Protein–RNA interactions for Protein: P54823

Ddx6, Probable ATP-dependent RNA helicase DDX6, mousemouse

Known RBP Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx6P54823 Gorab-201ENSMUST00000045138 2538 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Ddx6P54823 Hpse2-201ENSMUST00000099428 1779 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Ddx6P54823 Mcm8-201ENSMUST00000028831 3179 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Ddx6P54823 Gm43417-201ENSMUST00000201586 5207 ntBASIC12.34□□□□□ -0.43
Ddx6P54823 Tsc22d4-204ENSMUST00000110983 1043 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Ddx6P54823 Gm15207-201ENSMUST00000119259 442 ntBASIC12.34□□□□□ -0.43
Ddx6P54823 Rdh9-203ENSMUST00000136223 1276 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Ddx6P54823 Gm3948-201ENSMUST00000147795 421 ntTSL 3 BASIC12.34□□□□□ -0.43
Ddx6P54823 Hspb9-202ENSMUST00000169833 726 ntAPPRIS P2 BASIC12.34□□□□□ -0.43
Ddx6P54823 Gm8888-201ENSMUST00000177677 381 ntAPPRIS P1 BASIC12.34□□□□□ -0.43
Ddx6P54823 Dusp13-211ENSMUST00000183943 779 ntAPPRIS ALT2 TSL 5 BASIC12.34□□□□□ -0.43
Ddx6P54823 Mir6546-201ENSMUST00000184460 62 ntBASIC12.34□□□□□ -0.43
Ddx6P54823 Gm4131-201ENSMUST00000186010 1264 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
Ddx6P54823 Stpg4-202ENSMUST00000186211 591 ntAPPRIS ALT2 TSL 2 BASIC12.34□□□□□ -0.43
Ddx6P54823 4933408A14Rik-201ENSMUST00000199037 729 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Ddx6P54823 Isg20-206ENSMUST00000205981 834 ntTSL 3 BASIC12.34□□□□□ -0.43
Ddx6P54823 Pdzd9-203ENSMUST00000208635 1238 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Ddx6P54823 Lgals4-207ENSMUST00000208971 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Ddx6P54823 Gm45550-201ENSMUST00000209380 946 ntBASIC12.34□□□□□ -0.43
Ddx6P54823 AC122876.1-201ENSMUST00000217619 825 ntBASIC12.34□□□□□ -0.43
Ddx6P54823 AC135469.1-201ENSMUST00000225984 772 ntBASIC12.34□□□□□ -0.43
Ddx6P54823 AC159103.1-201ENSMUST00000228325 429 ntBASIC12.34□□□□□ -0.43
Ddx6P54823 Cd320-202ENSMUST00000087559 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Ddx6P54823 Lyz1-201ENSMUST00000092162 1263 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Ddx6P54823 Dhx37-201ENSMUST00000169485 4760 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Ddx6P54823 Zscan29-205ENSMUST00000163766 3611 ntAPPRIS ALT2 TSL 5 BASIC12.34□□□□□ -0.43
Ddx6P54823 Gm29771-201ENSMUST00000193142 1423 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Ddx6P54823 Taf6-203ENSMUST00000110937 2093 ntTSL 5 BASIC12.34□□□□□ -0.43
Ddx6P54823 Fgfr1-203ENSMUST00000119398 3789 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Ddx6P54823 Slc7a3-201ENSMUST00000073927 2232 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Ddx6P54823 Nacc1-201ENSMUST00000001975 4300 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Ddx6P54823 Fam71f1-201ENSMUST00000090487 1584 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Ddx6P54823 Ptpn1-201ENSMUST00000029053 4213 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Ddx6P54823 Tubb4b-ps2-201ENSMUST00000187481 1337 ntBASIC12.34□□□□□ -0.43
Ddx6P54823 Sacs-202ENSMUST00000119509 3468 ntAPPRIS ALT2 TSL 5 BASIC12.34□□□□□ -0.43
Ddx6P54823 Gm44999-201ENSMUST00000207456 1493 ntBASIC12.34□□□□□ -0.43
Ddx6P54823 Rtbdn-204ENSMUST00000152378 2322 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Ddx6P54823 Dnmbp-202ENSMUST00000212032 5074 ntAPPRIS ALT2 TSL 5 BASIC12.33□□□□□ -0.44
Ddx6P54823 Tnk2os-201ENSMUST00000141256 1392 ntTSL 2 BASIC12.33□□□□□ -0.44
Ddx6P54823 Rnf113a2-201ENSMUST00000183146 1383 ntAPPRIS P1 BASIC12.33□□□□□ -0.44
Ddx6P54823 Mul1-201ENSMUST00000044058 3733 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Ddx6P54823 Ddx46-202ENSMUST00000172272 5676 ntAPPRIS P2 TSL 5 BASIC12.33□□□□□ -0.44
Ddx6P54823 Ddx46-201ENSMUST00000099479 5664 ntAPPRIS ALT2 TSL 5 BASIC12.33□□□□□ -0.44
Ddx6P54823 Gm43447-201ENSMUST00000198471 1535 ntBASIC12.33□□□□□ -0.44
Ddx6P54823 Col26a1-202ENSMUST00000111103 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Ddx6P54823 Slc9b1-201ENSMUST00000078568 2248 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Ddx6P54823 Ppp2r5c-201ENSMUST00000084985 1847 ntAPPRIS P1 TSL 2 BASIC12.33□□□□□ -0.44
Ddx6P54823 Nbeal2-211ENSMUST00000196488 8599 ntAPPRIS ALT2 TSL 5 BASIC12.33□□□□□ -0.44
Ddx6P54823 Wdfy2-201ENSMUST00000014691 6646 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Ddx6P54823 Atp6v1b1-201ENSMUST00000006431 1999 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Ddx6P54823 Rpl11-201ENSMUST00000102536 833 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Ddx6P54823 Mup-ps26-201ENSMUST00000121751 202 ntBASIC12.33□□□□□ -0.44
