENSMUST00000075068 1881 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Ybx1P62960 Galnt17-201ENSMUST00000086023 8040 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Ybx1P62960 Cd72-205ENSMUST00000107926 1419 ntAPPRIS P3 TSL 1 (best) BASIC12.44□□□□□ -0.42
Ybx1P62960 Cd72-203ENSMUST00000098105 1420 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Ybx1P62960 Gm44942-201ENSMUST00000096093 2072 ntBASIC12.44□□□□□ -0.42
Ybx1P62960 Cdc20b-201ENSMUST00000109244 1620 ntAPPRIS P2 TSL 5 BASIC12.44□□□□□ -0.42
Ybx1P62960 Efna1-202ENSMUST00000118587 1632 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Ybx1P62960 Astn1-202ENSMUST00000170718 2927 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Ybx1P62960 Nub1-202ENSMUST00000197407 3546 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Ybx1P62960 Atp6v1h-201ENSMUST00000044369 2049 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Ybx1P62960 Bmp7-201ENSMUST00000009143 3670 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Ybx1P62960 Foxj2-202ENSMUST00000177927 4620 ntAPPRIS P1 TSL 5 BASIC12.43□□□□□ -0.42
Ybx1P62960 Dagla-201ENSMUST00000039327 5634 ntAPPRIS P1 TSL 5 BASIC12.43□□□□□ -0.42
Ybx1P62960 Urgcp-204ENSMUST00000120306 3972 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Ybx1P62960 Gba-202ENSMUST00000167998 1938 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Ybx1P62960 CT025624.1-201ENSMUST00000224007 2700 ntBASIC12.43□□□□□ -0.42
Ybx1P62960 Vit-201ENSMUST00000024880 2720 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Ybx1P62960 Timp3-201ENSMUST00000020234 4722 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Ybx1P62960 Sesn2-201ENSMUST00000030724 3475 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Ybx1P62960 Chrd-201ENSMUST00000007171 3275 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Ybx1P62960 Apoo-202ENSMUST00000113896 1032 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Ybx1P62960 Gm5778-201ENSMUST00000171003 1072 ntBASIC12.43□□□□□ -0.42
Ybx1P62960 A430050A11Rik-201ENSMUST00000195348 646 ntBASIC12.43□□□□□ -0.42
Ybx1P62960 Gm2965-201ENSMUST00000198365 343 ntBASIC12.43□□□□□ -0.42
Ybx1P62960 Gm42629-201ENSMUST00000199063 1102 ntBASIC12.43□□□□□ -0.42
Ybx1P62960 Gm35368-201ENSMUST00000209554 1244 ntTSL 5 BASIC12.43□□□□□ -0.42
Ybx1P62960 Gm45909-201ENSMUST00000212413 1031 ntBASIC12.43□□□□□ -0.42
Ybx1P62960 4930448E22Rik-203ENSMUST00000215349 299 ntTSL 3 BASIC12.43□□□□□ -0.42
Ybx1P62960 Gm9797-202ENSMUST00000218003 294 ntBASIC12.43□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 84.6 ms