Protein–RNA interactions for Protein: P51448

Rora, Nuclear receptor ROR-alpha, mousemouse

Predictions only

Length 523 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RoraP51448 Dock11-201ENSMUST00000033419 6665 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
RoraP51448 Ggt6-201ENSMUST00000076443 1818 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
RoraP51448 Ddr1-204ENSMUST00000119825 3769 ntAPPRIS P3 TSL 1 (best) BASIC11.55□□□□□ -0.56
RoraP51448 AC079680.2-201ENSMUST00000219181 1306 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
RoraP51448 Tjp3-205ENSMUST00000219479 2901 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
RoraP51448 Qrfp-201ENSMUST00000057407 2927 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
RoraP51448 Gabpb1-206ENSMUST00000110425 4153 ntAPPRIS ALT1 TSL 1 (best) BASIC11.55□□□□□ -0.56
RoraP51448 Smad4-202ENSMUST00000114939 2233 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
RoraP51448 Fastkd3-201ENSMUST00000051784 2421 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
RoraP51448 Slc44a4-201ENSMUST00000007249 2261 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
RoraP51448 Acp5-203ENSMUST00000165735 1376 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
RoraP51448 Gba-202ENSMUST00000167998 1938 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
RoraP51448 Hexim2-201ENSMUST00000062530 1910 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
RoraP51448 Rnf4-201ENSMUST00000030992 2895 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
RoraP51448 Lrfn3-201ENSMUST00000046351 2886 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
RoraP51448 Samd5-201ENSMUST00000100070 6818 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
RoraP51448 Tns2-202ENSMUST00000169627 4707 ntAPPRIS P2 TSL 1 (best) BASIC11.54□□□□□ -0.56
RoraP51448 Ttc17-202ENSMUST00000094801 3408 ntTSL 5 BASIC11.54□□□□□ -0.56
RoraP51448 Ighv8-9-201ENSMUST00000103533 301 ntAPPRIS P1 BASIC11.54□□□□□ -0.56
RoraP51448 Ighv8-13-201ENSMUST00000103542 303 ntAPPRIS ALT2 BASIC11.54□□□□□ -0.56
RoraP51448 Il15ra-204ENSMUST00000114832 468 ntTSL 5 BASIC11.54□□□□□ -0.56
RoraP51448 Rpsa-ps12-201ENSMUST00000120596 892 ntBASIC11.54□□□□□ -0.56
RoraP51448 Olfr647-ps1-201ENSMUST00000121599 960 ntBASIC11.54□□□□□ -0.56
RoraP51448 Gm12130-201ENSMUST00000133599 639 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
RoraP51448 Gm5616-201ENSMUST00000165252 384 ntBASIC11.54□□□□□ -0.56
RoraP51448 Tmem40-205ENSMUST00000166254 811 ntAPPRIS P3 TSL 5 BASIC11.54□□□□□ -0.56
RoraP51448 Gm17040-202ENSMUST00000170597 889 ntBASIC11.54□□□□□ -0.56
RoraP51448 Gm8741-201ENSMUST00000174736 384 ntBASIC11.54□□□□□ -0.56
RoraP51448 Gm29615-201ENSMUST00000185371 697 ntBASIC11.54□□□□□ -0.56
RoraP51448 Gm28224-201ENSMUST00000186078 697 ntBASIC11.54□□□□□ -0.56
RoraP51448 Gm29001-201ENSMUST00000186177 697 ntBASIC11.54□□□□□ -0.56
RoraP51448 Gm28292-201ENSMUST00000186593 697 ntBASIC11.54□□□□□ -0.56
RoraP51448 Gm28101-201ENSMUST00000187608 697 ntBASIC11.54□□□□□ -0.56
RoraP51448 Gm29076-201ENSMUST00000187689 697 ntBASIC11.54□□□□□ -0.56
RoraP51448 Gm28302-201ENSMUST00000187931 697 ntBASIC11.54□□□□□ -0.56
RoraP51448 Gm28646-201ENSMUST00000188220 697 ntBASIC11.54□□□□□ -0.56
RoraP51448 Gm28205-201ENSMUST00000189177 697 ntBASIC11.54□□□□□ -0.56
RoraP51448 Gm29032-201ENSMUST00000189797 697 ntBASIC11.54□□□□□ -0.56
RoraP51448 Gm28695-201ENSMUST00000190300 697 ntBASIC11.54□□□□□ -0.56
RoraP51448 Gm37448-201ENSMUST00000192795 697 ntBASIC11.54□□□□□ -0.56
RoraP51448 AY036118-201ENSMUST00000200021 923 ntBASIC11.54□□□□□ -0.56
RoraP51448 Trappc4-206ENSMUST00000217163 1185 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
RoraP51448 Gm18730-201ENSMUST00000218038 343 ntBASIC11.54□□□□□ -0.56
RoraP51448 AC147241.1-201ENSMUST00000222173 785 ntTSL 3 BASIC11.54□□□□□ -0.56
RoraP51448 Psma7-201ENSMUST00000029082 914 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
RoraP51448 Ppie-201ENSMUST00000030404 1188 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
RoraP51448 Izumo1-201ENSMUST00000033100 1493 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
RoraP51448 Lnx1-201ENSMUST00000039744 2727 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
RoraP51448 Gm13187-202ENSMUST00000133873 1321 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
RoraP51448 F630040K05Rik-202ENSMUST00000180558 2633 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
RoraP51448 Lnx1-209ENSMUST00000153543 2208 ntTSL 5 BASIC11.54□□□□□ -0.56
