Protein–RNA interactions for Protein: P35428

Hes1, Transcription factor HES-1, mousemouse

Predictions only

Length 282 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hes1P35428 Bin2-205ENSMUST00000182814 1901 ntTSL 5 BASIC10.07□□□□□ -0.8
Hes1P35428 Recql-201ENSMUST00000032370 2112 ntAPPRIS ALT2 TSL 1 (best) BASIC10.07□□□□□ -0.8
Hes1P35428 Prmt2-203ENSMUST00000099572 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC10.07□□□□□ -0.8
Hes1P35428 Hspa2-202ENSMUST00000219555 2526 ntAPPRIS P1 BASIC10.07□□□□□ -0.8
Hes1P35428 Gsn-205ENSMUST00000201185 2607 ntAPPRIS ALT2 TSL 1 (best) BASIC10.07□□□□□ -0.8
Hes1P35428 H3f3a-205ENSMUST00000161308 2841 ntAPPRIS P2 TSL 1 (best) BASIC10.07□□□□□ -0.8
Hes1P35428 Gm29100-201ENSMUST00000187564 4410 ntBASIC10.07□□□□□ -0.8
Hes1P35428 Plagl1-203ENSMUST00000121766 3897 ntAPPRIS ALT2 TSL 1 (best) BASIC10.07□□□□□ -0.8
Hes1P35428 Spop-202ENSMUST00000107724 2881 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Hes1P35428 Abca2-201ENSMUST00000102919 8033 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Hes1P35428 Arhgap25-202ENSMUST00000101197 2493 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
Hes1P35428 Acin1-208ENSMUST00000126166 2369 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
Hes1P35428 Phactr1-206ENSMUST00000131942 2056 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
Hes1P35428 Cdk7-201ENSMUST00000091299 1988 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Hes1P35428 Il2rg-201ENSMUST00000033664 1670 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Hes1P35428 D730001G18Rik-202ENSMUST00000191407 1494 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Hes1P35428 Chchd3-202ENSMUST00000115091 1363 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
Hes1P35428 Mfap3l-203ENSMUST00000161421 4142 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
Hes1P35428 Gm26799-201ENSMUST00000180959 1361 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
Hes1P35428 Tnfrsf18-202ENSMUST00000103173 1189 ntAPPRIS P4 TSL 1 (best) BASIC10.07□□□□□ -0.8
Hes1P35428 1700042G07Rik-201ENSMUST00000106492 385 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Hes1P35428 Rpl3-ps2-201ENSMUST00000117131 1214 ntBASIC10.07□□□□□ -0.8
Hes1P35428 Gm5940-201ENSMUST00000117582 1068 ntBASIC10.07□□□□□ -0.8
Hes1P35428 Gm13562-201ENSMUST00000125198 797 ntTSL 2 BASIC10.07□□□□□ -0.8
Hes1P35428 D630024D03Rik-201ENSMUST00000126265 720 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
Hes1P35428 Gm24548-201ENSMUST00000158650 108 ntBASIC10.07□□□□□ -0.8
Hes1P35428 Nudt17-202ENSMUST00000171249 1110 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Hes1P35428 Klk11-202ENSMUST00000171458 1260 ntAPPRIS P3 TSL 2 BASIC10.07□□□□□ -0.8
Hes1P35428 Pitx2-204ENSMUST00000172645 915 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
Hes1P35428 Gm8801-201ENSMUST00000173255 1064 ntBASIC10.07□□□□□ -0.8
Hes1P35428 Olfr1414-202ENSMUST00000189174 1159 ntAPPRIS P1 TSL 3 BASIC10.07□□□□□ -0.8
