Protein–RNA interactions for Protein: P56726

Smo, Smoothened homolog, mousemouse

Predictions only

Length 793 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SmoP56726 2810430I11Rik-201ENSMUST00000154246 3416 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
SmoP56726 Dnmbp-202ENSMUST00000212032 5074 ntAPPRIS ALT2 TSL 5 BASIC12.2□□□□□ -0.46
SmoP56726 Lzts1-204ENSMUST00000185176 5019 ntAPPRIS P1 TSL 5 BASIC12.2□□□□□ -0.46
SmoP56726 Brwd1-201ENSMUST00000023631 8209 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
SmoP56726 Igtp-202ENSMUST00000094169 1767 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
SmoP56726 P2rx1-201ENSMUST00000021141 2486 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
SmoP56726 Usp5-202ENSMUST00000122110 3076 ntAPPRIS ALT1 TSL 1 (best) BASIC12.2□□□□□ -0.46
SmoP56726 Ap5b1-201ENSMUST00000096318 3092 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
SmoP56726 Trmt1l-201ENSMUST00000065625 2749 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
SmoP56726 Sgk3-202ENSMUST00000166384 3706 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
SmoP56726 Arrb1-201ENSMUST00000032995 3715 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
SmoP56726 Gm26677-201ENSMUST00000180553 1672 ntTSL 5 BASIC12.2□□□□□ -0.46
SmoP56726 Mei4-201ENSMUST00000057067 2670 ntAPPRIS P2 TSL 1 (best) BASIC12.2□□□□□ -0.46
SmoP56726 Nr1i3-202ENSMUST00000075469 1305 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
SmoP56726 Cpsf7-201ENSMUST00000038379 3604 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
SmoP56726 Rgs12-205ENSMUST00000114283 2628 ntAPPRIS ALT2 TSL 5 BASIC12.2□□□□□ -0.46
SmoP56726 Smg7-203ENSMUST00000111836 3928 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
SmoP56726 Ubqln5-201ENSMUST00000053743 1915 ntAPPRIS P1 BASIC12.2□□□□□ -0.46
SmoP56726 Ucp3-202ENSMUST00000107059 1260 ntAPPRIS P1 TSL 5 BASIC12.2□□□□□ -0.46
SmoP56726 Cstl1-201ENSMUST00000109952 629 ntAPPRIS P1 TSL 5 BASIC12.2□□□□□ -0.46
SmoP56726 Gm8343-201ENSMUST00000182705 994 ntBASIC12.2□□□□□ -0.46
SmoP56726 Gm29707-202ENSMUST00000198744 659 ntTSL 3 BASIC12.2□□□□□ -0.46
SmoP56726 Gm8956-201ENSMUST00000203939 825 ntBASIC12.2□□□□□ -0.46
SmoP56726 4933424G06Rik-204ENSMUST00000208994 1120 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
SmoP56726 8030455M16Rik-201ENSMUST00000213014 902 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
SmoP56726 Gm39460-201ENSMUST00000215728 1266 ntTSL 5 BASIC12.2□□□□□ -0.46
SmoP56726 Polr2d-201ENSMUST00000025106 956 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
SmoP56726 Fuk-201ENSMUST00000041382 3838 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
SmoP56726 Lce3d-201ENSMUST00000059053 491 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
SmoP56726 Mcph1-201ENSMUST00000039412 4662 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
SmoP56726 Fam198a-204ENSMUST00000215990 2149 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
SmoP56726 Gm16564-201ENSMUST00000162545 3010 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
SmoP56726 Sh2b1-206ENSMUST00000205889 3011 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
SmoP56726 Mgme1-202ENSMUST00000110027 2359 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
SmoP56726 Grid2ip-201ENSMUST00000010969 3459 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
SmoP56726 Lsp1-205ENSMUST00000105968 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
SmoP56726 Pabpc2-201ENSMUST00000063219 2586 ntAPPRIS P1 BASIC12.2□□□□□ -0.46
SmoP56726 Arhgap39-201ENSMUST00000036176 4500 ntAPPRIS ALT2 TSL 5 BASIC12.19□□□□□ -0.46
SmoP56726 Clpx-202ENSMUST00000113824 2809 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
SmoP56726 Hspa4l-201ENSMUST00000108086 2744 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
SmoP56726 Riok1-201ENSMUST00000021866 2738 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
SmoP56726 Pank4-202ENSMUST00000070953 2706 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
SmoP56726 Ccdc85a-202ENSMUST00000093253 5431 ntAPPRIS P3 TSL 1 (best) BASIC12.19□□□□□ -0.46
SmoP56726 Cyb5rl-202ENSMUST00000106756 1604 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
SmoP56726 4833422M21Rik-202ENSMUST00000181252 2410 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
SmoP56726 Rbm8a2-201ENSMUST00000104983 1338 ntAPPRIS P1 BASIC12.19□□□□□ -0.46
SmoP56726 Gm10152-201ENSMUST00000193475 1344 ntBASIC12.19□□□□□ -0.46
SmoP56726 Trim26-205ENSMUST00000130367 3187 ntAPPRIS P2 TSL 5 BASIC12.19□□□□□ -0.46
