Protein–RNA interactions for Protein: P29595

Nedd8, NEDD8, mousemouse

Predictions only

Length 81 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nedd8P29595 Ttc30a2-201ENSMUST00000099995 2431 ntAPPRIS P1 BASIC11.18□□□□□ -0.62
Nedd8P29595 Hars2-206ENSMUST00000152954 3336 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Nedd8P29595 Lclat1-201ENSMUST00000067545 4467 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Nedd8P29595 Tmem135-202ENSMUST00000117852 2986 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Nedd8P29595 Nnt-203ENSMUST00000109204 3198 ntTSL 5 BASIC11.18□□□□□ -0.62
Nedd8P29595 Cd276-201ENSMUST00000039788 3186 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Nedd8P29595 1700110I01Rik-201ENSMUST00000112775 1671 ntTSL 5 BASIC11.17□□□□□ -0.62
Nedd8P29595 Rabep2-202ENSMUST00000106407 2234 ntAPPRIS P2 TSL 1 (best) BASIC11.17□□□□□ -0.62
Nedd8P29595 Lcp2-202ENSMUST00000109329 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC11.17□□□□□ -0.62
Nedd8P29595 Prf1-202ENSMUST00000219375 2474 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Nedd8P29595 Bpi-201ENSMUST00000065039 1926 ntAPPRIS P2 TSL 1 (best) BASIC11.17□□□□□ -0.62
Nedd8P29595 Mrps17-206ENSMUST00000121339 2182 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Nedd8P29595 C2cd5-213ENSMUST00000204655 3526 ntAPPRIS P1 TSL 5 BASIC11.17□□□□□ -0.62
Nedd8P29595 Gm11978-202ENSMUST00000127510 1303 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Nedd8P29595 Add2-204ENSMUST00000203366 3407 ntAPPRIS ALT2 TSL 5 BASIC11.17□□□□□ -0.62
Nedd8P29595 Tsc22d3-203ENSMUST00000112996 1552 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Nedd8P29595 Prkag3-206ENSMUST00000188073 2832 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Nedd8P29595 Fyb2-202ENSMUST00000106804 3068 ntAPPRIS ALT2 TSL 1 (best) BASIC11.17□□□□□ -0.62
Nedd8P29595 App-206ENSMUST00000227723 8167 ntAPPRIS ALT2 BASIC11.17□□□□□ -0.62
Nedd8P29595 4930594M22Rik-202ENSMUST00000161599 3595 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Nedd8P29595 0610010K14Rik-207ENSMUST00000108577 659 ntTSL 5 BASIC11.17□□□□□ -0.62
Nedd8P29595 Gm11779-201ENSMUST00000118541 368 ntBASIC11.17□□□□□ -0.62
Nedd8P29595 4930407G08Rik-201ENSMUST00000145831 698 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Nedd8P29595 Mmgt2-207ENSMUST00000155759 589 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Nedd8P29595 Gm12840-201ENSMUST00000156081 627 ntTSL 5 BASIC11.17□□□□□ -0.62
Nedd8P29595 Psmc3ip-201ENSMUST00000019447 1291 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Nedd8P29595 Mzt1-203ENSMUST00000227948 952 ntBASIC11.17□□□□□ -0.62
Nedd8P29595 Med27-201ENSMUST00000028139 1254 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Nedd8P29595 Ipo4-201ENSMUST00000047131 3846 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Nedd8P29595 Tescl-201ENSMUST00000069562 855 ntAPPRIS P1 BASIC11.17□□□□□ -0.62
Nedd8P29595 Dbf4-204ENSMUST00000168500 2000 ntTSL 5 BASIC11.17□□□□□ -0.62
Nedd8P29595 Sept11-201ENSMUST00000074733 5028 ntAPPRIS P3 TSL 1 (best) BASIC11.17□□□□□ -0.62
Nedd8P29595 Btg2-201ENSMUST00000020692 2743 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Nedd8P29595 Th-202ENSMUST00000105929 1950 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Nedd8P29595 Otof-201ENSMUST00000074171 7129 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Nedd8P29595 Pkp4-201ENSMUST00000037903 4378 ntTSL 5 BASIC11.17□□□□□ -0.62
Nedd8P29595 Pou2f1-202ENSMUST00000069609 2402 ntAPPRIS P3 TSL 1 (best) BASIC11.17□□□□□ -0.62
Nedd8P29595 Atp6v1a-201ENSMUST00000063661 3896 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Nedd8P29595 Gaa-201ENSMUST00000026666 3363 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Nedd8P29595 Fut8-201ENSMUST00000062804 3358 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Nedd8P29595 Lman1l-202ENSMUST00000093832 1685 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Nedd8P29595 Myo1b-201ENSMUST00000018561 4767 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Nedd8P29595 Tmc7-201ENSMUST00000044195 4546 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Nedd8P29595 Ccnc-203ENSMUST00000108240 1406 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Nedd8P29595 Scn8a-203ENSMUST00000108908 7030 ntAPPRIS ALT1 TSL 5 BASIC11.17□□□□□ -0.62
Nedd8P29595 Rnf13-210ENSMUST00000200497 2573 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Nedd8P29595 Als2-204ENSMUST00000163058 5379 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Nedd8P29595 Zscan12-203ENSMUST00000225545 4405 ntAPPRIS P1 BASIC11.17□□□□□ -0.62
Nedd8P29595 Zfp773-201ENSMUST00000032622 3028 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Nedd8P29595 Retsat-205ENSMUST00000176364 1647 ntTSL 5 BASIC11.17□□□□□ -0.62
