Protein–RNA interactions for Protein: P55066

Ncan, Neurocan core protein, mousemouse

Predictions only

Length 1,268 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NcanP55066 Ints3-203ENSMUST00000196530 3778 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
NcanP55066 Mfsd4b4-202ENSMUST00000178563 3523 ntTSL 5 BASIC12.75□□□□□ -0.37
NcanP55066 Tap2-201ENSMUST00000025197 3442 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
NcanP55066 Siglecf-203ENSMUST00000122423 2607 ntAPPRIS P3 TSL 1 (best) BASIC12.75□□□□□ -0.37
NcanP55066 Tmem198b-201ENSMUST00000051011 2335 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
NcanP55066 Ccdc25-201ENSMUST00000022614 2230 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
NcanP55066 Zfp651-201ENSMUST00000093772 6353 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
NcanP55066 Jph2-201ENSMUST00000017961 4211 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
NcanP55066 Slc30a3-206ENSMUST00000202740 1989 ntTSL 5 BASIC12.74□□□□□ -0.37
NcanP55066 Chit1-202ENSMUST00000159963 1815 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
NcanP55066 Tipin-205ENSMUST00000216594 1841 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
NcanP55066 Psmc3-201ENSMUST00000002171 1819 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
NcanP55066 Atp9a-204ENSMUST00000109177 3456 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
NcanP55066 Safb2-201ENSMUST00000075510 3277 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
NcanP55066 Trim26-210ENSMUST00000179968 3203 ntAPPRIS ALT2 TSL 5 BASIC12.74□□□□□ -0.37
NcanP55066 Adcyap1r1-206ENSMUST00000167234 1575 ntAPPRIS ALT2 TSL 5 BASIC12.74□□□□□ -0.37
NcanP55066 4930555B11Rik-201ENSMUST00000123210 1533 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
NcanP55066 Srsf5-201ENSMUST00000094693 1527 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
NcanP55066 Lynx1-201ENSMUST00000023259 4023 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
NcanP55066 Tnfrsf9-203ENSMUST00000105671 1278 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
NcanP55066 Polr2i-203ENSMUST00000108193 488 ntTSL 3 BASIC12.74□□□□□ -0.37
NcanP55066 Gm12961-201ENSMUST00000120507 1050 ntBASIC12.74□□□□□ -0.37
NcanP55066 Zfp961-203ENSMUST00000132848 781 ntTSL 5 BASIC12.74□□□□□ -0.37
NcanP55066 Bach2it1-201ENSMUST00000133451 481 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
NcanP55066 Gm22379-201ENSMUST00000157480 131 ntBASIC12.74□□□□□ -0.37
NcanP55066 Gm45613-201ENSMUST00000210718 443 ntTSL 3 BASIC12.74□□□□□ -0.37
NcanP55066 Pbld1-204ENSMUST00000219045 602 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
NcanP55066 AC122346.3-201ENSMUST00000223983 306 ntBASIC12.74□□□□□ -0.37
NcanP55066 Gzmk-201ENSMUST00000038212 1028 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
NcanP55066 Fam212a-201ENSMUST00000048568 1025 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
NcanP55066 Krtap4-13-201ENSMUST00000050106 815 ntAPPRIS P1 BASIC12.74□□□□□ -0.37
NcanP55066 Rpl29-201ENSMUST00000059802 710 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
NcanP55066 4930555K19Rik-201ENSMUST00000060066 171 ntBASIC12.74□□□□□ -0.37
NcanP55066 Tnfrsf9-202ENSMUST00000060901 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
NcanP55066 Rnf183-201ENSMUST00000079420 573 ntAPPRIS P1 BASIC12.74□□□□□ -0.37
NcanP55066 Mir326-201ENSMUST00000083637 95 ntBASIC12.74□□□□□ -0.37
NcanP55066 Lgals1-201ENSMUST00000089377 800 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
NcanP55066 1200007C13Rik-201ENSMUST00000143649 2455 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
NcanP55066 Uba6-202ENSMUST00000113373 3504 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
NcanP55066 Efhc1-201ENSMUST00000038447 2146 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
NcanP55066 Tonsl-207ENSMUST00000168185 4235 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
NcanP55066 Ripk3-202ENSMUST00000168716 1964 ntTSL 5 BASIC12.74□□□□□ -0.37
NcanP55066 Def8-203ENSMUST00000093049 1909 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
NcanP55066 Tfap2a-202ENSMUST00000110193 2863 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
NcanP55066 Enc1-201ENSMUST00000041623 4737 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
NcanP55066 Gm21358-201ENSMUST00000191645 1659 ntBASIC12.73□□□□□ -0.37
NcanP55066 Fam208b-201ENSMUST00000096069 8338 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
NcanP55066 Inhba-201ENSMUST00000042603 6390 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
NcanP55066 Srr-202ENSMUST00000108447 3138 ntTSL 5 BASIC12.73□□□□□ -0.37