SmoP56726 Slc39a8-206ENSMUST00000180196 3383 ntAPPRIS P1 TSL 5 BASIC12.19□□□□□ -0.46
SmoP56726 Senp3-201ENSMUST00000005336 2313 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
SmoP56726 Wdr66-202ENSMUST00000121964 4873 ntAPPRIS P1 TSL 5 BASIC12.19□□□□□ -0.46
SmoP56726 Gm14190-201ENSMUST00000105073 153 ntAPPRIS P1 BASIC12.19□□□□□ -0.46
SmoP56726 Gngt2-207ENSMUST00000107714 558 ntAPPRIS P1 TSL 3 BASIC12.19□□□□□ -0.46
SmoP56726 Dynlrb1-202ENSMUST00000109682 684 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
SmoP56726 Gm15610-201ENSMUST00000120584 195 ntBASIC12.19□□□□□ -0.46
SmoP56726 Got2-ps1-201ENSMUST00000121655 1293 ntBASIC12.19□□□□□ -0.46
SmoP56726 3110056K07Rik-202ENSMUST00000136690 1063 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
SmoP56726 Gm12589-201ENSMUST00000153767 638 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
SmoP56726 Mcpt8-201ENSMUST00000015594 836 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
SmoP56726 Lmo3-202ENSMUST00000161450 1048 ntAPPRIS P1 TSL 5 BASIC12.19□□□□□ -0.46
SmoP56726 Mir5132-201ENSMUST00000175166 71 ntBASIC12.19□□□□□ -0.46
SmoP56726 Rpl41-203ENSMUST00000176683 437 ntAPPRIS P2 TSL 2 BASIC12.19□□□□□ -0.46
SmoP56726 Ighv8-4-201ENSMUST00000178949 294 ntAPPRIS P1 BASIC12.19□□□□□ -0.46
SmoP56726 Zfp229-206ENSMUST00000183192 653 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
SmoP56726 Gm27390-201ENSMUST00000184516 176 ntBASIC12.19□□□□□ -0.46
SmoP56726 Gm43184-201ENSMUST00000197247 542 ntBASIC12.19□□□□□ -0.46
SmoP56726 1700018A23Rik-201ENSMUST00000201350 398 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
SmoP56726 Gm4157-201ENSMUST00000211647 679 ntBASIC12.19□□□□□ -0.46
SmoP56726 Sftpd-201ENSMUST00000077136 1275 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
SmoP56726 Tex45-203ENSMUST00000161680 1526 ntAPPRIS P1 TSL 5 BASIC12.19□□□□□ -0.46
SmoP56726 Ddx39b-202ENSMUST00000172549 1770 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
SmoP56726 Aebp2-206ENSMUST00000161335 2524 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
SmoP56726 Sidt1-201ENSMUST00000047446 4279 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
SmoP56726 Tmem206-201ENSMUST00000027940 2246 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
SmoP56726 Bysl-201ENSMUST00000024783 3854 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
SmoP56726 Gfi1b-201ENSMUST00000028156 1681 ntAPPRIS P3 TSL 1 (best) BASIC12.19□□□□□ -0.46
SmoP56726 Sec14l2-201ENSMUST00000003681 2631 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
SmoP56726 Gjc1-202ENSMUST00000092567 1890 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
SmoP56726 4933440M02Rik-202ENSMUST00000205794 1601 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
SmoP56726 Sorcs1-206ENSMUST00000209783 3489 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
SmoP56726 Pqlc2-202ENSMUST00000105801 2756 ntAPPRIS ALT2 TSL 2 BASIC12.18□□□□□ -0.46
SmoP56726 Lrrfip1-204ENSMUST00000097650 2760 ntAPPRIS P3 TSL 1 (best) BASIC12.18□□□□□ -0.46
SmoP56726 Limd2-201ENSMUST00000045923 2950 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
SmoP56726 Map6-201ENSMUST00000068973 3430 ntAPPRIS P3 TSL 1 (best) BASIC12.18□□□□□ -0.46
SmoP56726 Kifc1-201ENSMUST00000114361 2260 ntAPPRIS ALT2 TSL 5 BASIC12.18□□□□□ -0.46
SmoP56726 Lef1-204ENSMUST00000106341 3357 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
SmoP56726 Lef1-202ENSMUST00000066849 3398 ntAPPRIS ALT1 TSL 5 BASIC12.18□□□□□ -0.46
SmoP56726 Itgb4-202ENSMUST00000068981 5584 ntAPPRIS ALT2 TSL 5 BASIC12.18□□□□□ -0.46
SmoP56726 Gm28578-201ENSMUST00000187727 2698 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
SmoP56726 Cacna2d1-203ENSMUST00000101581 3879 ntAPPRIS P2 TSL 1 (best) BASIC12.18□□□□□ -0.46
SmoP56726 Cacna2d1-206ENSMUST00000180204 3882 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
SmoP56726 Zrsr2-201ENSMUST00000090840 3867 ntTSL 2 BASIC12.18□□□□□ -0.46
SmoP56726 Ap1g2-211ENSMUST00000170285 2596 ntAPPRIS P1 TSL 5 BASIC12.18□□□□□ -0.46
SmoP56726 Ush1c-209ENSMUST00000222454 2580 ntAPPRIS ALT2 TSL 5 BASIC12.18□□□□□ -0.46
SmoP56726 Camkk1-201ENSMUST00000092937 3424 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
SmoP56726 Gm11568-201ENSMUST00000107434 1145 ntAPPRIS P1 BASIC12.18□□□□□ -0.46
SmoP56726 Gm11509-201ENSMUST00000117358 325 ntBASIC12.18□□□□□ -0.46
SmoP56726 Wsb2-ps-201ENSMUST00000117937 1217 ntBASIC12.18□□□□□ -0.46
SmoP56726 Gm14249-201ENSMUST00000156239 1017 ntTSL 5 BASIC12.18□□□□□ -0.46
SmoP56726 Ccdc127-205ENSMUST00000162672 677 ntTSL 3 BASIC12.18□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 51.5 ms