Nedd8P29595 Dao-202ENSMUST00000112292 2057 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Nedd8P29595 Kalrn-209ENSMUST00000114963 3207 ntTSL 5 BASIC11.16□□□□□ -0.62
Nedd8P29595 Myo15-203ENSMUST00000094135 11715 ntAPPRIS ALT2 TSL 5 BASIC11.16□□□□□ -0.62
Nedd8P29595 Zdbf2-202ENSMUST00000114132 12629 ntAPPRIS P1 TSL 5 BASIC11.16□□□□□ -0.62
Nedd8P29595 Thbs2-201ENSMUST00000170872 5922 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Nedd8P29595 March7-202ENSMUST00000102747 2271 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Nedd8P29595 Ubxn6-201ENSMUST00000019722 2949 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Nedd8P29595 Fbxo43-201ENSMUST00000058643 4035 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Nedd8P29595 Gm28578-201ENSMUST00000187727 2698 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Nedd8P29595 Sephs1-201ENSMUST00000027973 5319 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Nedd8P29595 Edil3-202ENSMUST00000081769 5317 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Nedd8P29595 2900069G24Rik-201ENSMUST00000192780 1311 ntBASIC11.16□□□□□ -0.62
Nedd8P29595 Pcgf3-201ENSMUST00000046975 7708 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Nedd8P29595 Foxn2-201ENSMUST00000112238 5085 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Nedd8P29595 Gm45449-201ENSMUST00000211485 1960 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Nedd8P29595 Ubtf-202ENSMUST00000079589 3286 ntAPPRIS P3 TSL 5 BASIC11.16□□□□□ -0.62
Nedd8P29595 1700010B13Rik-202ENSMUST00000189435 1549 ntTSL 3 BASIC11.16□□□□□ -0.62
Nedd8P29595 Smim12-201ENSMUST00000142029 1022 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Nedd8P29595 Pkig-209ENSMUST00000164399 983 ntAPPRIS P1 TSL 2 BASIC11.16□□□□□ -0.62
Nedd8P29595 Gm23363-201ENSMUST00000175024 79 ntBASIC11.16□□□□□ -0.62
Nedd8P29595 Gm6888-201ENSMUST00000221983 706 ntBASIC11.16□□□□□ -0.62
Nedd8P29595 Slc10a6-201ENSMUST00000031263 2124 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Nedd8P29595 Tspan8-201ENSMUST00000035563 1244 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Nedd8P29595 Ephx4-201ENSMUST00000049146 1279 ntAPPRIS P1 TSL 2 BASIC11.16□□□□□ -0.62
Nedd8P29595 Clec4g-202ENSMUST00000062037 1242 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Nedd8P29595 Olfr1410-201ENSMUST00000079790 969 ntTSL 5 BASIC11.16□□□□□ -0.62
Nedd8P29595 Smtn-210ENSMUST00000170588 3386 ntAPPRIS P2 TSL 1 (best) BASIC11.16□□□□□ -0.62
Nedd8P29595 Nmral1-202ENSMUST00000079130 1459 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Nedd8P29595 Kcnh3-201ENSMUST00000041415 3583 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Nedd8P29595 Plcd4-205ENSMUST00000113749 4648 ntAPPRIS ALT2 TSL 5 BASIC11.16□□□□□ -0.62
Nedd8P29595 4930423D22Rik-201ENSMUST00000221909 1674 ntBASIC11.16□□□□□ -0.62
Nedd8P29595 Fhdc1-201ENSMUST00000091002 4162 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Nedd8P29595 Mfsd13b-201ENSMUST00000033166 1883 ntAPPRIS P2 TSL 1 (best) BASIC11.16□□□□□ -0.62
Nedd8P29595 Derl2-206ENSMUST00000143850 3666 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Nedd8P29595 Atp4a-204ENSMUST00000170371 3447 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Nedd8P29595 Slc9a8-201ENSMUST00000047815 4521 ntAPPRIS P3 TSL 1 (best) BASIC11.16□□□□□ -0.62
Nedd8P29595 Art3-205ENSMUST00000120193 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC11.16□□□□□ -0.62
Nedd8P29595 1700017B05Rik-202ENSMUST00000213199 3722 ntAPPRIS ALT2 TSL 2 BASIC11.16□□□□□ -0.62
Nedd8P29595 Pkn3-201ENSMUST00000045246 3113 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Nedd8P29595 Mospd2-203ENSMUST00000112248 2487 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Nedd8P29595 Src-204ENSMUST00000109531 3586 ntAPPRIS P1 TSL 5 BASIC11.15□□□□□ -0.62
Nedd8P29595 D830039M14Rik-202ENSMUST00000217740 3362 ntBASIC11.15□□□□□ -0.62
Nedd8P29595 Ncor2-202ENSMUST00000086083 8575 ntAPPRIS P2 TSL 5 BASIC11.15□□□□□ -0.62
Nedd8P29595 Elavl2-201ENSMUST00000008633 3730 ntAPPRIS P4 TSL 1 (best) BASIC11.15□□□□□ -0.62
Nedd8P29595 Gm38157-201ENSMUST00000194178 1698 ntBASIC11.15□□□□□ -0.62
Nedd8P29595 Phactr1-201ENSMUST00000066928 2013 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Nedd8P29595 Fbxo40-201ENSMUST00000075869 5137 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Nedd8P29595 Tcf4-251ENSMUST00000202474 1810 ntTSL 5 BASIC11.15□□□□□ -0.62
Nedd8P29595 Rgs19-203ENSMUST00000108771 1110 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Nedd8P29595 Gm12201-201ENSMUST00000120657 1234 ntBASIC11.15□□□□□ -0.62
Retrieved 100 of 76,532 protein–RNA pairs in 52.8 ms