Protein–RNA interactions for Protein: P48379

Rfx2, DNA-binding protein RFX2, mousemouse

Predictions only

Length 717 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx2P48379 Ank3-234ENSMUST00000182993 1233 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Rfx2P48379 Gm27390-201ENSMUST00000184516 176 ntBASIC12.76□□□□□ -0.37
Rfx2P48379 Gm9230-201ENSMUST00000188228 532 ntBASIC12.76□□□□□ -0.37
Rfx2P48379 Gm28172-201ENSMUST00000189880 506 ntTSL 3 BASIC12.76□□□□□ -0.37
Rfx2P48379 Gm8913-201ENSMUST00000209491 641 ntBASIC12.76□□□□□ -0.37
Rfx2P48379 Tpd52l1-203ENSMUST00000213639 827 ntAPPRIS ALT2 TSL 2 BASIC12.76□□□□□ -0.37
Rfx2P48379 Abhd14b-210ENSMUST00000217496 631 ntTSL 5 BASIC12.76□□□□□ -0.37
Rfx2P48379 Gm32141-201ENSMUST00000220189 488 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Rfx2P48379 Fam241b-201ENSMUST00000027719 771 ntTSL 3 BASIC12.76□□□□□ -0.37
Rfx2P48379 1700028J19Rik-201ENSMUST00000037220 1245 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Rfx2P48379 Phpt1-201ENSMUST00000039156 937 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Rfx2P48379 Olfr686-201ENSMUST00000050157 1018 ntAPPRIS P1 BASIC12.76□□□□□ -0.37
Rfx2P48379 Olfr450-201ENSMUST00000067503 933 ntAPPRIS P1 BASIC12.76□□□□□ -0.37
Rfx2P48379 Olfr605-201ENSMUST00000080660 1011 ntAPPRIS P1 BASIC12.76□□□□□ -0.37
Rfx2P48379 Gm26905-201ENSMUST00000180798 6621 ntTSL 5 BASIC12.76□□□□□ -0.37
Rfx2P48379 Hsd3b3-203ENSMUST00000107018 1443 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Rfx2P48379 Tas1r1-201ENSMUST00000030792 2863 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Rfx2P48379 Gm20721-201ENSMUST00000168292 1484 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
Rfx2P48379 Mapk8-204ENSMUST00000111944 1528 ntAPPRIS ALT1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Rfx2P48379 Pax6-203ENSMUST00000111082 3116 ntAPPRIS ALT1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Rfx2P48379 Ttc33-203ENSMUST00000118193 1671 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Rfx2P48379 Trp63-204ENSMUST00000115305 1729 ntAPPRIS ALT1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Rfx2P48379 Ppp3cb-202ENSMUST00000159027 3831 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
Rfx2P48379 D330041H03Rik-205ENSMUST00000181014 1903 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Rfx2P48379 Zcchc18-202ENSMUST00000101227 2045 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Rfx2P48379 Rgs11-202ENSMUST00000122058 2005 ntAPPRIS ALT2 TSL 2 BASIC12.76□□□□□ -0.37
Rfx2P48379 Csrnp2-201ENSMUST00000061457 4126 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Rfx2P48379 Kctd18-210ENSMUST00000164963 2114 ntTSL 5 BASIC12.76□□□□□ -0.37
Rfx2P48379 Hnrnpf-201ENSMUST00000035493 2147 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Rfx2P48379 Clcnkb-201ENSMUST00000006378 2370 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Rfx2P48379 Maats1-201ENSMUST00000023501 2750 ntAPPRIS P2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Rfx2P48379 Traf3ip2-201ENSMUST00000019987 2867 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Rfx2P48379 Srr-203ENSMUST00000108448 3239 ntAPPRIS P1 TSL 5 BASIC12.75□□□□□ -0.37
Rfx2P48379 Ttc17-202ENSMUST00000094801 3408 ntTSL 5 BASIC12.75□□□□□ -0.37
Rfx2P48379 Kmt5b-207ENSMUST00000113974 4150 ntAPPRIS P3 TSL 5 BASIC12.75□□□□□ -0.37
Rfx2P48379 Ankrd17-201ENSMUST00000014421 10458 ntAPPRIS P4 TSL 5 BASIC12.75□□□□□ -0.37
Rfx2P48379 Agxt2-204ENSMUST00000110542 2198 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Rfx2P48379 Gm14644-201ENSMUST00000116671 647 ntBASIC12.75□□□□□ -0.37
Rfx2P48379 Gm14208-201ENSMUST00000119645 678 ntBASIC12.75□□□□□ -0.37
Rfx2P48379 Gm13394-201ENSMUST00000121658 1000 ntBASIC12.75□□□□□ -0.37
Rfx2P48379 1810063I02Rik-201ENSMUST00000130205 274 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Rfx2P48379 Gm13115-201ENSMUST00000156438 620 ntTSL 5 BASIC12.75□□□□□ -0.37
Rfx2P48379 Gm28287-201ENSMUST00000186612 546 ntTSL 5 BASIC12.75□□□□□ -0.37
Rfx2P48379 Gm28450-201ENSMUST00000187349 638 ntBASIC12.75□□□□□ -0.37
Rfx2P48379 Gm17767-201ENSMUST00000189410 1470 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Rfx2P48379 Pex1-208ENSMUST00000195894 528 ntTSL 3 BASIC12.75□□□□□ -0.37
Rfx2P48379 Gm19385-201ENSMUST00000214714 1813 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Rfx2P48379 Mpzl2-205ENSMUST00000217097 1175 ntTSL 5 BASIC12.75□□□□□ -0.37
Rfx2P48379 Gm18636-201ENSMUST00000218846 1066 ntBASIC12.75□□□□□ -0.37
Rfx2P48379 Retreg1-206ENSMUST00000228306 1430 ntBASIC12.75□□□□□ -0.37
