Protein–RNA interactions for Protein: P54729

Nub1, NEDD8 ultimate buster 1, mousemouse

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nub1P54729 Misp-202ENSMUST00000169041 2497 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Nub1P54729 Pspc1-201ENSMUST00000022507 4114 ntAPPRIS P2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Nub1P54729 C130026I21Rik-202ENSMUST00000093506 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Nub1P54729 Sesn2-201ENSMUST00000030724 3475 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Nub1P54729 4921507P07Rik-201ENSMUST00000031852 2378 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Nub1P54729 Gm24830-201ENSMUST00000102024 166 ntBASIC13.12□□□□□ -0.31
Nub1P54729 Gm14381-201ENSMUST00000122105 414 ntBASIC13.12□□□□□ -0.31
Nub1P54729 Gm13061-201ENSMUST00000137962 664 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Nub1P54729 Asb17os-201ENSMUST00000156292 496 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Nub1P54729 1810008B01Rik-201ENSMUST00000162325 829 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Nub1P54729 Gm26740-201ENSMUST00000180456 358 ntTSL 3 BASIC13.12□□□□□ -0.31
Nub1P54729 Mir6420-201ENSMUST00000185032 102 ntBASIC13.12□□□□□ -0.31
Nub1P54729 2610016A17Rik-202ENSMUST00000186768 689 ntBASIC13.12□□□□□ -0.31
Nub1P54729 Gm8885-201ENSMUST00000189382 598 ntBASIC13.12□□□□□ -0.31
Nub1P54729 Snhg8-203ENSMUST00000199645 528 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Nub1P54729 Gm38979-201ENSMUST00000207099 698 ntTSL 3 BASIC13.12□□□□□ -0.31
Nub1P54729 1700011B04Rik-203ENSMUST00000220654 1033 ntTSL 5 BASIC13.12□□□□□ -0.31
Nub1P54729 1700011B04Rik-209ENSMUST00000221760 779 ntTSL 5 BASIC13.12□□□□□ -0.31
Nub1P54729 AC166344.1-202ENSMUST00000224139 234 ntBASIC13.12□□□□□ -0.31
Nub1P54729 1110017D15Rik-201ENSMUST00000030152 1114 ntAPPRIS P1 TSL 5 BASIC13.12□□□□□ -0.31
Nub1P54729 Gm26232-201ENSMUST00000083360 166 ntBASIC13.12□□□□□ -0.31
Nub1P54729 Rnu1b6-201ENSMUST00000083839 166 ntBASIC13.12□□□□□ -0.31
Nub1P54729 Gtf2ird1-202ENSMUST00000074114 3330 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Nub1P54729 Wfdc8-201ENSMUST00000094351 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Nub1P54729 Ttll12-201ENSMUST00000016901 3220 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Nub1P54729 Ercc2-201ENSMUST00000062831 3578 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Nub1P54729 Coq3-201ENSMUST00000029909 2651 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Nub1P54729 Rnf223-201ENSMUST00000209248 2908 ntAPPRIS P1 BASIC13.12□□□□□ -0.31
Nub1P54729 Patj-201ENSMUST00000030290 2495 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Nub1P54729 H2-Ob-204ENSMUST00000173764 1319 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Nub1P54729 Styxl1-208ENSMUST00000178515 1651 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Nub1P54729 Oprm1-205ENSMUST00000078634 1695 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Nub1P54729 Ttpa-203ENSMUST00000121491 2862 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Nub1P54729 Zeb2-212ENSMUST00000176438 9124 ntAPPRIS P2 TSL 5 BASIC13.11□□□□□ -0.31
Nub1P54729 Adcyap1-201ENSMUST00000064775 2088 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Nub1P54729 Anks1b-221ENSMUST00000182786 3042 ntTSL 5 BASIC13.11□□□□□ -0.31
Nub1P54729 Smarca1-205ENSMUST00000141084 1965 ntTSL 2 BASIC13.11□□□□□ -0.31
Nub1P54729 Ripk3-202ENSMUST00000168716 1964 ntTSL 5 BASIC13.11□□□□□ -0.31
Nub1P54729 Ap1g2-211ENSMUST00000170285 2596 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
Nub1P54729 Sorbs3-202ENSMUST00000227259 2481 ntAPPRIS ALT2 BASIC13.11□□□□□ -0.31
Nub1P54729 Kpna1-201ENSMUST00000004054 5039 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Nub1P54729 Ighv1-80-201ENSMUST00000103547 351 ntAPPRIS P1 BASIC13.11□□□□□ -0.31
Nub1P54729 Vps25-204ENSMUST00000107280 876 ntTSL 2 BASIC13.11□□□□□ -0.31
Nub1P54729 Gm11595-201ENSMUST00000107440 1200 ntAPPRIS P1 BASIC13.11□□□□□ -0.31
Nub1P54729 Ufc1-202ENSMUST00000111302 914 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Nub1P54729 Gm14716-201ENSMUST00000120138 718 ntBASIC13.11□□□□□ -0.31
Nub1P54729 Pdlim2-205ENSMUST00000129174 729 ntTSL 2 BASIC13.11□□□□□ -0.31
Nub1P54729 Gm12984-201ENSMUST00000145711 273 ntTSL 5 BASIC13.11□□□□□ -0.31
Nub1P54729 Pdxk-ps-202ENSMUST00000160550 876 ntBASIC13.11□□□□□ -0.31
Nub1P54729 Prc1-211ENSMUST00000174199 2128 ntTSL 5 BASIC13.11□□□□□ -0.31