RoraP51448 Bcl2l2-201ENSMUST00000022806 3509 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
RoraP51448 Amz2-203ENSMUST00000103061 1832 ntAPPRIS P2 TSL 1 (best) BASIC11.53□□□□□ -0.56
RoraP51448 Kifc1-201ENSMUST00000114361 2260 ntAPPRIS ALT2 TSL 5 BASIC11.53□□□□□ -0.56
RoraP51448 Usp53-202ENSMUST00000197314 3586 ntTSL 5 BASIC11.53□□□□□ -0.56
RoraP51448 9130019O22Rik-202ENSMUST00000164345 2735 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
RoraP51448 Itfg2-201ENSMUST00000001559 2320 ntAPPRIS P2 TSL 1 (best) BASIC11.53□□□□□ -0.56
RoraP51448 Trpm1-219ENSMUST00000206314 2323 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
RoraP51448 Glo1-201ENSMUST00000024823 1935 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
RoraP51448 Cdk15-201ENSMUST00000114248 1477 ntAPPRIS P2 TSL 1 (best) BASIC11.53□□□□□ -0.56
RoraP51448 Gm37660-201ENSMUST00000192754 1732 ntBASIC11.53□□□□□ -0.56
RoraP51448 Sipa1l3-207ENSMUST00000182484 2420 ntTSL 5 BASIC11.53□□□□□ -0.56
RoraP51448 Rpl28-ps3-201ENSMUST00000116058 393 ntBASIC11.53□□□□□ -0.56
RoraP51448 Gm12690-201ENSMUST00000132108 354 ntTSL 3 BASIC11.53□□□□□ -0.56
RoraP51448 Abhd14a-203ENSMUST00000171925 1122 ntTSL 3 BASIC11.53□□□□□ -0.56
RoraP51448 Eloc-207ENSMUST00000187910 620 ntTSL 2 BASIC11.53□□□□□ -0.56
RoraP51448 Ip6k2-202ENSMUST00000192028 1199 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
RoraP51448 Gm3786-201ENSMUST00000202659 378 ntBASIC11.53□□□□□ -0.56
RoraP51448 Rpl17-ps3-201ENSMUST00000221295 556 ntBASIC11.53□□□□□ -0.56
RoraP51448 Ppp1r2-ps3-201ENSMUST00000078012 627 ntBASIC11.53□□□□□ -0.56
RoraP51448 Myo9b-202ENSMUST00000168839 7102 ntAPPRIS ALT2 TSL 5 BASIC11.53□□□□□ -0.56
RoraP51448 Dnaja2-201ENSMUST00000034138 2919 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
RoraP51448 Cyp4f16-208ENSMUST00000169591 2242 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
RoraP51448 Cacna2d1-203ENSMUST00000101581 3879 ntAPPRIS P2 TSL 1 (best) BASIC11.53□□□□□ -0.56
RoraP51448 Cacna2d1-206ENSMUST00000180204 3882 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
RoraP51448 Tktl2-201ENSMUST00000002025 2021 ntAPPRIS P1 BASIC11.53□□□□□ -0.56
RoraP51448 Ffar1-201ENSMUST00000052700 4175 ntAPPRIS P1 BASIC11.53□□□□□ -0.56
RoraP51448 Sgf29-201ENSMUST00000032956 1312 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
RoraP51448 Tbc1d1-204ENSMUST00000121370 5419 ntAPPRIS P3 TSL 1 (best) BASIC11.53□□□□□ -0.56
RoraP51448 Adrb3-201ENSMUST00000081438 2795 ntAPPRIS P2 TSL 1 (best) BASIC11.53□□□□□ -0.56
RoraP51448 Sh3bp5l-202ENSMUST00000116376 3016 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
RoraP51448 Tmem63b-201ENSMUST00000113523 3284 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
RoraP51448 Slc25a36-202ENSMUST00000085206 5227 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
RoraP51448 Myo18a-210ENSMUST00000130305 5450 ntAPPRIS ALT2 TSL 5 BASIC11.53□□□□□ -0.56
RoraP51448 Dennd4c-202ENSMUST00000082026 7940 ntAPPRIS ALT2 TSL 5 BASIC11.53□□□□□ -0.56
RoraP51448 Gm44942-201ENSMUST00000096093 2072 ntBASIC11.53□□□□□ -0.56
RoraP51448 Trmt1-203ENSMUST00000109767 2138 ntAPPRIS P3 TSL 1 (best) BASIC11.53□□□□□ -0.56
RoraP51448 Txndc12-201ENSMUST00000030296 1359 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
RoraP51448 Mtm1-203ENSMUST00000061970 3379 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
RoraP51448 Trim23-201ENSMUST00000022225 3416 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
RoraP51448 Zfp1-203ENSMUST00000212072 1930 ntTSL 1 (best) BASIC11.52□□□□□ -0.56
RoraP51448 Acvr1c-201ENSMUST00000028178 9162 ntAPPRIS P2 TSL 1 (best) BASIC11.52□□□□□ -0.56
RoraP51448 Cd72-204ENSMUST00000107925 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC11.52□□□□□ -0.56
RoraP51448 Slc25a45-206ENSMUST00000155697 1960 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
RoraP51448 Ptp4a3-202ENSMUST00000163582 3808 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
RoraP51448 Ppm1l-201ENSMUST00000029355 9417 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
RoraP51448 Tbkbp1-204ENSMUST00000107615 3333 ntAPPRIS P2 TSL 5 BASIC11.52□□□□□ -0.56
RoraP51448 Msh4-201ENSMUST00000005630 3325 ntAPPRIS P3 TSL 1 (best) BASIC11.52□□□□□ -0.56
RoraP51448 Calm1-202ENSMUST00000110082 4115 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
RoraP51448 Lmbr1-201ENSMUST00000055195 4926 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
Retrieved 100 of 76,532 protein–RNA pairs in 53.1 ms