Protein–RNA interactions for Protein: P39749

Fen1, Flap endonuclease 1, mousemouse

Predictions only

Length 378 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Fen1P39749 Gm5863-201ENSMUST00000121760 1008 ntBASIC12.24□□□□□ -0.45
Fen1P39749 Slc2a9-207ENSMUST00000143758 1296 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Fen1P39749 1110018N20Rik-202ENSMUST00000147446 1162 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Fen1P39749 Rmrp-201ENSMUST00000157463 271 ntBASIC12.24□□□□□ -0.45
Fen1P39749 Kctd17-202ENSMUST00000159771 986 ntAPPRIS ALT2 TSL 2 BASIC12.24□□□□□ -0.45
Fen1P39749 Gm16296-201ENSMUST00000159905 325 ntBASIC12.24□□□□□ -0.45
Fen1P39749 Slc37a1-202ENSMUST00000171233 2929 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Fen1P39749 Olfr455-201ENSMUST00000171307 954 ntAPPRIS P1 BASIC12.24□□□□□ -0.45
Fen1P39749 1700092C10Rik-201ENSMUST00000172547 585 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Fen1P39749 Pfdn6-205ENSMUST00000174426 396 ntTSL 2 BASIC12.24□□□□□ -0.45
Fen1P39749 Zfp518b-203ENSMUST00000179555 6816 ntAPPRIS P1 TSL 2 BASIC12.24□□□□□ -0.45
Fen1P39749 Krtap16-3-201ENSMUST00000179707 601 ntAPPRIS P1 BASIC12.24□□□□□ -0.45
Fen1P39749 A330069E16Rik-201ENSMUST00000181191 887 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Fen1P39749 Tnip1-201ENSMUST00000018482 2810 ntAPPRIS P3 TSL 1 (best) BASIC12.24□□□□□ -0.45
Fen1P39749 Gm27892-201ENSMUST00000185017 106 ntBASIC12.24□□□□□ -0.45
Fen1P39749 Gm29152-201ENSMUST00000189284 325 ntTSL 5 BASIC12.24□□□□□ -0.45
Fen1P39749 Gm37849-201ENSMUST00000194722 1881 ntBASIC12.24□□□□□ -0.45
Fen1P39749 Gm44775-201ENSMUST00000207266 1456 ntBASIC12.24□□□□□ -0.45
Fen1P39749 Gm5035-201ENSMUST00000215581 927 ntBASIC12.24□□□□□ -0.45
Fen1P39749 AC160405.1-201ENSMUST00000218207 1545 ntBASIC12.24□□□□□ -0.45
Fen1P39749 AL732506.1-201ENSMUST00000226420 281 ntBASIC12.24□□□□□ -0.45
Fen1P39749 Treml1-201ENSMUST00000024792 1235 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Fen1P39749 Pigc-201ENSMUST00000028021 2196 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Fen1P39749 Timm10-201ENSMUST00000028470 690 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Fen1P39749 Mdk-201ENSMUST00000028672 1054 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Fen1P39749 Dsc2-201ENSMUST00000039247 4630 ntAPPRIS P3 TSL 1 (best) BASIC12.24□□□□□ -0.45
Fen1P39749 Olfr983-201ENSMUST00000050996 1050 ntTSL 2 BASIC12.24□□□□□ -0.45
Fen1P39749 Coa4-201ENSMUST00000054310 1391 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Fen1P39749 Tmem107-201ENSMUST00000075980 779 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Fen1P39749 Olfr763-201ENSMUST00000077460 2523 ntAPPRIS P1 BASIC12.24□□□□□ -0.45
Fen1P39749 Prx-202ENSMUST00000098644 4841 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Fen1P39749 Camk1d-201ENSMUST00000044009 6962 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Fen1P39749 Zfp426-202ENSMUST00000115562 3557 ntAPPRIS P3 TSL 1 (best) BASIC12.24□□□□□ -0.45
Fen1P39749 Myo7a-201ENSMUST00000084979 6849 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Fen1P39749 Vps16-201ENSMUST00000028900 3161 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Fen1P39749 Plagl2-201ENSMUST00000056924 5485 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Fen1P39749 Lclat1-201ENSMUST00000067545 4467 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Fen1P39749 Ptgfr-201ENSMUST00000029670 6624 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Fen1P39749 Fuca2-201ENSMUST00000060212 2007 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Fen1P39749 Fam160b2-201ENSMUST00000022690 4033 ntAPPRIS P1 TSL 5 BASIC12.23□□□□□ -0.45
Fen1P39749 AC160410.1-201ENSMUST00000219298 1972 ntBASIC12.23□□□□□ -0.45
Fen1P39749 Mtf1-202ENSMUST00000106193 7554 ntAPPRIS P1 TSL 5 BASIC12.23□□□□□ -0.45
Fen1P39749 9330199G10Rik-202ENSMUST00000221607 1728 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Fen1P39749 Ttc33-203ENSMUST00000118193 1671 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Fen1P39749 Lsp1-201ENSMUST00000018963 1695 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Fen1P39749 1500009C09Rik-202ENSMUST00000143238 1552 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Fen1P39749 Nlrp6-203ENSMUST00000183845 4436 ntAPPRIS P2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Fen1P39749 Tiprl-201ENSMUST00000043235 4380 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Fen1P39749 Mtap-201ENSMUST00000058030 2797 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Fen1P39749 Dmp1-201ENSMUST00000066708 2764 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Fen1P39749 Mbtps2-203ENSMUST00000112522 3891 ntTSL 2 BASIC12.23□□□□□ -0.45