NcanP55066 Prkca-202ENSMUST00000100302 2265 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
NcanP55066 Lamc2-201ENSMUST00000027753 5164 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
NcanP55066 Dtnb-223ENSMUST00000174547 2112 ntTSL 5 BASIC12.73□□□□□ -0.37
NcanP55066 Tmprss9-201ENSMUST00000105333 3497 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
NcanP55066 Obsl1-201ENSMUST00000113565 3379 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
NcanP55066 Mrps23-201ENSMUST00000024486 1332 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
NcanP55066 Sesn1-201ENSMUST00000041438 2600 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
NcanP55066 Lrrc8e-201ENSMUST00000053035 3878 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
NcanP55066 Banf2-202ENSMUST00000110032 409 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
NcanP55066 Nptn-202ENSMUST00000114121 863 ntTSL 5 BASIC12.73□□□□□ -0.37
NcanP55066 Rpl35a-204ENSMUST00000115078 500 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
NcanP55066 Gm12736-201ENSMUST00000119330 236 ntBASIC12.73□□□□□ -0.37
NcanP55066 Utp23-202ENSMUST00000136129 779 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
NcanP55066 Gm11634-201ENSMUST00000154147 755 ntAPPRIS ALT2 TSL 3 BASIC12.73□□□□□ -0.37
NcanP55066 1810020O05Rik-201ENSMUST00000162547 1047 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
NcanP55066 Gm25677-201ENSMUST00000174983 72 ntBASIC12.73□□□□□ -0.37
NcanP55066 Mir6953-201ENSMUST00000184745 68 ntBASIC12.73□□□□□ -0.37
NcanP55066 Mllt11-204ENSMUST00000198948 793 ntAPPRIS P1 TSL 3 BASIC12.73□□□□□ -0.37
NcanP55066 Gm43380-201ENSMUST00000200421 220 ntBASIC12.73□□□□□ -0.37
NcanP55066 Gm39288-201ENSMUST00000210554 446 ntBASIC12.73□□□□□ -0.37
NcanP55066 D730050B12Rik-201ENSMUST00000223149 585 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
NcanP55066 Nmi-201ENSMUST00000028314 1291 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
NcanP55066 Banf2-201ENSMUST00000037722 571 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
NcanP55066 Hax1-201ENSMUST00000079724 1139 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
NcanP55066 Tbc1d30-201ENSMUST00000064107 5695 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
NcanP55066 Arid3a-203ENSMUST00000105377 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
NcanP55066 Neu2-204ENSMUST00000165109 1824 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
NcanP55066 Pdzk1-201ENSMUST00000058865 2406 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
NcanP55066 Leng8-203ENSMUST00000121270 3620 ntAPPRIS ALT2 TSL 5 BASIC12.73□□□□□ -0.37
NcanP55066 Pcdha4-202ENSMUST00000192512 5363 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
NcanP55066 Tmem30b-201ENSMUST00000042975 2991 ntAPPRIS P1 BASIC12.73□□□□□ -0.37
NcanP55066 Zscan10-202ENSMUST00000115509 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
NcanP55066 Rnps1-201ENSMUST00000088512 1798 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
NcanP55066 Gm44065-201ENSMUST00000203184 3527 ntBASIC12.73□□□□□ -0.37
NcanP55066 Slc10a3-204ENSMUST00000114147 1708 ntAPPRIS ALT2 TSL 5 BASIC12.73□□□□□ -0.37
NcanP55066 Oxr1-204ENSMUST00000110297 4596 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
NcanP55066 Micalcl-201ENSMUST00000033033 2259 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
NcanP55066 Synm-204ENSMUST00000208231 4457 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
NcanP55066 Rad54l2-201ENSMUST00000046502 9305 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
NcanP55066 Nectin4-202ENSMUST00000094325 3245 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
NcanP55066 Zfp369-203ENSMUST00000130799 1580 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
NcanP55066 Las1l-202ENSMUST00000113864 2581 ntAPPRIS ALT2 TSL 5 BASIC12.73□□□□□ -0.37
NcanP55066 Moxd1-201ENSMUST00000095784 3090 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
NcanP55066 Col5a3-201ENSMUST00000004201 6119 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
NcanP55066 Cflar-204ENSMUST00000114309 2010 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
NcanP55066 Pla2g6-206ENSMUST00000173163 3018 ntTSL 5 BASIC12.72□□□□□ -0.37
NcanP55066 Slc1a2-203ENSMUST00000111212 1957 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
NcanP55066 Aptx-202ENSMUST00000068125 5383 ntAPPRIS P4 TSL 1 (best) BASIC12.72□□□□□ -0.37
NcanP55066 Tgif2-202ENSMUST00000081335 2900 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
NcanP55066 Dnaaf2-201ENSMUST00000021356 3390 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
NcanP55066 Pax6-201ENSMUST00000090391 2869 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 42.7 ms