Protein–RNA interactions for Protein: P27548

Cd40lg, CD40 ligand, mousemouse

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cd40lgP27548 Olfr1209-201ENSMUST00000099809 933 ntAPPRIS P1 BASIC11.27□□□□□ -0.61
Cd40lgP27548 Rbm39-203ENSMUST00000109587 2810 ntAPPRIS P3 TSL 1 (best) BASIC11.27□□□□□ -0.61
Cd40lgP27548 Pyroxd1-201ENSMUST00000041852 2831 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Cd40lgP27548 Dab2ip-209ENSMUST00000135741 4128 ntAPPRIS ALT2 TSL 1 (best) BASIC11.27□□□□□ -0.61
Cd40lgP27548 Esrp1-203ENSMUST00000108311 3864 ntTSL 5 BASIC11.27□□□□□ -0.61
Cd40lgP27548 BC067074-203ENSMUST00000136755 8274 ntAPPRIS P1 TSL 5 BASIC11.27□□□□□ -0.61
Cd40lgP27548 Gm5936-201ENSMUST00000114116 2857 ntAPPRIS P1 TSL 3 BASIC11.27□□□□□ -0.61
Cd40lgP27548 Gm5640-201ENSMUST00000114119 2861 ntAPPRIS P1 TSL 3 BASIC11.27□□□□□ -0.61
Cd40lgP27548 Gm26703-201ENSMUST00000181370 2864 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Cd40lgP27548 DXBay18-201ENSMUST00000080324 2862 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Cd40lgP27548 Gm14685-201ENSMUST00000088459 2864 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Cd40lgP27548 Cdk10-212ENSMUST00000213005 1580 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Cd40lgP27548 Ttc17-202ENSMUST00000094801 3408 ntTSL 5 BASIC11.27□□□□□ -0.61
Cd40lgP27548 Rad9b-202ENSMUST00000117263 2371 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Cd40lgP27548 Ercc4-201ENSMUST00000023206 3480 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Cd40lgP27548 Mfrp-201ENSMUST00000034654 4316 ntAPPRIS P3 TSL 1 (best) BASIC11.27□□□□□ -0.61
Cd40lgP27548 Hpcal4-202ENSMUST00000106246 1627 ntAPPRIS P1 TSL 5 BASIC11.27□□□□□ -0.61
Cd40lgP27548 Hmga1-203ENSMUST00000117600 1635 ntAPPRIS P3 TSL 1 (best) BASIC11.27□□□□□ -0.61
Cd40lgP27548 Prrxl1-201ENSMUST00000068938 1610 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Cd40lgP27548 Ctps2-206ENSMUST00000112303 3289 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Cd40lgP27548 Dppa4-201ENSMUST00000050705 1378 ntAPPRIS ALT2 TSL 5 BASIC11.27□□□□□ -0.61
Cd40lgP27548 Usp20-201ENSMUST00000061544 1360 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Cd40lgP27548 Pex19-201ENSMUST00000075895 1917 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Cd40lgP27548 Rtn3-204ENSMUST00000088171 4973 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Cd40lgP27548 Slc39a6-201ENSMUST00000070726 3882 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Cd40lgP27548 Gm7104-201ENSMUST00000179741 2532 ntBASIC11.27□□□□□ -0.61
Cd40lgP27548 Bud13-201ENSMUST00000074957 2539 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Cd40lgP27548 Mirt1-203ENSMUST00000181539 2259 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Cd40lgP27548 Mrps26-202ENSMUST00000145614 4278 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Cd40lgP27548 Dync1i1-204ENSMUST00000115559 2599 ntAPPRIS P3 TSL 1 (best) BASIC11.26□□□□□ -0.61
Cd40lgP27548 Slc6a2-202ENSMUST00000165470 6007 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Cd40lgP27548 Aacs-201ENSMUST00000031445 3239 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Cd40lgP27548 Ascc1-202ENSMUST00000164083 1473 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Cd40lgP27548 Gm43045-201ENSMUST00000198725 2095 ntBASIC11.26□□□□□ -0.61
Cd40lgP27548 Gm38385-201ENSMUST00000194454 2351 ntBASIC11.26□□□□□ -0.61
Cd40lgP27548 Khdrbs2-205ENSMUST00000189878 3259 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Cd40lgP27548 Slc25a25-201ENSMUST00000028160 3294 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Cd40lgP27548 Rmi1-201ENSMUST00000042450 3855 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Cd40lgP27548 B3galt5-201ENSMUST00000099497 5147 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Cd40lgP27548 Polr3e-202ENSMUST00000106483 3001 ntAPPRIS P3 TSL 5 BASIC11.26□□□□□ -0.61
Cd40lgP27548 Daxx-207ENSMUST00000174146 2424 ntAPPRIS P2 TSL 1 (best) BASIC11.26□□□□□ -0.61
Cd40lgP27548 Skp2-203ENSMUST00000190131 1819 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Cd40lgP27548 Chmp5-201ENSMUST00000030128 1519 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Cd40lgP27548 Mfsd4b5-205ENSMUST00000170579 1554 ntAPPRIS P1 TSL 2 BASIC11.26□□□□□ -0.61
Cd40lgP27548 Gm26588-202ENSMUST00000181355 2538 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Cd40lgP27548 Derl2-202ENSMUST00000108523 884 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Cd40lgP27548 Rbm3-204ENSMUST00000115617 1152 ntAPPRIS P3 TSL 1 (best) BASIC11.26□□□□□ -0.61
Cd40lgP27548 0610037L13Rik-205ENSMUST00000119394 741 ntTSL 3 BASIC11.26□□□□□ -0.61
