Protein–RNA interactions for Protein: P58466

Ctdsp1, Carboxy-terminal domain RNA polymerase II polypeptide A small phosphatase 1, mousemouse

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ctdsp1P58466 Taf1a-201ENSMUST00000097043 1472 ntAPPRIS P1 TSL 5 BASIC9.45□□□□□ -0.9
Ctdsp1P58466 Tyro3-202ENSMUST00000110783 4460 ntAPPRIS ALT2 TSL 1 (best) BASIC9.45□□□□□ -0.9
Ctdsp1P58466 Pou6f1-201ENSMUST00000058274 2523 ntTSL 2 BASIC9.45□□□□□ -0.9
Ctdsp1P58466 Prdx2-201ENSMUST00000005292 1500 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
Ctdsp1P58466 Tspan18-202ENSMUST00000111265 3751 ntAPPRIS P1 TSL 5 BASIC9.45□□□□□ -0.9
Ctdsp1P58466 Bzw1-201ENSMUST00000050552 3876 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
Ctdsp1P58466 AC164161.2-201ENSMUST00000217446 1730 ntTSL 5 BASIC9.45□□□□□ -0.9
Ctdsp1P58466 Ube3a-203ENSMUST00000200758 9856 ntAPPRIS P3 TSL 1 (best) BASIC9.45□□□□□ -0.9
Ctdsp1P58466 Acacb-202ENSMUST00000102582 8788 ntAPPRIS P1 TSL 5 BASIC9.45□□□□□ -0.9
Ctdsp1P58466 Fut8-203ENSMUST00000177595 2980 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
Ctdsp1P58466 Zfp280d-205ENSMUST00000183468 1834 ntTSL 1 (best) BASIC9.45□□□□□ -0.9
Ctdsp1P58466 Cit-212ENSMUST00000141101 6794 ntTSL 5 BASIC9.45□□□□□ -0.9
Ctdsp1P58466 Wdr43-201ENSMUST00000047086 3450 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Ctdsp1P58466 Exo1-201ENSMUST00000039725 7796 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Ctdsp1P58466 Mir124a-1hg-201ENSMUST00000180610 4103 ntTSL 1 (best) BASIC9.44□□□□□ -0.9
Ctdsp1P58466 Chmp1b-202ENSMUST00000210564 2490 ntAPPRIS P1 BASIC9.44□□□□□ -0.9
Ctdsp1P58466 Megf10-201ENSMUST00000075770 7514 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Ctdsp1P58466 4931406C07Rik-202ENSMUST00000178977 2650 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Ctdsp1P58466 Faim2-201ENSMUST00000023750 4520 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Ctdsp1P58466 Cpne9-201ENSMUST00000041203 2777 ntAPPRIS P1 TSL 5 BASIC9.44□□□□□ -0.9
Ctdsp1P58466 Mpl-202ENSMUST00000102671 2934 ntAPPRIS P3 TSL 1 (best) BASIC9.44□□□□□ -0.9
Ctdsp1P58466 Tia1-206ENSMUST00000113713 3108 ntAPPRIS ALT2 TSL 1 (best) BASIC9.44□□□□□ -0.9
Ctdsp1P58466 G630016G05Rik-202ENSMUST00000156095 3398 ntTSL 1 (best) BASIC9.44□□□□□ -0.9
Ctdsp1P58466 Elavl2-204ENSMUST00000107110 3671 ntAPPRIS ALT1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Ctdsp1P58466 Tmem134-216ENSMUST00000171743 3701 ntTSL 5 BASIC9.44□□□□□ -0.9
Ctdsp1P58466 Zfp688-201ENSMUST00000106300 1015 ntAPPRIS P1 TSL 2 BASIC9.44□□□□□ -0.9
Ctdsp1P58466 Timm10-202ENSMUST00000111631 564 ntAPPRIS P1 TSL 3 BASIC9.44□□□□□ -0.9
Ctdsp1P58466 Rpl9-203ENSMUST00000120094 680 ntAPPRIS P1 TSL 2 BASIC9.44□□□□□ -0.9
Ctdsp1P58466 Cd209f-202ENSMUST00000138439 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC9.44□□□□□ -0.9
Ctdsp1P58466 Cd209f-203ENSMUST00000145007 1186 ntAPPRIS P2 TSL 1 (best) BASIC9.44□□□□□ -0.9
Ctdsp1P58466 Rprl2-201ENSMUST00000157150 290 ntBASIC9.44□□□□□ -0.9
Ctdsp1P58466 Gm17271-201ENSMUST00000165535 355 ntBASIC9.44□□□□□ -0.9