Fen1P39749 Mbtps2-208ENSMUST00000179062 3890 ntAPPRIS P1 TSL 2 BASIC12.23□□□□□ -0.45
Fen1P39749 Rhox2b-201ENSMUST00000115191 799 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Fen1P39749 Gm15703-201ENSMUST00000120250 880 ntBASIC12.23□□□□□ -0.45
Fen1P39749 Ankzf1-201ENSMUST00000127625 1167 ntTSL 5 BASIC12.23□□□□□ -0.45
Fen1P39749 6030498E09Rik-202ENSMUST00000168144 510 ntAPPRIS P1 TSL 5 BASIC12.23□□□□□ -0.45
Fen1P39749 Gm20652-201ENSMUST00000177314 383 ntTSL 2 BASIC12.23□□□□□ -0.45
Fen1P39749 Vmo1-201ENSMUST00000021179 672 ntAPPRIS P1 TSL 2 BASIC12.23□□□□□ -0.45
Fen1P39749 Gm17794-201ENSMUST00000220252 955 ntBASIC12.23□□□□□ -0.45
Fen1P39749 1700067P10Rik-201ENSMUST00000022028 794 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Fen1P39749 Mrps22-201ENSMUST00000035034 1197 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Fen1P39749 Lats2-202ENSMUST00000038381 933 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Fen1P39749 Otud6a-201ENSMUST00000060241 873 ntAPPRIS P1 BASIC12.23□□□□□ -0.45
Fen1P39749 Gm10146-201ENSMUST00000072739 309 ntBASIC12.23□□□□□ -0.45
Fen1P39749 Akr1b7-201ENSMUST00000007449 1281 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Fen1P39749 Rcor3-202ENSMUST00000110849 3791 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Fen1P39749 Nhlh2-201ENSMUST00000066187 3761 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Fen1P39749 Yeats2-202ENSMUST00000115560 6116 ntAPPRIS ALT2 TSL 5 BASIC12.23□□□□□ -0.45
Fen1P39749 Zc3h18-205ENSMUST00000176629 3672 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Fen1P39749 4931428F04Rik-202ENSMUST00000171788 3552 ntAPPRIS P1 TSL 5 BASIC12.23□□□□□ -0.45
Fen1P39749 Cic-212ENSMUST00000169266 8221 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Fen1P39749 Myo18a-222ENSMUST00000168348 6582 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Fen1P39749 Gm14137-201ENSMUST00000069711 3067 ntAPPRIS P1 BASIC12.23□□□□□ -0.45
Fen1P39749 Pars2-202ENSMUST00000106781 3046 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Fen1P39749 Cd40-201ENSMUST00000017799 2986 ntAPPRIS P4 TSL 1 (best) BASIC12.23□□□□□ -0.45
Fen1P39749 Tardbp-204ENSMUST00000105699 1904 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Fen1P39749 Pcdhga6-201ENSMUST00000195823 4733 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Fen1P39749 Ppp1r18-202ENSMUST00000122899 2743 ntAPPRIS P2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Fen1P39749 Gsdma-201ENSMUST00000017348 2726 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Fen1P39749 Umod-201ENSMUST00000033263 2625 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Fen1P39749 Csnk1g1-202ENSMUST00000117849 5173 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Fen1P39749 Serpinb13-201ENSMUST00000027564 1607 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Fen1P39749 Gm10110-202ENSMUST00000228705 3220 ntBASIC12.22□□□□□ -0.45
Fen1P39749 Coro6-205ENSMUST00000108391 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Fen1P39749 Rfx7-205ENSMUST00000184015 1554 ntTSL 5 BASIC12.22□□□□□ -0.45
Fen1P39749 Sdccag8-202ENSMUST00000056773 1551 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Fen1P39749 Rnaseh2a-210ENSMUST00000147812 1532 ntAPPRIS P1 TSL 5 BASIC12.22□□□□□ -0.45
Fen1P39749 Cd72-201ENSMUST00000030179 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Fen1P39749 Gm15897-201ENSMUST00000117770 1486 ntBASIC12.22□□□□□ -0.45
Fen1P39749 Rbms2-201ENSMUST00000092033 1481 ntAPPRIS P4 TSL 1 (best) BASIC12.22□□□□□ -0.45
Fen1P39749 Nubp2-201ENSMUST00000044252 1430 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Fen1P39749 Ccdc151-202ENSMUST00000115336 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Fen1P39749 Zfp608-201ENSMUST00000064763 6112 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Fen1P39749 Vps18-201ENSMUST00000037280 4054 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Fen1P39749 Ces1d-201ENSMUST00000034172 2004 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Fen1P39749 Gm10544-202ENSMUST00000181887 1923 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Fen1P39749 Prss45-201ENSMUST00000011391 1232 ntAPPRIS P2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Fen1P39749 Gm11425-201ENSMUST00000119608 498 ntBASIC12.22□□□□□ -0.45
Fen1P39749 Gm2231-201ENSMUST00000125661 612 ntBASIC12.22□□□□□ -0.45
Fen1P39749 Rpl12-203ENSMUST00000126610 1242 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 43.8 ms