Protein–RNA interactions for Protein: P53783

Sox1, Transcription factor SOX-1, mousemouse

Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox1P53783 Pik3cd-201ENSMUST00000038859 4905 ntAPPRIS ALT1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Sox1P53783 0610009O20Rik-201ENSMUST00000025314 2404 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Sox1P53783 Lrrfip2-213ENSMUST00000216430 1525 ntTSL 5 BASIC12.41□□□□□ -0.42
Sox1P53783 AC107763.1-201ENSMUST00000226082 1365 ntBASIC12.41□□□□□ -0.42
Sox1P53783 Olfr683-202ENSMUST00000209879 3841 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
Sox1P53783 Rasal3-201ENSMUST00000063824 3681 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
Sox1P53783 Arhgef1-203ENSMUST00000117419 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Sox1P53783 Brinp1-201ENSMUST00000030036 3212 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Sox1P53783 Srsf10-204ENSMUST00000105853 3058 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
Sox1P53783 Gm28496-202ENSMUST00000137742 2752 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Sox1P53783 Slc6a7-201ENSMUST00000025520 3342 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Sox1P53783 Ngef-201ENSMUST00000027477 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Sox1P53783 Pfkfb3-203ENSMUST00000100411 2008 ntTSL 5 BASIC12.4□□□□□ -0.42
Sox1P53783 Gm4782-201ENSMUST00000168705 2046 ntBASIC12.4□□□□□ -0.42
Sox1P53783 Gm19461-205ENSMUST00000191207 2566 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Sox1P53783 Slc4a1ap-201ENSMUST00000114533 2424 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.42
Sox1P53783 Gm2721-201ENSMUST00000222380 1571 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Sox1P53783 Npnt-203ENSMUST00000093971 1830 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Sox1P53783 Glis3-202ENSMUST00000112612 3016 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Sox1P53783 Gm15703-201ENSMUST00000120250 880 ntBASIC12.4□□□□□ -0.42
Sox1P53783 Gm14993-201ENSMUST00000121180 164 ntBASIC12.4□□□□□ -0.42
Sox1P53783 Gm13445-201ENSMUST00000121664 307 ntBASIC12.4□□□□□ -0.42
Sox1P53783 Mia-202ENSMUST00000121848 572 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Sox1P53783 Gm12666-201ENSMUST00000123179 764 ntAPPRIS P1 TSL 5 BASIC12.4□□□□□ -0.42
Sox1P53783 Gm11884-201ENSMUST00000131639 641 ntTSL 5 BASIC12.4□□□□□ -0.42
Sox1P53783 Gm15985-201ENSMUST00000137731 343 ntTSL 3 BASIC12.4□□□□□ -0.42
Sox1P53783 Gm11379-201ENSMUST00000154678 381 ntTSL 3 BASIC12.4□□□□□ -0.42
Sox1P53783 Gm25226-201ENSMUST00000158198 123 ntBASIC12.4□□□□□ -0.42
Sox1P53783 Ccndbp1-208ENSMUST00000171260 1187 ntAPPRIS ALT2 TSL 5 BASIC12.4□□□□□ -0.42
Sox1P53783 Gm9022-201ENSMUST00000182482 992 ntBASIC12.4□□□□□ -0.42
Sox1P53783 1700017M07Rik-201ENSMUST00000198307 940 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Sox1P53783 Fxyd4-203ENSMUST00000203082 815 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Sox1P53783 Gm44506-201ENSMUST00000206278 965 ntBASIC12.4□□□□□ -0.42
Sox1P53783 Gm7082-201ENSMUST00000209880 969 ntBASIC12.4□□□□□ -0.42
Sox1P53783 Tcf25-210ENSMUST00000212880 827 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Sox1P53783 Gm6991-201ENSMUST00000218475 1178 ntBASIC12.4□□□□□ -0.42
Sox1P53783 Prr13-201ENSMUST00000023810 1224 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Sox1P53783 Rad23b-201ENSMUST00000030134 3810 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Sox1P53783 Fam212a-201ENSMUST00000048568 1025 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Sox1P53783 Gm5705-201ENSMUST00000066241 711 ntBASIC12.4□□□□□ -0.42
Sox1P53783 Prok2-201ENSMUST00000008273 594 ntTSL 3 BASIC12.4□□□□□ -0.42
Sox1P53783 Olfr372-201ENSMUST00000093434 1016 ntAPPRIS P1 BASIC12.4□□□□□ -0.42
Sox1P53783 Gm42769-201ENSMUST00000198576 1659 ntBASIC12.4□□□□□ -0.42
Sox1P53783 Tub-202ENSMUST00000119474 2097 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Sox1P53783 C030005K06Rik-201ENSMUST00000129164 2076 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Sox1P53783 BB123696-201ENSMUST00000222580 2056 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Sox1P53783 Sema6c-201ENSMUST00000090821 3933 ntAPPRIS P3 TSL 5 BASIC12.4□□□□□ -0.42
Sox1P53783 Gm21964-203ENSMUST00000219454 1513 ntAPPRIS P5 TSL 5 BASIC12.4□□□□□ -0.42
Sox1P53783 Ptbp2-201ENSMUST00000029780 3364 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.42
