Protein–RNA interactions for Protein: P29533

Vcam1, Vascular cell adhesion protein 1, mousemouse

Predictions only

Length 739 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vcam1P29533 Gm2553-201ENSMUST00000215986 605 ntBASIC13.92□□□□□ -0.18
Vcam1P29533 Gm10752-201ENSMUST00000218348 729 ntBASIC13.92□□□□□ -0.18
Vcam1P29533 AC159103.1-201ENSMUST00000228325 429 ntBASIC13.92□□□□□ -0.18
Vcam1P29533 Cdk19os-201ENSMUST00000044774 534 ntTSL 5 BASIC13.92□□□□□ -0.18
Vcam1P29533 Phxr2-201ENSMUST00000060761 1159 ntAPPRIS P1 BASIC13.92□□□□□ -0.18
Vcam1P29533 Snora73b-201ENSMUST00000083419 205 ntBASIC13.92□□□□□ -0.18
Vcam1P29533 Cep170b-204ENSMUST00000220627 5395 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Vcam1P29533 Ism2-201ENSMUST00000051601 1350 ntTSL 5 BASIC13.92□□□□□ -0.18
Vcam1P29533 Uba6-202ENSMUST00000113373 3504 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Vcam1P29533 Npepps-219ENSMUST00000172108 2924 ntAPPRIS ALT2 TSL 5 BASIC13.92□□□□□ -0.18
Vcam1P29533 Ube2c-201ENSMUST00000001439 2191 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Vcam1P29533 Cenpo-201ENSMUST00000020981 2037 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Vcam1P29533 Krt33a-201ENSMUST00000018399 1683 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Vcam1P29533 Ankrd42-205ENSMUST00000138267 2827 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Vcam1P29533 Plxna1-202ENSMUST00000163139 9034 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Vcam1P29533 Thrb-203ENSMUST00000091471 1758 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Vcam1P29533 Gm20605-201ENSMUST00000177545 4464 ntAPPRIS P1 TSL 2 BASIC13.91□□□□□ -0.18
Vcam1P29533 Tbcel-206ENSMUST00000138506 1534 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
Vcam1P29533 Foxred2-201ENSMUST00000016696 4793 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Vcam1P29533 Neil1-202ENSMUST00000186410 1601 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Vcam1P29533 Mtf2-201ENSMUST00000081567 4060 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Vcam1P29533 Tcf4-205ENSMUST00000114980 2192 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
Vcam1P29533 Ppp3cb-205ENSMUST00000161445 3298 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Vcam1P29533 Rpl19-201ENSMUST00000017548 751 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
Vcam1P29533 Gm9192-201ENSMUST00000183221 985 ntBASIC13.91□□□□□ -0.18
Vcam1P29533 Gm29499-201ENSMUST00000189151 486 ntBASIC13.91□□□□□ -0.18
Vcam1P29533 Gm28329-201ENSMUST00000191208 689 ntBASIC13.91□□□□□ -0.18
Vcam1P29533 Gm29171-201ENSMUST00000191397 486 ntBASIC13.91□□□□□ -0.18
Vcam1P29533 Gm45641-201ENSMUST00000209775 452 ntTSL 5 BASIC13.91□□□□□ -0.18
Vcam1P29533 Gm31479-201ENSMUST00000209936 522 ntTSL 3 BASIC13.91□□□□□ -0.18
Vcam1P29533 1700008C04Rik-201ENSMUST00000218606 797 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Vcam1P29533 5830428M24Rik-204ENSMUST00000223143 1034 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Vcam1P29533 Olfr323-201ENSMUST00000070804 972 ntAPPRIS P1 BASIC13.91□□□□□ -0.18
Vcam1P29533 Rpl19-202ENSMUST00000092425 737 ntAPPRIS ALT1 TSL 3 BASIC13.91□□□□□ -0.18
Vcam1P29533 Tepp-201ENSMUST00000098480 660 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Vcam1P29533 Rtkn2-203ENSMUST00000117086 2246 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Vcam1P29533 Tonsl-207ENSMUST00000168185 4235 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Vcam1P29533 Timp3-201ENSMUST00000020234 4722 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Vcam1P29533 Fam45a-202ENSMUST00000119633 2267 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Vcam1P29533 Ebf1-202ENSMUST00000101326 3422 ntAPPRIS ALT1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Vcam1P29533 Entpd5-203ENSMUST00000110272 4972 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Vcam1P29533 Tfdp1-201ENSMUST00000170909 1700 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.18
Vcam1P29533 Lynx1-201ENSMUST00000023259 4023 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Vcam1P29533 Treh-202ENSMUST00000071219 1927 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Vcam1P29533 Hcls1-201ENSMUST00000023531 2016 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Vcam1P29533 Kcnk16-202ENSMUST00000225596 2127 ntBASIC13.9□□□□□ -0.18
Vcam1P29533 Ntng1-208ENSMUST00000133268 5587 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Vcam1P29533 1700080O16Rik-202ENSMUST00000114866 1232 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Vcam1P29533 Gm11949-201ENSMUST00000117640 372 ntBASIC13.9□□□□□ -0.18
