Protein–RNA interactions for Protein: P56481

Cckbr, Gastrin/cholecystokinin type B receptor, mousemouse

Predictions only

Length 453 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CckbrP56481 Fbxo46-201ENSMUST00000053109 4873 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
CckbrP56481 BC030500-201ENSMUST00000062978 1605 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
CckbrP56481 Ankrd35-201ENSMUST00000048427 4052 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
CckbrP56481 Epb41l2-207ENSMUST00000218903 4115 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
CckbrP56481 Rara-207ENSMUST00000164748 3129 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
CckbrP56481 Vit-201ENSMUST00000024880 2720 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
CckbrP56481 Rbms1-201ENSMUST00000028347 4436 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
CckbrP56481 Gm22323-201ENSMUST00000103832 109 ntBASIC11.28□□□□□ -0.6
CckbrP56481 Lage3-201ENSMUST00000015433 761 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
CckbrP56481 1700095B10Rik-201ENSMUST00000182349 978 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
CckbrP56481 Gm9230-201ENSMUST00000188228 532 ntBASIC11.28□□□□□ -0.6
CckbrP56481 Gm42902-201ENSMUST00000199508 662 ntTSL 5 BASIC11.28□□□□□ -0.6
CckbrP56481 Gm7118-201ENSMUST00000200167 1003 ntBASIC11.28□□□□□ -0.6
CckbrP56481 AC161537.1-201ENSMUST00000226199 1015 ntBASIC11.28□□□□□ -0.6
CckbrP56481 4930569F06Rik-201ENSMUST00000036821 433 ntBASIC11.28□□□□□ -0.6
CckbrP56481 Ccdc70-202ENSMUST00000070649 961 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
CckbrP56481 Ttc23-202ENSMUST00000107470 1915 ntAPPRIS ALT2 TSL 5 BASIC11.28□□□□□ -0.6
CckbrP56481 Pax7-202ENSMUST00000174681 1725 ntAPPRIS ALT1 TSL 5 BASIC11.28□□□□□ -0.6
CckbrP56481 Hnf1b-202ENSMUST00000108113 2376 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
CckbrP56481 Gm43677-201ENSMUST00000198098 2378 ntBASIC11.28□□□□□ -0.6
CckbrP56481 Gm2238-201ENSMUST00000192074 3669 ntBASIC11.28□□□□□ -0.6
CckbrP56481 Gm9361-201ENSMUST00000198695 1507 ntBASIC11.28□□□□□ -0.6
CckbrP56481 Fbxl22-201ENSMUST00000056890 3935 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
CckbrP56481 Car10-201ENSMUST00000042943 3293 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
CckbrP56481 Tnn-202ENSMUST00000131919 3987 ntTSL 5 BASIC11.28□□□□□ -0.6
CckbrP56481 Accs-201ENSMUST00000041593 2036 ntAPPRIS P3 TSL 1 (best) BASIC11.28□□□□□ -0.6
CckbrP56481 Cngb1-203ENSMUST00000120044 3243 ntAPPRIS ALT2 TSL 5 BASIC11.28□□□□□ -0.6
CckbrP56481 Wdr18-201ENSMUST00000045247 3911 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
CckbrP56481 Abat-201ENSMUST00000065987 4636 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
CckbrP56481 Arl8b-201ENSMUST00000032196 4443 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
CckbrP56481 Foxp1-205ENSMUST00000113324 2121 ntTSL 5 BASIC11.27□□□□□ -0.6
CckbrP56481 Foxp1-207ENSMUST00000113328 2121 ntTSL 1 (best) BASIC11.27□□□□□ -0.6
CckbrP56481 Foxp1-228ENSMUST00000177307 2121 ntTSL 1 (best) BASIC11.27□□□□□ -0.6