Hes1P35428 Gm5850-201ENSMUST00000192923 1206 ntBASIC10.07□□□□□ -0.8
Hes1P35428 Gm43755-201ENSMUST00000200001 408 ntTSL 5 BASIC10.07□□□□□ -0.8
Hes1P35428 Gm18935-201ENSMUST00000212692 664 ntBASIC10.07□□□□□ -0.8
Hes1P35428 Gm31992-201ENSMUST00000213387 862 ntTSL 5 BASIC10.07□□□□□ -0.8
Hes1P35428 Ppcdc-207ENSMUST00000214339 738 ntTSL 2 BASIC10.07□□□□□ -0.8
Hes1P35428 AC147241.1-201ENSMUST00000222173 785 ntTSL 3 BASIC10.07□□□□□ -0.8
Hes1P35428 Gm7399-201ENSMUST00000032395 858 ntBASIC10.07□□□□□ -0.8
Hes1P35428 Olfr569-201ENSMUST00000078191 945 ntAPPRIS P1 BASIC10.07□□□□□ -0.8
Hes1P35428 Taar7e-201ENSMUST00000092656 1077 ntAPPRIS P1 BASIC10.07□□□□□ -0.8
Hes1P35428 Olfr582-201ENSMUST00000098212 960 ntBASIC10.07□□□□□ -0.8
Hes1P35428 Sec14l1-202ENSMUST00000090433 4654 ntAPPRIS ALT2 TSL 1 (best) BASIC10.07□□□□□ -0.8
Hes1P35428 Lrp2-203ENSMUST00000100051 4359 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
Hes1P35428 Fam206a-201ENSMUST00000045368 4275 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Hes1P35428 Gm595-201ENSMUST00000114928 2122 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Hes1P35428 Rgs20-202ENSMUST00000118000 2125 ntAPPRIS ALT2 TSL 5 BASIC10.07□□□□□ -0.8
Hes1P35428 Farsb-202ENSMUST00000170217 2036 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Hes1P35428 Picalm-213ENSMUST00000208742 3361 ntAPPRIS ALT2 TSL 1 (best) BASIC10.07□□□□□ -0.8
Hes1P35428 Pcdhb14-201ENSMUST00000052387 8695 ntAPPRIS P1 BASIC10.07□□□□□ -0.8
Hes1P35428 Chrd-201ENSMUST00000007171 3275 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Hes1P35428 Gm10544-202ENSMUST00000181887 1923 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
Hes1P35428 Tcf4-234ENSMUST00000201410 1915 ntTSL 5 BASIC10.07□□□□□ -0.8
Hes1P35428 Tcf4-243ENSMUST00000202057 1941 ntTSL 5 BASIC10.07□□□□□ -0.8
Hes1P35428 Gm6210-201ENSMUST00000204734 1942 ntBASIC10.07□□□□□ -0.8
Hes1P35428 Hs6st2-201ENSMUST00000088172 4318 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
Hes1P35428 Mmgt2-203ENSMUST00000129162 1828 ntAPPRIS P1 TSL 5 BASIC10.07□□□□□ -0.8
Hes1P35428 Gm10097-201ENSMUST00000180100 2784 ntAPPRIS P1 BASIC10.07□□□□□ -0.8
Hes1P35428 Prrx1-201ENSMUST00000027878 4952 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Hes1P35428 Myh1-201ENSMUST00000018637 5938 ntAPPRIS P1 TSL 5 BASIC10.07□□□□□ -0.8
Hes1P35428 Gm12992-201ENSMUST00000124738 4493 ntTSL 5 BASIC10.07□□□□□ -0.8
Hes1P35428 Fmo1-201ENSMUST00000046049 2388 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Hes1P35428 Trim45-204ENSMUST00000134993 2274 ntAPPRIS ALT2 TSL 1 (best) BASIC10.07□□□□□ -0.8
Hes1P35428 Nmral1-203ENSMUST00000115851 1306 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
Hes1P35428 Gm42427-201ENSMUST00000200473 5292 ntBASIC10.06□□□□□ -0.8
Hes1P35428 Comt-204ENSMUST00000165430 1978 ntAPPRIS P1 TSL 5 BASIC10.06□□□□□ -0.8
Hes1P35428 Slc30a3-206ENSMUST00000202740 1989 ntTSL 5 BASIC10.06□□□□□ -0.8