Ctdsp1P58466 Mir8098-201ENSMUST00000184011 137 ntBASIC9.44□□□□□ -0.9
Ctdsp1P58466 Gm27164-201ENSMUST00000184359 723 ntTSL 1 (best) BASIC9.44□□□□□ -0.9
Ctdsp1P58466 Gm45641-201ENSMUST00000209775 452 ntTSL 5 BASIC9.44□□□□□ -0.9
Ctdsp1P58466 Gm45612-201ENSMUST00000211320 160 ntBASIC9.44□□□□□ -0.9
Ctdsp1P58466 AC125070.1-201ENSMUST00000223523 555 ntTSL 5 BASIC9.44□□□□□ -0.9
Ctdsp1P58466 AC154222.1-201ENSMUST00000223882 475 ntBASIC9.44□□□□□ -0.9
Ctdsp1P58466 Timm10-201ENSMUST00000028470 690 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Ctdsp1P58466 Rn7sk-201ENSMUST00000083103 331 ntBASIC9.44□□□□□ -0.9
Ctdsp1P58466 Gm26315-201ENSMUST00000083890 321 ntBASIC9.44□□□□□ -0.9
Ctdsp1P58466 Inf2-201ENSMUST00000101029 4001 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Ctdsp1P58466 Rasal2-204ENSMUST00000132699 4013 ntAPPRIS ALT2 TSL 5 BASIC9.44□□□□□ -0.9
Ctdsp1P58466 Gtf2i-219ENSMUST00000174155 4141 ntAPPRIS P4 TSL 2 BASIC9.44□□□□□ -0.9
Ctdsp1P58466 Dtd1-201ENSMUST00000028917 1350 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Ctdsp1P58466 Actrt2-201ENSMUST00000060062 1435 ntAPPRIS P1 BASIC9.44□□□□□ -0.9
Ctdsp1P58466 Fam180a-201ENSMUST00000051176 1606 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Ctdsp1P58466 Asic5-201ENSMUST00000029641 1657 ntAPPRIS P2 TSL 1 (best) BASIC9.44□□□□□ -0.9
Ctdsp1P58466 Ccdc15-206ENSMUST00000217238 1747 ntAPPRIS ALT2 TSL 1 (best) BASIC9.44□□□□□ -0.9
Ctdsp1P58466 Acot9-201ENSMUST00000026324 1752 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Ctdsp1P58466 Th-201ENSMUST00000000219 1829 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Ctdsp1P58466 Mirg-201ENSMUST00000181496 1906 ntTSL 1 (best) BASIC9.44□□□□□ -0.9
Ctdsp1P58466 Mllt3-201ENSMUST00000078090 6069 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Ctdsp1P58466 Araf-201ENSMUST00000001155 2358 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Ctdsp1P58466 Nuak2-202ENSMUST00000082125 3107 ntAPPRIS P3 TSL 1 (best) BASIC9.44□□□□□ -0.9
Ctdsp1P58466 Nnt-203ENSMUST00000109204 3198 ntTSL 5 BASIC9.44□□□□□ -0.9
Ctdsp1P58466 Mtmr12-202ENSMUST00000071993 3351 ntTSL 1 (best) BASIC9.44□□□□□ -0.9
Ctdsp1P58466 Gpc6-202ENSMUST00000088483 3488 ntAPPRIS P3 TSL 5 BASIC9.44□□□□□ -0.9
Ctdsp1P58466 Ephb2-203ENSMUST00000105846 3653 ntAPPRIS ALT2 TSL 5 BASIC9.44□□□□□ -0.9
Ctdsp1P58466 Vps54-201ENSMUST00000006221 4323 ntAPPRIS P3 TSL 1 (best) BASIC9.44□□□□□ -0.9
Ctdsp1P58466 Fam53c-201ENSMUST00000049281 4475 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Ctdsp1P58466 Slc25a12-206ENSMUST00000151937 6351 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Ctdsp1P58466 Ifih1-201ENSMUST00000028259 5470 ntAPPRIS P3 TSL 1 (best) BASIC9.43□□□□□ -0.9
Ctdsp1P58466 Ccdc62-201ENSMUST00000094320 3924 ntAPPRIS P1 TSL 5 BASIC9.43□□□□□ -0.9
Ctdsp1P58466 Armc1-201ENSMUST00000029125 3673 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Ctdsp1P58466 Tiam1-214ENSMUST00000164263 3569 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
Ctdsp1P58466 Plekhg4-203ENSMUST00000160191 3339 ntAPPRIS ALT2 TSL 5 BASIC9.43□□□□□ -0.9
