Protein–RNA interactions for Protein: P56399

Usp5, Ubiquitin carboxyl-terminal hydrolase 5, mousemouse

Known RBP Predictions only

Length 858 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp5P56399 Gm45278-201ENSMUST00000209650 2414 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Usp5P56399 4930488B22Rik-201ENSMUST00000172500 1722 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Usp5P56399 Sorcs1-203ENSMUST00000164039 7241 ntAPPRIS ALT1 TSL 5 BASIC14.17□□□□□ -0.14
Usp5P56399 Txndc12-201ENSMUST00000030296 1359 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Usp5P56399 Gramd2-201ENSMUST00000098661 1368 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Usp5P56399 Amer2-201ENSMUST00000022561 10506 ntAPPRIS P1 BASIC14.17□□□□□ -0.14
Usp5P56399 Gm5780-201ENSMUST00000217774 1834 ntBASIC14.17□□□□□ -0.14
Usp5P56399 Glp2r-202ENSMUST00000051765 4873 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Usp5P56399 Art3-201ENSMUST00000113083 1561 ntAPPRIS P3 TSL 5 BASIC14.17□□□□□ -0.14
Usp5P56399 Slc14a1-203ENSMUST00000160639 2047 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
Usp5P56399 Syt1-202ENSMUST00000105276 4820 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Usp5P56399 Wdr25-202ENSMUST00000167816 2657 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
Usp5P56399 Alpi-201ENSMUST00000113270 2337 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Usp5P56399 Pex1-201ENSMUST00000006061 4433 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
Usp5P56399 Cd200r1-201ENSMUST00000057488 1892 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Usp5P56399 Brd3-202ENSMUST00000077737 5272 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
Usp5P56399 Crem-233ENSMUST00000154135 2530 ntTSL 5 BASIC14.16□□□□□ -0.14
Usp5P56399 Ripk3-202ENSMUST00000168716 1964 ntTSL 5 BASIC14.16□□□□□ -0.14
Usp5P56399 Gm36855-203ENSMUST00000216660 1406 ntTSL 5 BASIC14.16□□□□□ -0.14
Usp5P56399 Kif28-202ENSMUST00000211943 2643 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
Usp5P56399 Lexm-204ENSMUST00000189032 1549 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Usp5P56399 Spryd7-201ENSMUST00000022497 4002 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Usp5P56399 Hnrnpf-209ENSMUST00000180020 2280 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Usp5P56399 Cyb5rl-201ENSMUST00000030364 2360 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Usp5P56399 Prr15l-203ENSMUST00000107633 930 ntAPPRIS P1 TSL 2 BASIC14.16□□□□□ -0.14
Usp5P56399 Gm12217-201ENSMUST00000118858 696 ntBASIC14.16□□□□□ -0.14
Usp5P56399 Gm15906-201ENSMUST00000124746 323 ntTSL 5 BASIC14.16□□□□□ -0.14
Usp5P56399 Atp10d-206ENSMUST00000169617 761 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Usp5P56399 Mir7070-201ENSMUST00000183657 86 ntBASIC14.16□□□□□ -0.14
Usp5P56399 Mir6927-201ENSMUST00000184494 71 ntBASIC14.16□□□□□ -0.14
Usp5P56399 Gm18827-201ENSMUST00000188341 790 ntBASIC14.16□□□□□ -0.14
Usp5P56399 Gm18711-201ENSMUST00000199341 750 ntBASIC14.16□□□□□ -0.14
Usp5P56399 Gm19817-201ENSMUST00000199764 2132 ntBASIC14.16□□□□□ -0.14
Usp5P56399 Gm43962-201ENSMUST00000203898 190 ntBASIC14.16□□□□□ -0.14
Usp5P56399 Gm45021-201ENSMUST00000204521 369 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
Usp5P56399 Gm44934-201ENSMUST00000208941 238 ntTSL 5 BASIC14.16□□□□□ -0.14
Usp5P56399 Bet1l-207ENSMUST00000211527 298 ntTSL 5 BASIC14.16□□□□□ -0.14
Usp5P56399 Mpzl2-205ENSMUST00000217097 1175 ntTSL 5 BASIC14.16□□□□□ -0.14
Usp5P56399 AC155637.1-201ENSMUST00000218560 636 ntBASIC14.16□□□□□ -0.14
Usp5P56399 Cga-201ENSMUST00000029975 687 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Usp5P56399 Nmral1-201ENSMUST00000074970 1155 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Usp5P56399 Islr-201ENSMUST00000041477 2223 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Usp5P56399 1700003D09Rik-201ENSMUST00000141929 1389 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Usp5P56399 Gm18782-201ENSMUST00000209023 1399 ntBASIC14.16□□□□□ -0.14
Usp5P56399 Serinc2-202ENSMUST00000120126 1452 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
Usp5P56399 0610037L13Rik-207ENSMUST00000125107 1551 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Usp5P56399 Dysf-216ENSMUST00000204987 6474 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
