Protein–RNA interactions for Protein: P39038

Cdh4, Cadherin-4, mousemouse

Predictions only

Length 913 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh4P39038 Prss43-201ENSMUST00000077549 2327 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Cdh4P39038 Gm19817-201ENSMUST00000199764 2132 ntBASIC11.66□□□□□ -0.54
Cdh4P39038 D230017M19Rik-201ENSMUST00000180722 3096 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Cdh4P39038 AC160405.1-201ENSMUST00000218207 1545 ntBASIC11.66□□□□□ -0.54
Cdh4P39038 Myo9b-202ENSMUST00000168839 7102 ntAPPRIS ALT2 TSL 5 BASIC11.66□□□□□ -0.54
Cdh4P39038 Adamts1-201ENSMUST00000023610 4884 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Cdh4P39038 Zfp61-208ENSMUST00000165241 1668 ntAPPRIS P1 TSL 5 BASIC11.66□□□□□ -0.54
Cdh4P39038 Upk3b-201ENSMUST00000062606 3530 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Cdh4P39038 Apol7c-201ENSMUST00000062562 2044 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Cdh4P39038 Capn11-201ENSMUST00000120717 2591 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Cdh4P39038 Sptbn2-201ENSMUST00000008991 8251 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Cdh4P39038 Ighv1-80-201ENSMUST00000103547 351 ntAPPRIS P1 BASIC11.66□□□□□ -0.54
Cdh4P39038 Mir877-201ENSMUST00000104738 85 ntBASIC11.66□□□□□ -0.54
Cdh4P39038 Gm11564-201ENSMUST00000105055 691 ntAPPRIS P1 BASIC11.66□□□□□ -0.54
Cdh4P39038 Ccdc28b-202ENSMUST00000106035 821 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Cdh4P39038 Tcf7l2-205ENSMUST00000111651 1127 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Cdh4P39038 Gm14644-201ENSMUST00000116671 647 ntBASIC11.66□□□□□ -0.54
Cdh4P39038 Gm13665-201ENSMUST00000120830 528 ntBASIC11.66□□□□□ -0.54
Cdh4P39038 Gm14597-202ENSMUST00000129769 715 ntAPPRIS P5 TSL 3 BASIC11.66□□□□□ -0.54
Cdh4P39038 G630018N14Rik-201ENSMUST00000135656 1231 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Cdh4P39038 Gm6963-201ENSMUST00000147879 379 ntBASIC11.66□□□□□ -0.54
Cdh4P39038 Dnajc25-204ENSMUST00000152199 1141 ntTSL 5 BASIC11.66□□□□□ -0.54
Cdh4P39038 C8g-201ENSMUST00000015227 822 ntAPPRIS ALT2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Cdh4P39038 Gm44124-201ENSMUST00000204159 472 ntBASIC11.66□□□□□ -0.54
Cdh4P39038 Mt2-202ENSMUST00000212806 388 ntTSL 2 BASIC11.66□□□□□ -0.54
Cdh4P39038 Trappc4-206ENSMUST00000217163 1185 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Cdh4P39038 Gm46400-201ENSMUST00000222294 724 ntTSL 5 BASIC11.66□□□□□ -0.54
Cdh4P39038 AC123665.1-201ENSMUST00000228204 438 ntBASIC11.66□□□□□ -0.54
Cdh4P39038 Taf1d-201ENSMUST00000034415 1148 ntAPPRIS P3 TSL 1 (best) BASIC11.66□□□□□ -0.54
Cdh4P39038 Olfr117-201ENSMUST00000073636 954 ntAPPRIS P1 BASIC11.66□□□□□ -0.54
Cdh4P39038 Klk1b27-201ENSMUST00000079859 889 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Cdh4P39038 Olfr130-201ENSMUST00000087129 954 ntAPPRIS P1 BASIC11.66□□□□□ -0.54
Cdh4P39038 Vmn1r197-201ENSMUST00000091734 897 ntAPPRIS P1 BASIC11.66□□□□□ -0.54
