Protein–RNA interactions for Protein: P55288

Cdh11, Cadherin-11, mousemouse

Predictions only

Length 796 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh11P55288 Umod-201ENSMUST00000033263 2625 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Cdh11P55288 Gfap-201ENSMUST00000067444 2648 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Cdh11P55288 Trappc8-202ENSMUST00000097658 2703 ntAPPRIS P3 TSL 1 (best) BASIC11.1□□□□□ -0.63
Cdh11P55288 Trpm7-202ENSMUST00000103224 7107 ntAPPRIS P3 TSL 1 (best) BASIC11.1□□□□□ -0.63
Cdh11P55288 Rab3d-203ENSMUST00000122211 3886 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Cdh11P55288 Hs3st1-202ENSMUST00000117944 1686 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Cdh11P55288 Haus6-201ENSMUST00000070607 6158 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Cdh11P55288 Sowahc-201ENSMUST00000182161 4482 ntAPPRIS P1 BASIC11.1□□□□□ -0.63
Cdh11P55288 Vsig10l-201ENSMUST00000107977 3836 ntAPPRIS ALT2 TSL 5 BASIC11.1□□□□□ -0.63
Cdh11P55288 Spock3-203ENSMUST00000118003 2860 ntAPPRIS P3 TSL 5 BASIC11.1□□□□□ -0.63
Cdh11P55288 Tubgcp2-201ENSMUST00000026547 2960 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Cdh11P55288 Stk32b-201ENSMUST00000094836 3458 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Cdh11P55288 Pex26-201ENSMUST00000088561 4093 ntAPPRIS P3 TSL 1 (best) BASIC11.09□□□□□ -0.63
Cdh11P55288 Cldn18-204ENSMUST00000136429 1409 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Cdh11P55288 AC130671.2-201ENSMUST00000227224 1621 ntBASIC11.09□□□□□ -0.63
Cdh11P55288 Slc6a16-201ENSMUST00000179310 2007 ntAPPRIS ALT2 TSL 5 BASIC11.09□□□□□ -0.63
Cdh11P55288 Acsf3-201ENSMUST00000015160 2206 ntAPPRIS P2 TSL 5 BASIC11.09□□□□□ -0.63
Cdh11P55288 Trim46-202ENSMUST00000090924 2721 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Cdh11P55288 4833422C13Rik-202ENSMUST00000160385 2828 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Cdh11P55288 Gucy1a3-204ENSMUST00000193924 4710 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Cdh11P55288 Pigm-201ENSMUST00000052455 7554 ntAPPRIS P1 BASIC11.09□□□□□ -0.63
Cdh11P55288 Rims4-201ENSMUST00000044734 4962 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Cdh11P55288 Tfcp2-201ENSMUST00000009877 3250 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Cdh11P55288 Sfxn3-201ENSMUST00000062213 2966 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Cdh11P55288 Tex9-209ENSMUST00000184125 2794 ntAPPRIS P2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Cdh11P55288 Polr1b-201ENSMUST00000028874 2769 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Cdh11P55288 Gemin2-201ENSMUST00000021379 1588 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Cdh11P55288 Gm12968-201ENSMUST00000138291 1454 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Cdh11P55288 Gpr179-201ENSMUST00000093942 9219 ntAPPRIS P1 TSL 5 BASIC11.09□□□□□ -0.63
Cdh11P55288 Trav4d-3-201ENSMUST00000103592 331 ntAPPRIS P1 BASIC11.09□□□□□ -0.63
Cdh11P55288 Trav4d-4-201ENSMUST00000103600 354 ntAPPRIS P1 BASIC11.09□□□□□ -0.63