Rfx2P48379 Car6-201ENSMUST00000030817 1567 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Rfx2P48379 Tm2d3-201ENSMUST00000032726 908 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Rfx2P48379 Sidt1-201ENSMUST00000047446 4279 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Rfx2P48379 Kcnk7-201ENSMUST00000052448 1226 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Rfx2P48379 Plcxd3-201ENSMUST00000061925 1851 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Rfx2P48379 Rpl10a-ps2-201ENSMUST00000071184 642 ntBASIC12.75□□□□□ -0.37
Rfx2P48379 Gm26035-201ENSMUST00000083065 308 ntBASIC12.75□□□□□ -0.37
Rfx2P48379 Gm17080-201ENSMUST00000087588 811 ntTSL 5 BASIC12.75□□□□□ -0.37
Rfx2P48379 Gm6994-201ENSMUST00000088880 1163 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Rfx2P48379 Cramp1l-201ENSMUST00000073337 7517 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Rfx2P48379 Il7-205ENSMUST00000194279 4858 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Rfx2P48379 Cacna1c-227ENSMUST00000220022 7765 ntTSL 5 BASIC12.75□□□□□ -0.37
Rfx2P48379 Myo7a-203ENSMUST00000107127 6806 ntAPPRIS P3 TSL 5 BASIC12.75□□□□□ -0.37
Rfx2P48379 Nxph1-202ENSMUST00000160300 2815 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Rfx2P48379 Prkag2-202ENSMUST00000076306 2838 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Rfx2P48379 Ap1g2-201ENSMUST00000036041 2673 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Rfx2P48379 Galnt11-202ENSMUST00000114950 2493 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Rfx2P48379 Rtbdn-204ENSMUST00000152378 2322 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Rfx2P48379 Prkce-202ENSMUST00000097275 6254 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Rfx2P48379 Zeb2-211ENSMUST00000153561 2070 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Rfx2P48379 Rtbdn-201ENSMUST00000067472 1908 ntAPPRIS P2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Rfx2P48379 Ripk3-201ENSMUST00000022830 1892 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Rfx2P48379 Pcdh8-204ENSMUST00000195355 3704 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Rfx2P48379 Ercc2-202ENSMUST00000108460 3485 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Rfx2P48379 Git2-202ENSMUST00000086564 2984 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
Rfx2P48379 Chrna3-201ENSMUST00000034851 4358 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Rfx2P48379 Gm16168-201ENSMUST00000161091 1359 ntTSL 3 BASIC12.74□□□□□ -0.37
Rfx2P48379 Ccr6-203ENSMUST00000166348 1310 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Rfx2P48379 Tnfrsf13b-201ENSMUST00000010286 2556 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Rfx2P48379 Ighv5-4-201ENSMUST00000103444 425 ntAPPRIS P1 BASIC12.74□□□□□ -0.37
Rfx2P48379 Gm14597-202ENSMUST00000129769 715 ntAPPRIS P5 TSL 3 BASIC12.74□□□□□ -0.37
Rfx2P48379 9430021M05Rik-201ENSMUST00000145985 1201 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Rfx2P48379 4732440D04Rik-202ENSMUST00000159618 413 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Rfx2P48379 Ino80dos-202ENSMUST00000186436 652 ntTSL 5 BASIC12.74□□□□□ -0.37
Rfx2P48379 Gm18304-201ENSMUST00000189162 546 ntBASIC12.74□□□□□ -0.37
Rfx2P48379 Gm17812-201ENSMUST00000204935 318 ntBASIC12.74□□□□□ -0.37
Rfx2P48379 Gm18730-201ENSMUST00000218038 343 ntBASIC12.74□□□□□ -0.37
Rfx2P48379 AC025913.2-202ENSMUST00000219248 605 ntTSL 5 BASIC12.74□□□□□ -0.37
Rfx2P48379 Calca-201ENSMUST00000032906 994 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Rfx2P48379 L1td1-204ENSMUST00000173659 2547 ntAPPRIS ALT2 TSL 2 BASIC12.74□□□□□ -0.37
Rfx2P48379 Dab2ip-204ENSMUST00000112983 6051 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Rfx2P48379 Lipe-201ENSMUST00000003207 3613 ntAPPRIS P4 TSL 1 (best) BASIC12.74□□□□□ -0.37
Rfx2P48379 Rapgef3-204ENSMUST00000128775 3586 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Rfx2P48379 Ppm1g-201ENSMUST00000031032 2307 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Rfx2P48379 Tkfc-201ENSMUST00000037678 2253 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Rfx2P48379 Ccdc170-201ENSMUST00000019901 2151 ntAPPRIS P2 TSL 5 BASIC12.74□□□□□ -0.37
Rfx2P48379 Tmem178b-201ENSMUST00000061740 3178 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Rfx2P48379 Prkcsh-202ENSMUST00000115331 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Rfx2P48379 Nrf1-207ENSMUST00000115206 1879 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Rfx2P48379 Nrg1-206ENSMUST00000208205 2645 ntAPPRIS ALT2 TSL 5 BASIC12.74□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 28.9 ms