Cdh4P39038 Cacna1c-203ENSMUST00000112790 7631 ntAPPRIS ALT2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Cdh4P39038 Serpinb12-202ENSMUST00000112724 1623 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Cdh4P39038 Slc25a45-206ENSMUST00000155697 1960 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Cdh4P39038 Gm11696-203ENSMUST00000188296 1793 ntTSL 3 BASIC11.66□□□□□ -0.54
Cdh4P39038 Hmg20a-204ENSMUST00000214869 1782 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Cdh4P39038 Drd1-201ENSMUST00000021932 3526 ntAPPRIS P2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Cdh4P39038 Gm37437-201ENSMUST00000194451 1937 ntBASIC11.66□□□□□ -0.54
Cdh4P39038 Zfp957-202ENSMUST00000161649 2751 ntAPPRIS P1 TSL 5 BASIC11.66□□□□□ -0.54
Cdh4P39038 Cacna1c-227ENSMUST00000220022 7765 ntTSL 5 BASIC11.66□□□□□ -0.54
Cdh4P39038 4933440M02Rik-203ENSMUST00000206609 1747 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Cdh4P39038 Mafk-202ENSMUST00000110836 3097 ntAPPRIS P1 TSL 5 BASIC11.66□□□□□ -0.54
Cdh4P39038 Plcxd3-201ENSMUST00000061925 1851 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Cdh4P39038 Sfxn3-203ENSMUST00000111954 2867 ntTSL 5 BASIC11.65□□□□□ -0.54
Cdh4P39038 Lamb3-209ENSMUST00000194677 4867 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Cdh4P39038 H2-T10-202ENSMUST00000174382 1699 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Cdh4P39038 Crat-201ENSMUST00000028207 3833 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Cdh4P39038 Adra1a-206ENSMUST00000225182 2337 ntBASIC11.65□□□□□ -0.54
Cdh4P39038 Tmem19-206ENSMUST00000218731 1346 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Cdh4P39038 Epha5-206ENSMUST00000113406 4606 ntAPPRIS ALT2 TSL 5 BASIC11.65□□□□□ -0.54
Cdh4P39038 Kcnd1-201ENSMUST00000009875 5287 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Cdh4P39038 Pitpnb-204ENSMUST00000200298 2632 ntAPPRIS ALT1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Cdh4P39038 Espn-201ENSMUST00000030785 3406 ntAPPRIS P2 TSL 1 (best) BASIC11.65□□□□□ -0.54
Cdh4P39038 Fgf12-201ENSMUST00000100024 3065 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Cdh4P39038 Gcn1l1-201ENSMUST00000064454 8555 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Cdh4P39038 Pla2g3-202ENSMUST00000064265 2566 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Cdh4P39038 Gm23912-201ENSMUST00000104687 87 ntBASIC11.65□□□□□ -0.54
Cdh4P39038 Pax5-204ENSMUST00000107826 1228 ntTSL 5 BASIC11.65□□□□□ -0.54
Cdh4P39038 Clic3-202ENSMUST00000114265 808 ntAPPRIS P2 TSL 1 (best) BASIC11.65□□□□□ -0.54
Cdh4P39038 Gm12012-201ENSMUST00000118857 1066 ntBASIC11.65□□□□□ -0.54
Cdh4P39038 Gm12199-201ENSMUST00000137567 517 ntTSL 3 BASIC11.65□□□□□ -0.54
Cdh4P39038 Gm17105-201ENSMUST00000163715 652 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Cdh4P39038 Rprl1-202ENSMUST00000198476 238 ntBASIC11.65□□□□□ -0.54
Cdh4P39038 Gm19187-201ENSMUST00000206781 892 ntBASIC11.65□□□□□ -0.54
Cdh4P39038 AC125206.1-201ENSMUST00000214070 739 ntTSL 5 BASIC11.65□□□□□ -0.54