Cdh11P55288 Trav4n-3-201ENSMUST00000103618 331 ntAPPRIS P1 BASIC11.09□□□□□ -0.63
Cdh11P55288 Trav4n-4-201ENSMUST00000103627 354 ntAPPRIS P1 BASIC11.09□□□□□ -0.63
Cdh11P55288 Trav4-3-201ENSMUST00000103655 411 ntAPPRIS P1 BASIC11.09□□□□□ -0.63
Cdh11P55288 Trav4-4-dv10-201ENSMUST00000103663 361 ntAPPRIS P1 BASIC11.09□□□□□ -0.63
Cdh11P55288 Gm14921-201ENSMUST00000118643 908 ntBASIC11.09□□□□□ -0.63
Cdh11P55288 0610037L13Rik-205ENSMUST00000119394 741 ntTSL 3 BASIC11.09□□□□□ -0.63
Cdh11P55288 Gm13350-201ENSMUST00000120519 479 ntBASIC11.09□□□□□ -0.63
Cdh11P55288 Nr2f1-203ENSMUST00000127137 991 ntTSL 5 BASIC11.09□□□□□ -0.63
Cdh11P55288 Gm5637-201ENSMUST00000153890 1119 ntBASIC11.09□□□□□ -0.63
Cdh11P55288 Gm20457-201ENSMUST00000173374 682 ntTSL 3 BASIC11.09□□□□□ -0.63
Cdh11P55288 Gm2164-201ENSMUST00000184062 424 ntTSL 2 BASIC11.09□□□□□ -0.63
Cdh11P55288 Gm27230-202ENSMUST00000184671 857 ntTSL 3 BASIC11.09□□□□□ -0.63
Cdh11P55288 Gm18584-201ENSMUST00000203098 964 ntBASIC11.09□□□□□ -0.63
Cdh11P55288 Gm6334-201ENSMUST00000207083 228 ntBASIC11.09□□□□□ -0.63
Cdh11P55288 Gm5781-201ENSMUST00000219792 443 ntBASIC11.09□□□□□ -0.63
Cdh11P55288 H2-Oa-201ENSMUST00000025192 1088 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Cdh11P55288 Olfr1368-201ENSMUST00000055298 1064 ntAPPRIS P1 BASIC11.09□□□□□ -0.63
Cdh11P55288 Rassf8-202ENSMUST00000058538 1131 ntBASIC11.09□□□□□ -0.63
Cdh11P55288 Gm17080-201ENSMUST00000087588 811 ntTSL 5 BASIC11.09□□□□□ -0.63
Cdh11P55288 Gm26857-201ENSMUST00000181580 3347 ntTSL 5 BASIC11.09□□□□□ -0.63
Cdh11P55288 Cald1-205ENSMUST00000115027 4777 ntTSL 5 BASIC11.09□□□□□ -0.63
Cdh11P55288 Tmeff2-202ENSMUST00000114565 2718 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Cdh11P55288 Chrdl1-204ENSMUST00000166406 2605 ntAPPRIS P3 TSL 1 (best) BASIC11.09□□□□□ -0.63
Cdh11P55288 2310035C23Rik-210ENSMUST00000190501 3852 ntAPPRIS ALT2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Cdh11P55288 Gm10544-201ENSMUST00000180516 2239 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Cdh11P55288 Slc39a14-202ENSMUST00000068044 4926 ntAPPRIS P3 TSL 5 BASIC11.09□□□□□ -0.63
Cdh11P55288 Tgfb2-206ENSMUST00000195201 3485 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Cdh11P55288 Hcls1-201ENSMUST00000023531 2016 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Cdh11P55288 Rab17-201ENSMUST00000027529 1831 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Cdh11P55288 Gm2916-202ENSMUST00000181779 1702 ntAPPRIS P1 TSL 5 BASIC11.09□□□□□ -0.63
Cdh11P55288 Igsf3-201ENSMUST00000043983 7371 ntAPPRIS P2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Cdh11P55288 Arrb1-201ENSMUST00000032995 3715 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Cdh11P55288 Meaf6-205ENSMUST00000154689 4550 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Cdh11P55288 Grm5-201ENSMUST00000107263 3516 ntAPPRIS P3 TSL 1 (best) BASIC11.09□□□□□ -0.63
Cdh11P55288 Cdc14a-201ENSMUST00000090464 4485 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Cdh11P55288 Gdpd2-201ENSMUST00000019503 2495 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Cdh11P55288 Ncoa6-203ENSMUST00000109670 7101 ntAPPRIS P2 TSL 5 BASIC11.09□□□□□ -0.63
