Protein–RNA interactions for Protein: P42859

Htt, Huntingtin, mousemouse

Predictions only

Length 3,119 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HttP42859 Defb29-201ENSMUST00000060598 462 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
HttP42859 Ints5-201ENSMUST00000096249 3294 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
HttP42859 AC241621.2-201ENSMUST00000223991 2151 ntBASIC12.52□□□□□ -0.41
HttP42859 Gm9415-201ENSMUST00000200462 1321 ntBASIC12.52□□□□□ -0.41
HttP42859 Fam161a-203ENSMUST00000109557 1947 ntAPPRIS P1 TSL 2 BASIC12.52□□□□□ -0.41
HttP42859 Gm595-201ENSMUST00000114928 2122 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
HttP42859 Zscan22-201ENSMUST00000055528 2620 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
HttP42859 Usp33-209ENSMUST00000197748 4183 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.41
HttP42859 Usp33-202ENSMUST00000117492 3886 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
HttP42859 Olfr1156-203ENSMUST00000216726 3271 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.41
HttP42859 Mdm2-202ENSMUST00000105263 3145 ntTSL 5 BASIC12.52□□□□□ -0.41
HttP42859 Atmin-201ENSMUST00000109099 4877 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
HttP42859 Gm11473-201ENSMUST00000118980 359 ntBASIC12.52□□□□□ -0.41
HttP42859 Gm13802-201ENSMUST00000150159 663 ntTSL 3 BASIC12.52□□□□□ -0.41
HttP42859 Gm28415-201ENSMUST00000187528 452 ntTSL 2 BASIC12.52□□□□□ -0.41
HttP42859 2410002F23Rik-220ENSMUST00000191537 872 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.41
HttP42859 Pex1-208ENSMUST00000195894 528 ntTSL 3 BASIC12.52□□□□□ -0.41
HttP42859 Gm44323-201ENSMUST00000198689 129 ntBASIC12.52□□□□□ -0.41
HttP42859 AC122840.4-201ENSMUST00000221310 1285 ntTSL 5 BASIC12.52□□□□□ -0.41
HttP42859 Cib4-201ENSMUST00000065486 769 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
HttP42859 Hax1-201ENSMUST00000079724 1139 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.41
HttP42859 Mir341-201ENSMUST00000093593 96 ntBASIC12.52□□□□□ -0.41
HttP42859 Nox3-201ENSMUST00000115800 1792 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
HttP42859 Srrm3-204ENSMUST00000144211 3932 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
HttP42859 Rbm14-201ENSMUST00000006625 3165 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
HttP42859 Immt-203ENSMUST00000114151 2518 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
HttP42859 Bpgm-201ENSMUST00000045372 2220 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
HttP42859 Fam198a-204ENSMUST00000215990 2149 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
HttP42859 Gtpbp1-201ENSMUST00000046463 3398 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
HttP42859 Mfsd1-201ENSMUST00000029344 3011 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
HttP42859 Nptxr-201ENSMUST00000023057 5004 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
HttP42859 Bloc1s1-205ENSMUST00000153731 613 ntTSL 5 BASIC12.51□□□□□ -0.41
HttP42859 Gm2464-201ENSMUST00000180838 2551 ntTSL 5 BASIC12.51□□□□□ -0.41
HttP42859 Gm11413-201ENSMUST00000155822 1461 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
HttP42859 Gm5939-201ENSMUST00000119613 2874 ntBASIC12.51□□□□□ -0.41
HttP42859 Gab1-201ENSMUST00000034150 4870 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
HttP42859 Pigb-202ENSMUST00000098566 2193 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
HttP42859 Mrap2-203ENSMUST00000179313 2039 ntAPPRIS P1 TSL 2 BASIC12.51□□□□□ -0.41
HttP42859 Gm13608-201ENSMUST00000121807 1406 ntBASIC12.51□□□□□ -0.41
HttP42859 Lrfn3-201ENSMUST00000046351 2886 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
HttP42859 Cyp4f40-201ENSMUST00000165061 1858 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
HttP42859 Gstm4-203ENSMUST00000178808 1462 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
HttP42859 Capns1-202ENSMUST00000108196 1192 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
HttP42859 Chordc1-202ENSMUST00000213605 519 ntTSL 2 BASIC12.51□□□□□ -0.41
HttP42859 AC134601.2-201ENSMUST00000221071 130 ntBASIC12.51□□□□□ -0.41
HttP42859 Gm45124-201ENSMUST00000206723 2755 ntBASIC12.51□□□□□ -0.41
HttP42859 E2f2-201ENSMUST00000061721 4739 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
HttP42859 Cars-201ENSMUST00000010899 3222 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