Ddx6P54823 Gm16036-201ENSMUST00000150385 1112 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Ddx6P54823 Gm11706-201ENSMUST00000151282 316 ntTSL 5 BASIC12.33□□□□□ -0.44
Ddx6P54823 Gm13523-201ENSMUST00000151820 488 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Ddx6P54823 Taf9-201ENSMUST00000167256 1230 ntAPPRIS P1 TSL 2 BASIC12.33□□□□□ -0.44
Ddx6P54823 Gm17231-203ENSMUST00000170133 637 ntTSL 3 BASIC12.33□□□□□ -0.44
Ddx6P54823 5430405H02Rik-202ENSMUST00000176134 1196 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Ddx6P54823 3110080O07Rik-201ENSMUST00000193469 1021 ntBASIC12.33□□□□□ -0.44
Ddx6P54823 Gm38139-201ENSMUST00000195806 704 ntTSL 2 BASIC12.33□□□□□ -0.44
Ddx6P54823 Gm44126-201ENSMUST00000204831 514 ntBASIC12.33□□□□□ -0.44
Ddx6P54823 Gm17831-201ENSMUST00000205579 900 ntBASIC12.33□□□□□ -0.44
Ddx6P54823 Pgam2-201ENSMUST00000020768 840 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Ddx6P54823 Gm45781-201ENSMUST00000212860 539 ntTSL 5 BASIC12.33□□□□□ -0.44
Ddx6P54823 Gm7395-201ENSMUST00000216059 1045 ntBASIC12.33□□□□□ -0.44
Ddx6P54823 Gm33979-201ENSMUST00000219486 691 ntTSL 5 BASIC12.33□□□□□ -0.44
Ddx6P54823 CT009713.8-202ENSMUST00000224732 385 ntBASIC12.33□□□□□ -0.44
Ddx6P54823 Fam151b-201ENSMUST00000040106 1152 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Ddx6P54823 Gm9774-201ENSMUST00000047300 1064 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Ddx6P54823 Tas2r126-201ENSMUST00000059534 930 ntAPPRIS P1 BASIC12.33□□□□□ -0.44
Ddx6P54823 Gm9785-201ENSMUST00000062642 1006 ntBASIC12.33□□□□□ -0.44
Ddx6P54823 Gm5537-201ENSMUST00000091117 1252 ntBASIC12.33□□□□□ -0.44
Ddx6P54823 Zyg11a-203ENSMUST00000223127 2283 ntAPPRIS ALT2 TSL 5 BASIC12.33□□□□□ -0.44
Ddx6P54823 Acat2-201ENSMUST00000007005 2250 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Ddx6P54823 Slc14a2-202ENSMUST00000163367 1428 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Ddx6P54823 Naaa-201ENSMUST00000113102 2414 ntAPPRIS P3 TSL 1 (best) BASIC12.33□□□□□ -0.44
Ddx6P54823 6230400D17Rik-201ENSMUST00000180987 1554 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Ddx6P54823 Plcb1-202ENSMUST00000110116 7003 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Ddx6P54823 Ctnnb1-214ENSMUST00000178812 2702 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Ddx6P54823 BC027072-201ENSMUST00000057405 5004 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Ddx6P54823 Lsm11-202ENSMUST00000129820 6453 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Ddx6P54823 Twnk-201ENSMUST00000026227 3488 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Ddx6P54823 Dusp6-201ENSMUST00000020118 2796 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Ddx6P54823 N4bp2l1-201ENSMUST00000016279 1905 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Ddx6P54823 Rnf10-202ENSMUST00000112096 3112 ntAPPRIS P3 TSL 1 (best) BASIC12.33□□□□□ -0.44
Ddx6P54823 Zfp219-202ENSMUST00000166169 3017 ntAPPRIS P2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Ddx6P54823 Ssr1-203ENSMUST00000225246 1825 ntBASIC12.32□□□□□ -0.44
Ddx6P54823 Git1-201ENSMUST00000037285 3512 ntAPPRIS P2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Ddx6P54823 Bcl2l13-201ENSMUST00000009256 6925 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Ddx6P54823 Rapgef6-202ENSMUST00000101206 5864 ntAPPRIS ALT2 TSL 5 BASIC12.32□□□□□ -0.44
Ddx6P54823 Proser3-202ENSMUST00000108165 2466 ntAPPRIS P2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Ddx6P54823 Chrnb2-201ENSMUST00000029562 6399 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Ddx6P54823 Rftn2-202ENSMUST00000114428 2012 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Ddx6P54823 Sypl-201ENSMUST00000020885 2019 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Ddx6P54823 Slc6a9-210ENSMUST00000169885 1876 ntTSL 5 BASIC12.32□□□□□ -0.44
Ddx6P54823 Gbf1-201ENSMUST00000026254 6450 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Ddx6P54823 Nr2c2-202ENSMUST00000113463 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Ddx6P54823 Ash2l-210ENSMUST00000166078 2234 ntAPPRIS ALT2 TSL 5 BASIC12.32□□□□□ -0.44
Ddx6P54823 Cd300ld2-202ENSMUST00000106578 918 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
Ddx6P54823 Snx29-202ENSMUST00000115814 1125 ntTSL 5 BASIC12.32□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 51.6 ms