Usp5P56399 Mrps17-206ENSMUST00000121339 2182 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Usp5P56399 BC052040-203ENSMUST00000166472 2770 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Usp5P56399 Terf2ip-201ENSMUST00000052138 3560 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Usp5P56399 Gm13187-202ENSMUST00000133873 1321 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Usp5P56399 Rorc-204ENSMUST00000200009 1543 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Usp5P56399 Rasgef1a-202ENSMUST00000203482 2227 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
Usp5P56399 Adcyap1r1-201ENSMUST00000070736 3695 ntAPPRIS P4 TSL 1 (best) BASIC14.15□□□□□ -0.14
Usp5P56399 Chrd-201ENSMUST00000007171 3275 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Usp5P56399 Gm44292-201ENSMUST00000205194 2364 ntBASIC14.15□□□□□ -0.14
Usp5P56399 Ptprr-204ENSMUST00000128399 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Usp5P56399 Ldb3-203ENSMUST00000022330 1586 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Usp5P56399 Spock1-202ENSMUST00000185502 4614 ntAPPRIS ALT1 TSL 5 BASIC14.15□□□□□ -0.14
Usp5P56399 Tcf12-201ENSMUST00000034755 4621 ntAPPRIS ALT1 TSL 5 BASIC14.15□□□□□ -0.14
Usp5P56399 Ccr4-202ENSMUST00000215425 1382 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Usp5P56399 Col14a1-201ENSMUST00000023053 6457 ntAPPRIS ALT1 TSL 5 BASIC14.15□□□□□ -0.14
Usp5P56399 Gm7857-201ENSMUST00000117957 358 ntBASIC14.15□□□□□ -0.14
Usp5P56399 Dnajb6-202ENSMUST00000012734 1024 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Usp5P56399 Gm14966-202ENSMUST00000129675 649 ntTSL 2 BASIC14.15□□□□□ -0.14
Usp5P56399 Gm26602-201ENSMUST00000181321 285 ntAPPRIS P1 BASIC14.15□□□□□ -0.14
Usp5P56399 Gm4034-201ENSMUST00000187674 480 ntBASIC14.15□□□□□ -0.14
Usp5P56399 4930479H17Rik-201ENSMUST00000208824 292 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Usp5P56399 Gm44710-201ENSMUST00000208885 471 ntTSL 2 BASIC14.15□□□□□ -0.14
Usp5P56399 Gm45799-208ENSMUST00000211054 490 ntAPPRIS P2 TSL 3 BASIC14.15□□□□□ -0.14
Usp5P56399 Gm19208-201ENSMUST00000213861 912 ntBASIC14.15□□□□□ -0.14
Usp5P56399 Gm18730-201ENSMUST00000218038 343 ntBASIC14.15□□□□□ -0.14
Usp5P56399 Gm31793-201ENSMUST00000218557 415 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Usp5P56399 Ggps1-204ENSMUST00000221713 667 ntTSL 3 BASIC14.15□□□□□ -0.14
Usp5P56399 Dnajc4-201ENSMUST00000025915 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Usp5P56399 Ppie-201ENSMUST00000030404 1188 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Usp5P56399 Prr15l-202ENSMUST00000062172 1242 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Usp5P56399 Riok1-201ENSMUST00000021866 2738 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Usp5P56399 Tmc4-202ENSMUST00000121743 2204 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Usp5P56399 Dnajc5-201ENSMUST00000072334 6578 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Usp5P56399 Tcf12-218ENSMUST00000184783 3489 ntAPPRIS P3 TSL 5 BASIC14.15□□□□□ -0.14
Usp5P56399 Gm29100-201ENSMUST00000187564 4410 ntBASIC14.15□□□□□ -0.14
Usp5P56399 Csf1-202ENSMUST00000118593 3058 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Usp5P56399 Ttpa-203ENSMUST00000121491 2862 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Usp5P56399 4930554G24Rik-201ENSMUST00000126260 1603 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Usp5P56399 Col14a1-202ENSMUST00000110217 6457 ntAPPRIS ALT1 TSL 5 BASIC14.15□□□□□ -0.14
Usp5P56399 Rps6ka6-203ENSMUST00000096348 4151 ntAPPRIS ALT2 TSL 2 BASIC14.15□□□□□ -0.14
Usp5P56399 Srr-203ENSMUST00000108448 3239 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
Usp5P56399 Mfsd4a-207ENSMUST00000159038 1957 ntAPPRIS P2 TSL 5 BASIC14.14□□□□□ -0.15
Usp5P56399 Gm43417-201ENSMUST00000201586 5207 ntBASIC14.14□□□□□ -0.15
Usp5P56399 4732471J01Rik-204ENSMUST00000206436 2430 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Usp5P56399 Mafk-202ENSMUST00000110836 3097 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
Usp5P56399 Oprm1-205ENSMUST00000078634 1695 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Usp5P56399 Tmem230-203ENSMUST00000110164 2957 ntAPPRIS P1 TSL 2 BASIC14.14□□□□□ -0.15
Usp5P56399 Epha5-202ENSMUST00000113398 4830 ntTSL 5 BASIC14.14□□□□□ -0.15
Usp5P56399 Klf11-201ENSMUST00000020982 4086 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Usp5P56399 Pomgnt1-205ENSMUST00000121052 2693 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
Usp5P56399 1700030J22Rik-202ENSMUST00000213068 1482 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Usp5P56399 BC055324-202ENSMUST00000097493 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Usp5P56399 Accs-201ENSMUST00000041593 2036 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 62.9 ms