Cd40lgP27548 Gm14726-201ENSMUST00000120623 896 ntBASIC11.26□□□□□ -0.61
Cd40lgP27548 Gm16087-201ENSMUST00000124395 964 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Cd40lgP27548 Gm12199-201ENSMUST00000137567 517 ntTSL 3 BASIC11.26□□□□□ -0.61
Cd40lgP27548 Gm833-201ENSMUST00000143133 884 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Cd40lgP27548 Gm20498-202ENSMUST00000164386 1043 ntTSL 2 BASIC11.26□□□□□ -0.61
Cd40lgP27548 Anapc16-205ENSMUST00000182912 566 ntTSL 2 BASIC11.26□□□□□ -0.61
Cd40lgP27548 Mir8109-201ENSMUST00000184375 117 ntBASIC11.26□□□□□ -0.61
Cd40lgP27548 Gm43758-201ENSMUST00000199500 367 ntBASIC11.26□□□□□ -0.61
Cd40lgP27548 Gm7118-201ENSMUST00000200167 1003 ntBASIC11.26□□□□□ -0.61
Cd40lgP27548 Rpl7a-ps2-201ENSMUST00000200554 774 ntBASIC11.26□□□□□ -0.61
Cd40lgP27548 4933436H12Rik-201ENSMUST00000207304 658 ntTSL 5 BASIC11.26□□□□□ -0.61
Cd40lgP27548 Gm39929-201ENSMUST00000209672 693 ntTSL 3 BASIC11.26□□□□□ -0.61
Cd40lgP27548 AC112680.3-201ENSMUST00000215297 488 ntTSL 3 BASIC11.26□□□□□ -0.61
Cd40lgP27548 Hspb2-202ENSMUST00000217159 552 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Cd40lgP27548 Gm9004-201ENSMUST00000218739 1222 ntBASIC11.26□□□□□ -0.61
Cd40lgP27548 Tnfrsf17-201ENSMUST00000023140 815 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Cd40lgP27548 Gm10076-201ENSMUST00000073238 384 ntBASIC11.26□□□□□ -0.61
Cd40lgP27548 Abca3-202ENSMUST00000079594 6380 ntAPPRIS P2 TSL 5 BASIC11.26□□□□□ -0.61
Cd40lgP27548 AC166574.4-201ENSMUST00000227165 1937 ntBASIC11.26□□□□□ -0.61
Cd40lgP27548 Gm2673-201ENSMUST00000120958 1608 ntBASIC11.26□□□□□ -0.61
Cd40lgP27548 Gm37737-201ENSMUST00000195013 1638 ntBASIC11.26□□□□□ -0.61
Cd40lgP27548 Pcsk7-209ENSMUST00000216672 3599 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Cd40lgP27548 Cul5-201ENSMUST00000034529 3585 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Cd40lgP27548 Tuba1a-201ENSMUST00000097014 1647 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Cd40lgP27548 Cacnb2-203ENSMUST00000114723 3945 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Cd40lgP27548 Gm43075-201ENSMUST00000198613 3905 ntBASIC11.26□□□□□ -0.61
Cd40lgP27548 Dner-201ENSMUST00000049126 3632 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Cd40lgP27548 H2-Ob-204ENSMUST00000173764 1319 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Cd40lgP27548 Uchl1os-201ENSMUST00000152002 1685 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Cd40lgP27548 Bpifb6-201ENSMUST00000088955 1669 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Cd40lgP27548 AC211878.3-201ENSMUST00000222629 2018 ntBASIC11.26□□□□□ -0.61
Cd40lgP27548 Tat-201ENSMUST00000001720 2375 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Cd40lgP27548 Rasl12-201ENSMUST00000085453 2390 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Cd40lgP27548 Nfatc2-209ENSMUST00000171689 2742 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Cd40lgP27548 Ppp1r9b-202ENSMUST00000107748 3095 ntAPPRIS ALT2 TSL 1 (best) BASIC11.26□□□□□ -0.61
Cd40lgP27548 Hook2-204ENSMUST00000210326 3080 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Cd40lgP27548 Cnmd-203ENSMUST00000165835 1362 ntAPPRIS ALT2 TSL 1 (best) BASIC11.26□□□□□ -0.61
Cd40lgP27548 Jmjd8-201ENSMUST00000026832 2091 ntAPPRIS P2 TSL 1 (best) BASIC11.26□□□□□ -0.61
Cd40lgP27548 Zdbf2-202ENSMUST00000114132 12629 ntAPPRIS P1 TSL 5 BASIC11.26□□□□□ -0.61
Cd40lgP27548 Actrt2-201ENSMUST00000060062 1435 ntAPPRIS P1 BASIC11.26□□□□□ -0.61
Cd40lgP27548 Lrrc20-201ENSMUST00000049242 3216 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Cd40lgP27548 Shroom1-202ENSMUST00000093114 2886 ntTSL 2 BASIC11.26□□□□□ -0.61
Cd40lgP27548 Slc2a4-201ENSMUST00000018710 2524 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Cd40lgP27548 Tmem115-201ENSMUST00000010189 2194 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Cd40lgP27548 Car10-201ENSMUST00000042943 3293 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Cd40lgP27548 Prss30-201ENSMUST00000024936 1470 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Cd40lgP27548 Vezf1-201ENSMUST00000018521 4583 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Cd40lgP27548 Gm5859-201ENSMUST00000165401 2324 ntBASIC11.25□□□□□ -0.61
Cd40lgP27548 Zfp207-206ENSMUST00000165565 2311 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Cd40lgP27548 Gm6015-201ENSMUST00000217493 1586 ntBASIC11.25□□□□□ -0.61
Cd40lgP27548 Ufd1-201ENSMUST00000005394 1996 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Cd40lgP27548 Bcas3-202ENSMUST00000092821 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC11.25□□□□□ -0.61
Retrieved 100 of 76,532 protein–RNA pairs in 29.3 ms