Vcam1P29533 Rpl19-ps1-201ENSMUST00000121059 591 ntBASIC13.9□□□□□ -0.18
Vcam1P29533 Gm24844-201ENSMUST00000158679 127 ntBASIC13.9□□□□□ -0.18
Vcam1P29533 Gm18367-201ENSMUST00000176139 600 ntBASIC13.9□□□□□ -0.18
Vcam1P29533 Gm20662-201ENSMUST00000176356 601 ntAPPRIS P5 TSL 3 BASIC13.9□□□□□ -0.18
Vcam1P29533 Cfap73-201ENSMUST00000177908 921 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.18
Vcam1P29533 Smlr1-201ENSMUST00000179685 669 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Vcam1P29533 Gm38139-201ENSMUST00000195806 704 ntTSL 2 BASIC13.9□□□□□ -0.18
Vcam1P29533 Gm44270-201ENSMUST00000203084 1234 ntBASIC13.9□□□□□ -0.18
Vcam1P29533 Olfr368-202ENSMUST00000217299 1200 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.18
Vcam1P29533 AC153505.1-201ENSMUST00000218819 1071 ntBASIC13.9□□□□□ -0.18
Vcam1P29533 Sept4-203ENSMUST00000107960 1653 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Vcam1P29533 Leng8-201ENSMUST00000037472 5105 ntAPPRIS P2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Vcam1P29533 Tcf4-252ENSMUST00000202477 1873 ntTSL 5 BASIC13.9□□□□□ -0.18
Vcam1P29533 Mybl1-202ENSMUST00000115468 2493 ntTSL 5 BASIC13.9□□□□□ -0.18
Vcam1P29533 Tgm1-202ENSMUST00000168729 2852 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.18
Vcam1P29533 Slc26a5-201ENSMUST00000030878 2962 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Vcam1P29533 Heatr3-201ENSMUST00000034079 3251 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Vcam1P29533 Pnn-201ENSMUST00000021381 3485 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Vcam1P29533 Zfyve28-201ENSMUST00000094868 3983 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Vcam1P29533 Sbno2-209ENSMUST00000219260 4850 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.18
Vcam1P29533 Adora1-201ENSMUST00000038191 3625 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Vcam1P29533 Gm26678-201ENSMUST00000181057 3025 ntTSL 5 BASIC13.9□□□□□ -0.18
Vcam1P29533 Serpinb12-202ENSMUST00000112724 1623 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.19
Vcam1P29533 Dnajb6-203ENSMUST00000114839 1605 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.19
Vcam1P29533 Luc7l3-209ENSMUST00000166312 5244 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Vcam1P29533 Mei4-201ENSMUST00000057067 2670 ntAPPRIS P2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Vcam1P29533 Rbpjl-201ENSMUST00000017151 2456 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Vcam1P29533 Fam126a-203ENSMUST00000115109 2195 ntTSL 5 BASIC13.89□□□□□ -0.19
Vcam1P29533 Rbl2-208ENSMUST00000209518 4792 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Vcam1P29533 Qrfp-201ENSMUST00000057407 2927 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Vcam1P29533 Sugp2-201ENSMUST00000093458 3874 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Vcam1P29533 Pank4-202ENSMUST00000070953 2706 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Vcam1P29533 C130012C08Rik-201ENSMUST00000194287 3665 ntBASIC13.89□□□□□ -0.19
Vcam1P29533 Rps6ka6-210ENSMUST00000137712 2410 ntAPPRIS ALT2 TSL 5 BASIC13.89□□□□□ -0.19
Vcam1P29533 Stx3-203ENSMUST00000075304 2430 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Vcam1P29533 Tirap-203ENSMUST00000176531 2310 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Vcam1P29533 Acsf3-201ENSMUST00000015160 2206 ntAPPRIS P2 TSL 5 BASIC13.89□□□□□ -0.19
Vcam1P29533 Ifna15-201ENSMUST00000102809 573 ntAPPRIS P1 BASIC13.89□□□□□ -0.19
Vcam1P29533 Stau1-204ENSMUST00000109238 2976 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Vcam1P29533 Tsc22d4-204ENSMUST00000110983 1043 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Vcam1P29533 Map2k7-205ENSMUST00000110996 1188 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Vcam1P29533 Apoo-202ENSMUST00000113896 1032 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Vcam1P29533 Zbtb20-205ENSMUST00000114695 2977 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
Vcam1P29533 Gm16166-201ENSMUST00000118291 787 ntBASIC13.89□□□□□ -0.19
Vcam1P29533 Gm5380-201ENSMUST00000119296 2136 ntBASIC13.89□□□□□ -0.19
Vcam1P29533 Rpsa-ps4-201ENSMUST00000121691 888 ntBASIC13.89□□□□□ -0.19
Vcam1P29533 Gm28727-201ENSMUST00000176549 443 ntTSL 3 BASIC13.89□□□□□ -0.19
Vcam1P29533 Plac9a-202ENSMUST00000183431 536 ntTSL 3 BASIC13.89□□□□□ -0.19
Vcam1P29533 Plac9b-204ENSMUST00000184675 536 ntTSL 3 BASIC13.89□□□□□ -0.19
Vcam1P29533 Gm5852-201ENSMUST00000194119 1021 ntBASIC13.89□□□□□ -0.19
Vcam1P29533 Gm43186-201ENSMUST00000198130 824 ntBASIC13.89□□□□□ -0.19
Retrieved 100 of 76,532 protein–RNA pairs in 56.9 ms