Nub1P54729 Il21r-202ENSMUST00000206103 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Nub1P54729 Gm39929-201ENSMUST00000209672 693 ntTSL 3 BASIC13.11□□□□□ -0.31
Nub1P54729 AC125206.1-201ENSMUST00000214070 739 ntTSL 5 BASIC13.11□□□□□ -0.31
Nub1P54729 Fam241b-201ENSMUST00000027719 771 ntTSL 3 BASIC13.11□□□□□ -0.31
Nub1P54729 Taf1d-201ENSMUST00000034415 1148 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
Nub1P54729 Prss34-201ENSMUST00000037453 1216 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Nub1P54729 Isoc2b-201ENSMUST00000064547 1080 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Nub1P54729 Gm9996-201ENSMUST00000070359 913 ntBASIC13.11□□□□□ -0.31
Nub1P54729 Gm10312-201ENSMUST00000078515 489 ntBASIC13.11□□□□□ -0.31
Nub1P54729 Opcml-201ENSMUST00000073822 2378 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
Nub1P54729 Epha5-202ENSMUST00000113398 4830 ntTSL 5 BASIC13.11□□□□□ -0.31
Nub1P54729 Slc2a4-203ENSMUST00000141837 1776 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Nub1P54729 Armcx3-202ENSMUST00000086880 2024 ntAPPRIS P1 TSL 2 BASIC13.11□□□□□ -0.31
Nub1P54729 Fam227a-204ENSMUST00000187519 2283 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Nub1P54729 Il33-202ENSMUST00000120388 2537 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Nub1P54729 Plg-201ENSMUST00000014578 2755 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Nub1P54729 Ptger4-201ENSMUST00000047379 3264 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
Nub1P54729 D330041H03Rik-205ENSMUST00000181014 1903 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Nub1P54729 Kdm2b-202ENSMUST00000046073 5180 ntAPPRIS P2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Nub1P54729 Tspan32-201ENSMUST00000009396 1582 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Nub1P54729 Arhgap27-204ENSMUST00000107024 3976 ntAPPRIS ALT2 TSL 5 BASIC13.11□□□□□ -0.31
Nub1P54729 Ddx55-202ENSMUST00000111438 2737 ntTSL 2 BASIC13.11□□□□□ -0.31
Nub1P54729 Trim61-201ENSMUST00000078409 1977 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Nub1P54729 Hdac5-201ENSMUST00000008999 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Nub1P54729 Tcf4-254ENSMUST00000202674 2615 ntTSL 5 BASIC13.1□□□□□ -0.31
Nub1P54729 Spata18-203ENSMUST00000113548 1623 ntAPPRIS ALT2 TSL 5 BASIC13.1□□□□□ -0.31
Nub1P54729 Hao1-201ENSMUST00000028704 2045 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Nub1P54729 Plcg1-202ENSMUST00000103115 4435 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Nub1P54729 Tyk2-206ENSMUST00000216874 4828 ntAPPRIS P2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Nub1P54729 Lrriq1-203ENSMUST00000166240 5232 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
Nub1P54729 Usp3-211ENSMUST00000174387 1901 ntTSL 5 BASIC13.1□□□□□ -0.31
Nub1P54729 Arl13b-201ENSMUST00000089289 3528 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
Nub1P54729 Cr1l-201ENSMUST00000075451 1651 ntAPPRIS P2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Nub1P54729 Baiap3-202ENSMUST00000182056 4645 ntAPPRIS P2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Nub1P54729 Tnnt3-217ENSMUST00000105957 1028 ntAPPRIS ALT2 TSL 5 BASIC13.1□□□□□ -0.31
Nub1P54729 Rab11fip4os2-201ENSMUST00000123067 689 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Nub1P54729 Gm45692-201ENSMUST00000131138 557 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
Nub1P54729 Gm29054-201ENSMUST00000187589 1185 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Nub1P54729 Gm12057-202ENSMUST00000189990 882 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
Nub1P54729 S100a3-204ENSMUST00000200290 509 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Nub1P54729 Gm39185-201ENSMUST00000212941 540 ntTSL 5 BASIC13.1□□□□□ -0.31
Nub1P54729 Gm19994-201ENSMUST00000217086 586 ntBASIC13.1□□□□□ -0.31
Nub1P54729 Hspb2-202ENSMUST00000217159 552 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Nub1P54729 AC163667.3-201ENSMUST00000225774 222 ntBASIC13.1□□□□□ -0.31
Nub1P54729 Ctrb1-201ENSMUST00000034435 878 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Nub1P54729 Ctrc-201ENSMUST00000037059 951 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
Nub1P54729 Ppp1r2-ps3-201ENSMUST00000078012 627 ntBASIC13.1□□□□□ -0.31
Nub1P54729 Accsl-201ENSMUST00000099690 2224 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Nub1P54729 Magee1-201ENSMUST00000033578 3550 ntAPPRIS P1 BASIC13.1□□□□□ -0.31
Nub1P54729 Gm15326-202ENSMUST00000128198 1422 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 40.5 ms