Protein–RNA interactions for Protein: P28481

Col2a1, Collagen alpha-1(II) chain, mousemouse

Predictions only

Length 1,487 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col2a1P28481 Akr1b10-202ENSMUST00000115051 1022 ntTSL 5 BASIC13.61□□□□□ -0.23
Col2a1P28481 Gm14199-201ENSMUST00000130021 495 ntTSL 2 BASIC13.61□□□□□ -0.23
Col2a1P28481 1700007P06Rik-201ENSMUST00000160380 823 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Col2a1P28481 H1foo-203ENSMUST00000161969 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Col2a1P28481 Nlrp5-ps-202ENSMUST00000173220 1294 ntBASIC13.61□□□□□ -0.23
Col2a1P28481 Gm20442-201ENSMUST00000174630 492 ntTSL 3 BASIC13.61□□□□□ -0.23
Col2a1P28481 Gm27232-201ENSMUST00000184373 597 ntTSL 3 BASIC13.61□□□□□ -0.23
Col2a1P28481 Gm9645-201ENSMUST00000197131 792 ntBASIC13.61□□□□□ -0.23
Col2a1P28481 Olfr1380-201ENSMUST00000204300 938 ntAPPRIS P1 BASIC13.61□□□□□ -0.23
Col2a1P28481 AC154257.1-202ENSMUST00000224729 843 ntBASIC13.61□□□□□ -0.23
Col2a1P28481 Sema4a-213ENSMUST00000165898 3125 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
Col2a1P28481 Rtn4rl1-201ENSMUST00000102514 3525 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Col2a1P28481 Prkar1b-202ENSMUST00000110889 2457 ntTSL 5 BASIC13.61□□□□□ -0.23
Col2a1P28481 Stau1-203ENSMUST00000109236 2860 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
Col2a1P28481 Tssk4-201ENSMUST00000007735 1420 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Col2a1P28481 Gm43760-201ENSMUST00000202120 3015 ntBASIC13.61□□□□□ -0.23
Col2a1P28481 Adora1-201ENSMUST00000038191 3625 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Col2a1P28481 Kitl-202ENSMUST00000105283 5648 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Col2a1P28481 Pard3-222ENSMUST00000162536 5175 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
Col2a1P28481 Lhcgr-201ENSMUST00000024916 2553 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Col2a1P28481 Gm38100-202ENSMUST00000201297 1789 ntAPPRIS P2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Col2a1P28481 Usp10-210ENSMUST00000144458 3726 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
Col2a1P28481 Camsap1-201ENSMUST00000091268 7978 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
Col2a1P28481 Lcor-201ENSMUST00000067795 4810 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Col2a1P28481 Ildr1-202ENSMUST00000089618 2850 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Col2a1P28481 Ddi2-201ENSMUST00000102484 9553 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Col2a1P28481 Tbc1d22bos-202ENSMUST00000163069 1349 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Col2a1P28481 Rtp4-202ENSMUST00000209422 1859 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
Col2a1P28481 Mul1-202ENSMUST00000105813 3944 ntTSL 5 BASIC13.61□□□□□ -0.23
Col2a1P28481 Hnrnpa2b1-202ENSMUST00000090002 1662 ntAPPRIS P2 TSL 5 BASIC13.61□□□□□ -0.23
Col2a1P28481 Nfatc1-202ENSMUST00000078049 4607 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Col2a1P28481 Snhg18-201ENSMUST00000181536 1486 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Col2a1P28481 Coro6-202ENSMUST00000052515 1476 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Col2a1P28481 Fbln1-201ENSMUST00000057410 3659 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
Col2a1P28481 Dmac2-202ENSMUST00000085953 2387 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
Col2a1P28481 Gatb-202ENSMUST00000107672 1820 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Col2a1P28481 Cela3b-201ENSMUST00000102522 926 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Col2a1P28481 Gm11628-201ENSMUST00000117568 171 ntBASIC13.61□□□□□ -0.23
Col2a1P28481 Gm15374-201ENSMUST00000119313 844 ntBASIC13.61□□□□□ -0.23
Col2a1P28481 Gm13830-203ENSMUST00000148916 247 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Col2a1P28481 Gzmc-201ENSMUST00000015585 894 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Col2a1P28481 Gm6408-201ENSMUST00000179032 1171 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
Col2a1P28481 Pmvk-204ENSMUST00000198440 978 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Col2a1P28481 3110031N09Rik-201ENSMUST00000201115 326 ntBASIC13.61□□□□□ -0.23
Col2a1P28481 AC027700.1-201ENSMUST00000213965 370 ntTSL 5 BASIC13.61□□□□□ -0.23
Col2a1P28481 CT009546.1-201ENSMUST00000222573 1120 ntBASIC13.61□□□□□ -0.23
Col2a1P28481 Ccdc28b-201ENSMUST00000030586 879 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Col2a1P28481 Ksr1-207ENSMUST00000226282 5260 ntBASIC13.61□□□□□ -0.23