Cdh11P55288 Gm39204-201ENSMUST00000210045 1307 ntTSL 5 BASIC11.09□□□□□ -0.63
Cdh11P55288 Mei1-201ENSMUST00000089178 3974 ntAPPRIS ALT2 TSL 5 BASIC11.09□□□□□ -0.63
Cdh11P55288 Pcdhga4-201ENSMUST00000194418 4727 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Cdh11P55288 Dip2a-201ENSMUST00000036033 6322 ntAPPRIS P2 TSL 5 BASIC11.08□□□□□ -0.63
Cdh11P55288 Drd1-202ENSMUST00000221470 3576 ntAPPRIS ALT2 TSL 1 (best) BASIC11.08□□□□□ -0.63
Cdh11P55288 Gimap5-201ENSMUST00000055558 1953 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Cdh11P55288 Plod3-201ENSMUST00000004968 3280 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Cdh11P55288 Slc25a22-203ENSMUST00000106007 2546 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Cdh11P55288 Gm29050-201ENSMUST00000190732 2528 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Cdh11P55288 Syt7-202ENSMUST00000076968 6624 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Cdh11P55288 Srrt-212ENSMUST00000199243 2988 ntAPPRIS ALT2 TSL 1 (best) BASIC11.08□□□□□ -0.64
Cdh11P55288 Cttnbp2nl-201ENSMUST00000077548 4946 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Cdh11P55288 Frmpd2-203ENSMUST00000208577 5192 ntAPPRIS P1 TSL 5 BASIC11.08□□□□□ -0.64
Cdh11P55288 F730043M19Rik-204ENSMUST00000148740 3312 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Cdh11P55288 Nxph2-201ENSMUST00000102945 2579 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Cdh11P55288 L3mbtl2-208ENSMUST00000174229 2578 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Cdh11P55288 Zfp108-203ENSMUST00000206777 2562 ntAPPRIS P2 TSL 1 (best) BASIC11.08□□□□□ -0.64
Cdh11P55288 Alkbh3-202ENSMUST00000111240 1395 ntTSL 5 BASIC11.08□□□□□ -0.64
Cdh11P55288 Gm37885-201ENSMUST00000192568 1391 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Cdh11P55288 Gm45902-202ENSMUST00000140494 2390 ntAPPRIS P1 TSL 2 BASIC11.08□□□□□ -0.64
Cdh11P55288 Fhit-206ENSMUST00000162278 981 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Cdh11P55288 Gm7584-201ENSMUST00000175829 940 ntBASIC11.08□□□□□ -0.64
Cdh11P55288 Gm28085-201ENSMUST00000189281 1137 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Cdh11P55288 Mb-201ENSMUST00000019037 966 ntAPPRIS P1 TSL 2 BASIC11.08□□□□□ -0.64
Cdh11P55288 Gm36937-201ENSMUST00000192957 429 ntTSL 3 BASIC11.08□□□□□ -0.64
Cdh11P55288 AC098716.1-201ENSMUST00000213527 703 ntBASIC11.08□□□□□ -0.64
Cdh11P55288 Gm9257-201ENSMUST00000221254 232 ntBASIC11.08□□□□□ -0.64
Cdh11P55288 Polr2e-201ENSMUST00000004786 1148 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Cdh11P55288 4930442H23Rik-201ENSMUST00000056086 1245 ntAPPRIS P1 BASIC11.08□□□□□ -0.64
Cdh11P55288 Olfr171-201ENSMUST00000079891 945 ntAPPRIS P2 BASIC11.08□□□□□ -0.64
Cdh11P55288 Pde4d-201ENSMUST00000074103 2167 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Cdh11P55288 Gtf2e1-201ENSMUST00000023525 3084 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Retrieved 100 of 76,532 protein–RNA pairs in 52.8 ms