CckbrP56481 Gm15326-202ENSMUST00000128198 1422 ntTSL 1 (best) BASIC11.27□□□□□ -0.6
CckbrP56481 Gm18626-201ENSMUST00000221512 1409 ntBASIC11.27□□□□□ -0.6
CckbrP56481 Stpg3-201ENSMUST00000043774 1430 ntAPPRIS P2 TSL 1 (best) BASIC11.27□□□□□ -0.6
CckbrP56481 Cyp4f17-201ENSMUST00000165999 1693 ntAPPRIS P1 TSL 5 BASIC11.27□□□□□ -0.6
CckbrP56481 Cr1l-201ENSMUST00000075451 1651 ntAPPRIS P2 TSL 1 (best) BASIC11.27□□□□□ -0.6
CckbrP56481 Usp3-211ENSMUST00000174387 1901 ntTSL 5 BASIC11.27□□□□□ -0.6
CckbrP56481 Abcc10-201ENSMUST00000047970 4885 ntAPPRIS ALT2 TSL 1 (best) BASIC11.27□□□□□ -0.6
CckbrP56481 Hnrnpa2b1-203ENSMUST00000114459 1728 ntAPPRIS ALT1 TSL 5 BASIC11.27□□□□□ -0.61
CckbrP56481 Slc25a45-206ENSMUST00000155697 1960 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
CckbrP56481 Lnx1-209ENSMUST00000153543 2208 ntTSL 5 BASIC11.27□□□□□ -0.61
CckbrP56481 Agtrap-201ENSMUST00000030865 3996 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
CckbrP56481 Kif26b-201ENSMUST00000160789 6216 ntAPPRIS ALT2 TSL 1 (best) BASIC11.27□□□□□ -0.61
CckbrP56481 Rapgef3-203ENSMUST00000126854 4005 ntAPPRIS P2 TSL 1 (best) BASIC11.27□□□□□ -0.61
CckbrP56481 Gm14644-201ENSMUST00000116671 647 ntBASIC11.27□□□□□ -0.61
CckbrP56481 Gm13061-201ENSMUST00000137962 664 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
CckbrP56481 Glmp-201ENSMUST00000001454 1017 ntTSL 5 BASIC11.27□□□□□ -0.61
CckbrP56481 Gm15276-201ENSMUST00000145953 498 ntBASIC11.27□□□□□ -0.61
CckbrP56481 Gm14809-201ENSMUST00000152025 695 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
CckbrP56481 Gm25668-201ENSMUST00000157700 129 ntBASIC11.27□□□□□ -0.61
CckbrP56481 AC158523.3-201ENSMUST00000220664 864 ntTSL 5 BASIC11.27□□□□□ -0.61
CckbrP56481 AC154171.1-201ENSMUST00000224610 643 ntBASIC11.27□□□□□ -0.61
CckbrP56481 Tnfrsf4-201ENSMUST00000030952 1030 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
CckbrP56481 H1foo-201ENSMUST00000037831 1113 ntAPPRIS P3 TSL 1 (best) BASIC11.27□□□□□ -0.61
CckbrP56481 Polr2e-201ENSMUST00000004786 1148 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
CckbrP56481 Klk1b27-201ENSMUST00000079859 889 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
CckbrP56481 Mirlet7c-2-201ENSMUST00000083674 95 ntBASIC11.27□□□□□ -0.61
CckbrP56481 Gm16519-201ENSMUST00000092011 489 ntAPPRIS P1 BASIC11.27□□□□□ -0.61
CckbrP56481 Adamts1-201ENSMUST00000023610 4884 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
CckbrP56481 Tcp10b-202ENSMUST00000116666 2588 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
CckbrP56481 Abcd1-202ENSMUST00000114461 2323 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
CckbrP56481 Stat5a-203ENSMUST00000107357 3605 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
CckbrP56481 Dnajb1-202ENSMUST00000212300 2854 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
CckbrP56481 Arhgap4-203ENSMUST00000114405 6299 ntAPPRIS ALT2 TSL 5 BASIC11.27□□□□□ -0.61
CckbrP56481 Runx1-202ENSMUST00000113956 4738 ntAPPRIS P3 TSL 1 (best) BASIC11.27□□□□□ -0.61