Col2a1P28481 Map4k1-203ENSMUST00000208227 2720 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Col2a1P28481 Map4k1-201ENSMUST00000085835 2724 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Col2a1P28481 Zfyve28-201ENSMUST00000094868 3983 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Col2a1P28481 Tsku-203ENSMUST00000165257 2514 ntAPPRIS P1 TSL 2 BASIC13.61□□□□□ -0.23
Col2a1P28481 Atp2a3-202ENSMUST00000108484 4467 ntAPPRIS ALT2 TSL 5 BASIC13.6□□□□□ -0.23
Col2a1P28481 Cpa5-202ENSMUST00000115138 1778 ntTSL 5 BASIC13.6□□□□□ -0.23
Col2a1P28481 Gdf6-201ENSMUST00000057613 3532 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Col2a1P28481 Slc22a16-201ENSMUST00000019978 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Col2a1P28481 Kcng1-202ENSMUST00000109191 4089 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
Col2a1P28481 Srsf5-201ENSMUST00000094693 1527 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
Col2a1P28481 Hspa8-202ENSMUST00000117557 2019 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Col2a1P28481 Mbnl2-208ENSMUST00000227594 2334 ntAPPRIS P1 BASIC13.6□□□□□ -0.23
Col2a1P28481 Padi6-201ENSMUST00000038749 2333 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Col2a1P28481 Nol4-206ENSMUST00000164186 2622 ntAPPRIS P4 TSL 5 BASIC13.6□□□□□ -0.23
Col2a1P28481 Angel2-202ENSMUST00000066632 3714 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Col2a1P28481 Ythdc2-201ENSMUST00000037763 7215 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Col2a1P28481 S100a4-201ENSMUST00000001046 498 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Col2a1P28481 Smim1-204ENSMUST00000130175 477 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
Col2a1P28481 Smim1-206ENSMUST00000132541 490 ntAPPRIS P1 TSL 3 BASIC13.6□□□□□ -0.23
Col2a1P28481 Slpi-202ENSMUST00000165980 488 ntAPPRIS ALT2 TSL 3 BASIC13.6□□□□□ -0.23
Col2a1P28481 4930477O15Rik-201ENSMUST00000196484 1089 ntBASIC13.6□□□□□ -0.23
Col2a1P28481 Gm8574-201ENSMUST00000203207 924 ntBASIC13.6□□□□□ -0.23
Col2a1P28481 Gm44158-201ENSMUST00000203881 505 ntBASIC13.6□□□□□ -0.23
Col2a1P28481 Prm3-201ENSMUST00000050864 410 ntAPPRIS P1 BASIC13.6□□□□□ -0.23
Col2a1P28481 Lmx1b-201ENSMUST00000041730 4790 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Col2a1P28481 Prkcd-204ENSMUST00000112206 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Col2a1P28481 Ikzf4-203ENSMUST00000221150 2213 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Col2a1P28481 Tfe3-205ENSMUST00000115678 2658 ntTSL 5 BASIC13.6□□□□□ -0.23
Col2a1P28481 Efr3a-205ENSMUST00000173858 2848 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Col2a1P28481 Klhl26-201ENSMUST00000066597 2991 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Col2a1P28481 Itga3-203ENSMUST00000120375 4697 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Col2a1P28481 Bbip1-201ENSMUST00000135402 2488 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Col2a1P28481 Lsamp-208ENSMUST00000189358 2766 ntTSL 5 BASIC13.59□□□□□ -0.23
Col2a1P28481 Camsap1-202ENSMUST00000114167 7981 ntAPPRIS P2 TSL 5 BASIC13.59□□□□□ -0.23
Col2a1P28481 Gm26852-201ENSMUST00000180691 5751 ntTSL 5 BASIC13.59□□□□□ -0.23
Col2a1P28481 Sh3kbp1-201ENSMUST00000073094 2280 ntTSL 5 BASIC13.59□□□□□ -0.23
Col2a1P28481 Palm-204ENSMUST00000218631 2725 ntTSL 2 BASIC13.59□□□□□ -0.23
Col2a1P28481 Galnt6-201ENSMUST00000052069 3798 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Col2a1P28481 Taf3-201ENSMUST00000026888 4792 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Col2a1P28481 Tmem206-201ENSMUST00000027940 2246 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Col2a1P28481 Ubqln5-201ENSMUST00000053743 1915 ntAPPRIS P1 BASIC13.59□□□□□ -0.23
Col2a1P28481 Ifi47-202ENSMUST00000109202 1773 ntAPPRIS P1 TSL 2 BASIC13.59□□□□□ -0.23
Col2a1P28481 Dnajc6-205ENSMUST00000106933 5191 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Col2a1P28481 Sbk1-201ENSMUST00000056028 4109 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Col2a1P28481 Itgav-202ENSMUST00000111740 6788 ntAPPRIS ALT2 TSL 5 BASIC13.59□□□□□ -0.23
Col2a1P28481 Plpbp-201ENSMUST00000033875 3603 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Col2a1P28481 Gm42928-201ENSMUST00000197338 3339 ntBASIC13.59□□□□□ -0.23
Col2a1P28481 Ap1g2-211ENSMUST00000170285 2596 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
Col2a1P28481 Pdzk1-201ENSMUST00000058865 2406 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Col2a1P28481 Clps-202ENSMUST00000114785 369 ntTSL 2 BASIC13.59□□□□□ -0.23
Col2a1P28481 Tmem40-206ENSMUST00000170625 843 ntAPPRIS ALT2 TSL 3 BASIC13.59□□□□□ -0.23
Col2a1P28481 Gm7271-202ENSMUST00000191515 836 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 60 ms