Hes1P35428 Cldn15-201ENSMUST00000001790 1850 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Hes1P35428 Gm26735-201ENSMUST00000180992 2649 ntTSL 5 BASIC10.06□□□□□ -0.8
Hes1P35428 Gm43858-201ENSMUST00000199418 1778 ntBASIC10.06□□□□□ -0.8
Hes1P35428 Gm37391-201ENSMUST00000194891 2318 ntBASIC10.06□□□□□ -0.8
Hes1P35428 Trpv6-203ENSMUST00000201471 2304 ntAPPRIS P2 TSL 1 (best) BASIC10.06□□□□□ -0.8
Hes1P35428 Gm10578-202ENSMUST00000211070 2876 ntTSL 2 BASIC10.06□□□□□ -0.8
Hes1P35428 4930550L24Rik-201ENSMUST00000062542 1572 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Hes1P35428 Adam32-202ENSMUST00000121438 2450 ntAPPRIS P3 TSL 1 (best) BASIC10.06□□□□□ -0.8
Hes1P35428 Sdc4-201ENSMUST00000017153 2458 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Hes1P35428 Zfp108-201ENSMUST00000072713 1929 ntAPPRIS ALT2 TSL 5 BASIC10.06□□□□□ -0.8
Hes1P35428 Scn8a-203ENSMUST00000108908 7030 ntAPPRIS ALT1 TSL 5 BASIC10.06□□□□□ -0.8
Hes1P35428 Upk3bl-202ENSMUST00000111137 1119 ntAPPRIS ALT2 TSL 1 (best) BASIC10.06□□□□□ -0.8
Hes1P35428 Gm4986-201ENSMUST00000119731 549 ntBASIC10.06□□□□□ -0.8
Hes1P35428 Gm11793-201ENSMUST00000120433 981 ntBASIC10.06□□□□□ -0.8
Hes1P35428 4933407E24Rik-201ENSMUST00000133499 969 ntTSL 2 BASIC10.06□□□□□ -0.8
Hes1P35428 Hoxb5os-202ENSMUST00000150698 596 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
Hes1P35428 Gm12678-201ENSMUST00000154177 692 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
Hes1P35428 Igdcc4-203ENSMUST00000166273 778 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
Hes1P35428 Gm29396-201ENSMUST00000185659 716 ntBASIC10.06□□□□□ -0.8
Hes1P35428 Gm19710-201ENSMUST00000200257 640 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
Hes1P35428 Gm18054-201ENSMUST00000207539 555 ntBASIC10.06□□□□□ -0.8
Hes1P35428 Gm45930-201ENSMUST00000221330 292 ntBASIC10.06□□□□□ -0.8
Hes1P35428 Saa3-201ENSMUST00000006956 555 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Hes1P35428 Ccdc33-202ENSMUST00000098681 1093 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
Hes1P35428 Tekt3-201ENSMUST00000035732 1748 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Hes1P35428 Zfp429-201ENSMUST00000109732 2056 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Hes1P35428 4930432B10Rik-201ENSMUST00000181688 2085 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
Hes1P35428 Adcyap1-201ENSMUST00000064775 2088 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Hes1P35428 Tsku-203ENSMUST00000165257 2514 ntAPPRIS P1 TSL 2 BASIC10.06□□□□□ -0.8
Hes1P35428 Gm31518-201ENSMUST00000211925 2548 ntTSL 5 BASIC10.06□□□□□ -0.8
Hes1P35428 Tmem25-201ENSMUST00000002100 2448 ntAPPRIS P2 TSL 1 (best) BASIC10.06□□□□□ -0.8
Hes1P35428 Kifap3-202ENSMUST00000077642 4012 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
Hes1P35428 Rab11a-208ENSMUST00000172298 2336 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Hes1P35428 Nrf1-207ENSMUST00000115206 1879 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Retrieved 100 of 76,532 protein–RNA pairs in 81.9 ms