CckbrP56481 BC024139-201ENSMUST00000054022 2623 ntAPPRIS P2 TSL 1 (best) BASIC11.27□□□□□ -0.61
CckbrP56481 Gm8862-201ENSMUST00000198379 1346 ntBASIC11.27□□□□□ -0.61
CckbrP56481 Kalrn-209ENSMUST00000114963 3207 ntTSL 5 BASIC11.27□□□□□ -0.61
CckbrP56481 Dnmt1-201ENSMUST00000004202 5367 ntAPPRIS P4 TSL 1 (best) BASIC11.27□□□□□ -0.61
CckbrP56481 Rprd1b-203ENSMUST00000109518 4399 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
CckbrP56481 1700003D09Rik-201ENSMUST00000141929 1389 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
CckbrP56481 Zfp384-202ENSMUST00000054553 2451 ntTSL 5 BASIC11.27□□□□□ -0.61
CckbrP56481 H2-T10-202ENSMUST00000174382 1699 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
CckbrP56481 Gm5053-201ENSMUST00000208361 1678 ntBASIC11.27□□□□□ -0.61
CckbrP56481 Dpysl5-201ENSMUST00000088081 5022 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
CckbrP56481 BC030867-201ENSMUST00000100392 2547 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
CckbrP56481 Tdrd9-201ENSMUST00000079009 4809 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
CckbrP56481 Hnrnpf-209ENSMUST00000180020 2280 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
CckbrP56481 Rdh8-201ENSMUST00000066387 1405 ntAPPRIS P1 TSL 2 BASIC11.26□□□□□ -0.61
CckbrP56481 Slc39a14-202ENSMUST00000068044 4926 ntAPPRIS P3 TSL 5 BASIC11.26□□□□□ -0.61
CckbrP56481 Sod2-201ENSMUST00000007012 3824 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
CckbrP56481 Izumo1-201ENSMUST00000033100 1493 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
CckbrP56481 Zbtb49-201ENSMUST00000094833 2978 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
CckbrP56481 Epb41l1-206ENSMUST00000109577 6251 ntTSL 5 BASIC11.26□□□□□ -0.61
CckbrP56481 Lrrfip2-213ENSMUST00000216430 1525 ntTSL 5 BASIC11.26□□□□□ -0.61
CckbrP56481 Tbc1d24-209ENSMUST00000201301 4261 ntTSL 5 BASIC11.26□□□□□ -0.61
CckbrP56481 BC052040-203ENSMUST00000166472 2770 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
CckbrP56481 Vwa7-201ENSMUST00000007245 4313 ntAPPRIS P3 TSL 1 (best) BASIC11.26□□□□□ -0.61
CckbrP56481 Capn8-202ENSMUST00000168514 2483 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
CckbrP56481 Tcf4-205ENSMUST00000114980 2192 ntAPPRIS P1 TSL 5 BASIC11.26□□□□□ -0.61
CckbrP56481 Dmbt1-201ENSMUST00000084509 6243 ntAPPRIS P3 TSL 1 (best) BASIC11.26□□□□□ -0.61
CckbrP56481 Kansl3-201ENSMUST00000010597 4663 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
CckbrP56481 Kif2c-201ENSMUST00000065896 2842 ntAPPRIS P3 TSL 1 (best) BASIC11.26□□□□□ -0.61
CckbrP56481 Stk10-201ENSMUST00000102821 5026 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
CckbrP56481 Serpina16-202ENSMUST00000164148 1582 ntAPPRIS P1 TSL 5 BASIC11.26□□□□□ -0.61
CckbrP56481 Pax5-204ENSMUST00000107826 1228 ntTSL 5 BASIC11.26□□□□□ -0.61
CckbrP56481 C330007P06Rik-203ENSMUST00000115249 1145 ntTSL 5 BASIC11.26□□□□□ -0.61
CckbrP56481 1700003G18Rik-201ENSMUST00000140689 633 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Retrieved 100 of 76,532 protein–RNA pairs in 69.1 ms