Ctdsp1P58466 4732491K20Rik-201ENSMUST00000181774 3142 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
Ctdsp1P58466 Corin-207ENSMUST00000177290 2943 ntAPPRIS ALT2 TSL 5 BASIC9.43□□□□□ -0.9
Ctdsp1P58466 Rsph10b-203ENSMUST00000166847 2878 ntAPPRIS P1 TSL 5 BASIC9.43□□□□□ -0.9
Ctdsp1P58466 Slc26a11-201ENSMUST00000050880 2695 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Ctdsp1P58466 Gm15446-201ENSMUST00000112544 2417 ntAPPRIS P1 TSL 2 BASIC9.43□□□□□ -0.9
Ctdsp1P58466 Nxpe5-204ENSMUST00000161047 2379 ntAPPRIS ALT2 TSL 1 (best) BASIC9.43□□□□□ -0.9
Ctdsp1P58466 Ccdc63-201ENSMUST00000058960 2299 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Ctdsp1P58466 Umad1-201ENSMUST00000159168 1975 ntAPPRIS ALT2 TSL 1 (best) BASIC9.43□□□□□ -0.9
Ctdsp1P58466 A230072I06Rik-201ENSMUST00000098935 1839 ntAPPRIS P1 BASIC9.43□□□□□ -0.9
Ctdsp1P58466 Nrn1-204ENSMUST00000224323 1779 ntBASIC9.43□□□□□ -0.9
Ctdsp1P58466 1810014B01Rik-201ENSMUST00000181587 1661 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
Ctdsp1P58466 Gm38157-201ENSMUST00000194178 1698 ntBASIC9.43□□□□□ -0.9
Ctdsp1P58466 Adi1-201ENSMUST00000020957 1652 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Ctdsp1P58466 Abhd14b-209ENSMUST00000216130 1624 ntAPPRIS P1 TSL 5 BASIC9.43□□□□□ -0.9
Ctdsp1P58466 Rad9b-201ENSMUST00000049009 1631 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Ctdsp1P58466 Pdlim2-210ENSMUST00000153735 1578 ntAPPRIS P1 TSL 5 BASIC9.43□□□□□ -0.9
Ctdsp1P58466 Nanos2-201ENSMUST00000063563 1563 ntAPPRIS P1 BASIC9.43□□□□□ -0.9
Ctdsp1P58466 Arhgef7-203ENSMUST00000098938 4628 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
Ctdsp1P58466 Cdk15-201ENSMUST00000114248 1477 ntAPPRIS P2 TSL 1 (best) BASIC9.43□□□□□ -0.9
Ctdsp1P58466 B3gntl1-201ENSMUST00000062654 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC9.43□□□□□ -0.9
Ctdsp1P58466 Jmjd4-201ENSMUST00000045279 4315 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
Ctdsp1P58466 Zdhhc3-208ENSMUST00000147563 6987 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Ctdsp1P58466 Ccdc167-202ENSMUST00000128751 1365 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Ctdsp1P58466 Stx4a-202ENSMUST00000121705 1316 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Ctdsp1P58466 Mirg-202ENSMUST00000181543 1300 ntTSL 5 BASIC9.43□□□□□ -0.9
Ctdsp1P58466 Ppp4r1-201ENSMUST00000073104 3850 ntAPPRIS P3 TSL 1 (best) BASIC9.43□□□□□ -0.9
Ctdsp1P58466 Trav3-1-201ENSMUST00000103569 385 ntAPPRIS P1 BASIC9.43□□□□□ -0.9
Ctdsp1P58466 Trav3-4-201ENSMUST00000103670 458 ntAPPRIS P1 BASIC9.43□□□□□ -0.9
Ctdsp1P58466 Tmsb4x-202ENSMUST00000112175 864 ntTSL 2 BASIC9.43□□□□□ -0.9
Ctdsp1P58466 Kxd1-202ENSMUST00000117580 696 ntTSL 5 BASIC9.43□□□□□ -0.9
Ctdsp1P58466 Gm14140-201ENSMUST00000119999 995 ntBASIC9.43□□□□□ -0.9
Ctdsp1P58466 Gm16295-201ENSMUST00000139512 643 ntTSL 3 BASIC9.43□□□□□ -0.9
Ctdsp1P58466 Fam241b-208ENSMUST00000142796 1135 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Retrieved 100 of 76,532 protein–RNA pairs in 45.4 ms