Cdh4P39038 AC158523.3-201ENSMUST00000220664 864 ntTSL 5 BASIC11.65□□□□□ -0.54
Cdh4P39038 AC154252.2-201ENSMUST00000223593 767 ntBASIC11.65□□□□□ -0.54
Cdh4P39038 CT009713.10-202ENSMUST00000225734 696 ntBASIC11.65□□□□□ -0.54
Cdh4P39038 Tmem50a-201ENSMUST00000030626 1204 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Cdh4P39038 Fam96a-201ENSMUST00000034945 1240 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Cdh4P39038 Mgme1-202ENSMUST00000110027 2359 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Cdh4P39038 Gm36445-201ENSMUST00000209344 1432 ntTSL 5 BASIC11.65□□□□□ -0.54
Cdh4P39038 Pmp2-201ENSMUST00000029034 1408 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Cdh4P39038 Ankrd33-201ENSMUST00000070875 1442 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Cdh4P39038 Tcf12-218ENSMUST00000184783 3489 ntAPPRIS P3 TSL 5 BASIC11.65□□□□□ -0.54
Cdh4P39038 Cyb5rl-203ENSMUST00000106758 2516 ntAPPRIS P1 TSL 5 BASIC11.65□□□□□ -0.54
Cdh4P39038 AC123857.2-201ENSMUST00000225756 1582 ntBASIC11.65□□□□□ -0.54
Cdh4P39038 Med25-211ENSMUST00000208551 2678 ntTSL 2 BASIC11.65□□□□□ -0.54
Cdh4P39038 Catsper4-201ENSMUST00000055892 1725 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Cdh4P39038 Gm37391-201ENSMUST00000194891 2318 ntBASIC11.65□□□□□ -0.54
Cdh4P39038 Fam214b-203ENSMUST00000107957 3234 ntAPPRIS P1 TSL 5 BASIC11.65□□□□□ -0.54
Cdh4P39038 A730020E08Rik-201ENSMUST00000180421 3387 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Cdh4P39038 Cnpy2-202ENSMUST00000219037 1383 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.55
Cdh4P39038 Amz2-203ENSMUST00000103061 1832 ntAPPRIS P2 TSL 1 (best) BASIC11.65□□□□□ -0.55
Cdh4P39038 Npnt-203ENSMUST00000093971 1830 ntAPPRIS ALT2 TSL 1 (best) BASIC11.65□□□□□ -0.55
Cdh4P39038 Gm16564-201ENSMUST00000162545 3010 ntTSL 1 (best) BASIC11.65□□□□□ -0.55
Cdh4P39038 Arhgef2-203ENSMUST00000170653 4238 ntAPPRIS ALT2 TSL 1 (best) BASIC11.65□□□□□ -0.55
Cdh4P39038 Cd109-201ENSMUST00000093812 5860 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.55
Cdh4P39038 Dcc-202ENSMUST00000114943 5219 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Cdh4P39038 Cdh7-202ENSMUST00000112701 4945 ntAPPRIS P1 TSL 5 BASIC11.64□□□□□ -0.55
Cdh4P39038 Me3-202ENSMUST00000032856 4485 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Cdh4P39038 G6pdx-201ENSMUST00000004327 2652 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Cdh4P39038 Ndel1-202ENSMUST00000101017 1646 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Cdh4P39038 Izumo1-201ENSMUST00000033100 1493 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Cdh4P39038 Cd79a-201ENSMUST00000003469 1457 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Cdh4P39038 Srr-203ENSMUST00000108448 3239 ntAPPRIS P1 TSL 5 BASIC11.64□□□□□ -0.55
Cdh4P39038 Heatr3-202ENSMUST00000121949 3086 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Cdh4P39038 Tfe3-204ENSMUST00000115677 2943 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Retrieved 100 of 76,532 protein–RNA pairs in 48.6 ms