Sox1P53783 Il34-204ENSMUST00000150680 1796 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Sox1P53783 Gm43267-201ENSMUST00000199664 1796 ntBASIC12.4□□□□□ -0.42
Sox1P53783 Akr1b8-201ENSMUST00000038406 1358 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Sox1P53783 Kcnk13-202ENSMUST00000160413 3061 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Sox1P53783 Kcnk13-204ENSMUST00000177549 3075 ntAPPRIS P1 TSL 5 BASIC12.4□□□□□ -0.42
Sox1P53783 Parp3-202ENSMUST00000112479 2030 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Sox1P53783 Umad1-204ENSMUST00000159433 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Sox1P53783 Nup205-204ENSMUST00000201374 6411 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Sox1P53783 9330162012Rik-201ENSMUST00000154919 3836 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Sox1P53783 Rgp1-202ENSMUST00000107886 5888 ntAPPRIS P1 TSL 5 BASIC12.4□□□□□ -0.42
Sox1P53783 Klhdc3-201ENSMUST00000071841 2123 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.43
Sox1P53783 Cxcr5-201ENSMUST00000062215 2614 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.43
Sox1P53783 Lmo7-201ENSMUST00000100337 6092 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.43
Sox1P53783 Gm12626-201ENSMUST00000117339 1983 ntBASIC12.39□□□□□ -0.43
Sox1P53783 Rubcn-204ENSMUST00000119810 3371 ntAPPRIS ALT2 TSL 5 BASIC12.39□□□□□ -0.43
Sox1P53783 Stt3b-201ENSMUST00000035010 4221 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Sox1P53783 Rims1-205ENSMUST00000097811 6446 ntAPPRIS P5 TSL 5 BASIC12.39□□□□□ -0.43
Sox1P53783 Ednrb-203ENSMUST00000227824 2669 ntAPPRIS P1 BASIC12.39□□□□□ -0.43
Sox1P53783 Csk-209ENSMUST00000217314 2162 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Sox1P53783 Fopnl-202ENSMUST00000120707 1414 ntAPPRIS ALT2 TSL 5 BASIC12.39□□□□□ -0.43
Sox1P53783 Tia1-211ENSMUST00000130967 1445 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Sox1P53783 Gm13556-201ENSMUST00000132692 1412 ntTSL 3 BASIC12.39□□□□□ -0.43
Sox1P53783 Zfp365-201ENSMUST00000064656 4259 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Sox1P53783 Trabd2b-201ENSMUST00000094894 6617 ntAPPRIS P1 TSL 5 BASIC12.39□□□□□ -0.43
Sox1P53783 Hspa4-201ENSMUST00000020630 4618 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Sox1P53783 Phactr3-201ENSMUST00000103065 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Sox1P53783 Amotl2-201ENSMUST00000035121 4328 ntAPPRIS P2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Sox1P53783 Tmem91-203ENSMUST00000108405 550 ntTSL 3 BASIC12.39□□□□□ -0.43
Sox1P53783 1700021J08Rik-201ENSMUST00000138729 575 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Sox1P53783 Gm16305-201ENSMUST00000140747 556 ntBASIC12.39□□□□□ -0.43
Sox1P53783 Gm22379-201ENSMUST00000157480 131 ntBASIC12.39□□□□□ -0.43
Sox1P53783 Prdx2-208ENSMUST00000164807 1175 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Sox1P53783 Trub2-210ENSMUST00000177467 744 ntTSL 3 BASIC12.39□□□□□ -0.43
Sox1P53783 Gm5335-201ENSMUST00000182995 1000 ntBASIC12.39□□□□□ -0.43
Sox1P53783 Gm37197-201ENSMUST00000195607 401 ntBASIC12.39□□□□□ -0.43
Sox1P53783 C230057A21Rik-202ENSMUST00000195781 600 ntTSL 3 BASIC12.39□□□□□ -0.43
Sox1P53783 Gm42816-201ENSMUST00000198433 325 ntBASIC12.39□□□□□ -0.43
Sox1P53783 Mitd1-201ENSMUST00000027257 1231 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Sox1P53783 Dnajb1-201ENSMUST00000005620 2996 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Sox1P53783 Rpl3-201ENSMUST00000081650 1293 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Sox1P53783 Gm43570-201ENSMUST00000199951 3688 ntBASIC12.39□□□□□ -0.43
Sox1P53783 Kctd20-202ENSMUST00000117672 2219 ntTSL 5 BASIC12.39□□□□□ -0.43
Sox1P53783 Gm2155-201ENSMUST00000181581 1974 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Sox1P53783 Epb41l5-208ENSMUST00000191046 6870 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Sox1P53783 Ism2-201ENSMUST00000051601 1350 ntTSL 5 BASIC12.39□□□□□ -0.43
Sox1P53783 Rnf4-204ENSMUST00000182047 2944 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Sox1P53783 Dnm1-203ENSMUST00000113350 3258 ntAPPRIS ALT1 TSL 5 BASIC12.39□□□□□ -0.43
Sox1P53783 Gm18798-201ENSMUST00000187264 1700 ntBASIC12.39□□□□□ -0.43
Sox1P53783 Gprc5a-201ENSMUST00000050104 2083 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Sox1P53783 Rgs6-209ENSMUST00000186848 1472 ntTSL 5 BASIC12.39□□□□□ -0.43
Sox1P53783 Mmgt2-203ENSMUST00000129162 1828 ntAPPRIS P1 TSL 5 BASIC12.39□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 41.3 ms