HttP42859 Scp2-201ENSMUST00000030340 2640 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
HttP42859 Pik3r1-201ENSMUST00000035532 2923 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
HttP42859 Xpc-201ENSMUST00000032182 3634 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
HttP42859 Gm9754-201ENSMUST00000031305 3004 ntTSL 2 BASIC12.51□□□□□ -0.41
HttP42859 Tal1-201ENSMUST00000030489 4213 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
HttP42859 Zc2hc1a-203ENSMUST00000193010 1420 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
HttP42859 Clcn4-203ENSMUST00000210061 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
HttP42859 Ermard-203ENSMUST00000097393 2535 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
HttP42859 Tnnt3-213ENSMUST00000105952 1040 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
HttP42859 Tnnt3-215ENSMUST00000105954 1052 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
HttP42859 Tnnt3-216ENSMUST00000105955 1028 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
HttP42859 Tnnt3-218ENSMUST00000105958 1050 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
HttP42859 Fam107b-202ENSMUST00000115052 861 ntTSL 3 BASIC12.51□□□□□ -0.41
HttP42859 Gm15197-201ENSMUST00000120526 478 ntBASIC12.51□□□□□ -0.41
HttP42859 2810433D01Rik-202ENSMUST00000154798 1045 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
HttP42859 Gm17221-201ENSMUST00000163909 481 ntBASIC12.51□□□□□ -0.41
HttP42859 Gm17073-201ENSMUST00000168069 556 ntBASIC12.51□□□□□ -0.41
HttP42859 Tnnt3-225ENSMUST00000179658 1079 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
HttP42859 Gm7833-201ENSMUST00000183288 990 ntBASIC12.51□□□□□ -0.41
HttP42859 Gm27440-201ENSMUST00000184785 107 ntBASIC12.51□□□□□ -0.41
HttP42859 Gm20781-201ENSMUST00000193154 693 ntBASIC12.51□□□□□ -0.41
HttP42859 Gm21736-201ENSMUST00000195399 693 ntBASIC12.51□□□□□ -0.41
HttP42859 Gm5982-201ENSMUST00000196234 512 ntBASIC12.51□□□□□ -0.41
HttP42859 Gm8268-201ENSMUST00000209683 458 ntBASIC12.51□□□□□ -0.41
HttP42859 Gm18124-201ENSMUST00000210695 706 ntBASIC12.51□□□□□ -0.41
HttP42859 Fam228a-203ENSMUST00000220978 861 ntAPPRIS ALT2 TSL 5 BASIC12.51□□□□□ -0.41
HttP42859 Tnnt3-202ENSMUST00000078497 1067 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
HttP42859 Nuak2-202ENSMUST00000082125 3107 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
HttP42859 1700036A12Rik-202ENSMUST00000190053 1828 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
HttP42859 Ankrd34c-202ENSMUST00000185470 2475 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
HttP42859 Ntm-203ENSMUST00000115237 2039 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
HttP42859 Chd1-205ENSMUST00000173311 4211 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
HttP42859 Zfp212-201ENSMUST00000009411 2801 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
HttP42859 Tmem164-202ENSMUST00000101198 4443 ntTSL 3 BASIC12.5□□□□□ -0.41
HttP42859 Sema3b-205ENSMUST00000102532 3191 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
HttP42859 Bcl2l11-204ENSMUST00000103211 672 ntAPPRIS ALT2 TSL 2 BASIC12.5□□□□□ -0.41
HttP42859 Gm15373-201ENSMUST00000121495 214 ntBASIC12.5□□□□□ -0.41
HttP42859 Gm16441-201ENSMUST00000138176 924 ntBASIC12.5□□□□□ -0.41
HttP42859 Gm16080-201ENSMUST00000152128 692 ntTSL 3 BASIC12.5□□□□□ -0.41
HttP42859 Mir6387-201ENSMUST00000184042 108 ntBASIC12.5□□□□□ -0.41
HttP42859 Gm4903-201ENSMUST00000210462 405 ntBASIC12.5□□□□□ -0.41
HttP42859 Gm19046-201ENSMUST00000221263 1298 ntBASIC12.5□□□□□ -0.41
HttP42859 B230303A05Rik-204ENSMUST00000223006 748 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
HttP42859 AC107711.4-201ENSMUST00000228948 440 ntBASIC12.5□□□□□ -0.41
HttP42859 Nnmt-201ENSMUST00000034808 1043 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
HttP42859 Wdfy3-206ENSMUST00000174698 3858 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
HttP42859 Lrrc32-203ENSMUST00000205956 4576 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
HttP42859 Asgr1-202ENSMUST00000092959 1308 ntAPPRIS P3 TSL 2 BASIC12.5□□□□□ -0.41
HttP42859 Lmntd1-201ENSMUST00000111706 2350 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
HttP42859 Gart-201ENSMUST00000023684 3518 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
HttP42859 Ncmap-201ENSMUST00000064481 1448 ntAPPRIS P1 TSL 3 BASIC12.5□□□□□ -0.41
HttP42859 Ino80-202ENSMUST00000110808 3928 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 54.4 ms