Protein–RNA interactions for Protein: P22518

Clk1, Dual specificity protein kinase CLK1, mousemouse

Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clk1P22518 Alms1-ps2-201ENSMUST00000160606 1170 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Clk1P22518 Men1-210ENSMUST00000166909 295 ntTSL 3 BASIC11.43□□□□□ -0.58
Clk1P22518 Gm17180-201ENSMUST00000172211 435 ntTSL 3 BASIC11.43□□□□□ -0.58
Clk1P22518 Gm8738-201ENSMUST00000172606 329 ntBASIC11.43□□□□□ -0.58
Clk1P22518 1700122O11Rik-201ENSMUST00000178823 771 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Clk1P22518 Gm37008-201ENSMUST00000195712 319 ntBASIC11.43□□□□□ -0.58
Clk1P22518 Gm42627-201ENSMUST00000197347 224 ntBASIC11.43□□□□□ -0.58
Clk1P22518 Tmem176b-206ENSMUST00000203355 1202 ntAPPRIS P1 TSL 5 BASIC11.43□□□□□ -0.58
Clk1P22518 Rps12-203ENSMUST00000218107 584 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Clk1P22518 Gm19309-201ENSMUST00000218295 205 ntBASIC11.43□□□□□ -0.58
Clk1P22518 AC133598.1-201ENSMUST00000224327 660 ntBASIC11.43□□□□□ -0.58
Clk1P22518 Dph3-201ENSMUST00000022461 1057 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Clk1P22518 H2-Oa-201ENSMUST00000025192 1088 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Clk1P22518 Il25-201ENSMUST00000037863 1064 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Clk1P22518 Rpsa-ps10-201ENSMUST00000057740 885 ntBASIC11.43□□□□□ -0.58
Clk1P22518 Olfr223-201ENSMUST00000061293 1111 ntAPPRIS P1 BASIC11.43□□□□□ -0.58
Clk1P22518 Pcgf1-201ENSMUST00000092614 866 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Clk1P22518 Mfrp-201ENSMUST00000034654 4316 ntAPPRIS P3 TSL 1 (best) BASIC11.43□□□□□ -0.58
Clk1P22518 Slc39a9-208ENSMUST00000219706 5427 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Clk1P22518 Gm20427-201ENSMUST00000168978 3703 ntTSL 2 BASIC11.43□□□□□ -0.58
Clk1P22518 Lrrn1-201ENSMUST00000049285 3700 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Clk1P22518 Tnn-202ENSMUST00000131919 3987 ntTSL 5 BASIC11.43□□□□□ -0.58
Clk1P22518 Prss43-201ENSMUST00000077549 2327 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Clk1P22518 4933406M09Rik-201ENSMUST00000162187 1768 ntAPPRIS P1 TSL 2 BASIC11.43□□□□□ -0.58
Clk1P22518 Armcx2-202ENSMUST00000113193 3666 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Clk1P22518 Dmbt1-206ENSMUST00000213064 5779 ntTSL 5 BASIC11.43□□□□□ -0.58
Clk1P22518 Rin2-202ENSMUST00000110005 4641 ntAPPRIS ALT2 TSL 5 BASIC11.43□□□□□ -0.58
Clk1P22518 Setd1a-201ENSMUST00000047075 6487 ntAPPRIS P1 TSL 5 BASIC11.43□□□□□ -0.58
Clk1P22518 Cux1-204ENSMUST00000175975 10945 ntAPPRIS ALT2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Clk1P22518 Bcl2l14-201ENSMUST00000032321 2243 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Clk1P22518 Jrk-201ENSMUST00000050234 5853 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Clk1P22518 Lsg1-201ENSMUST00000117363 3180 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Clk1P22518 Npr2-201ENSMUST00000030191 3660 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Clk1P22518 Mast1-201ENSMUST00000109741 4872 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Clk1P22518 Gm26799-201ENSMUST00000180959 1361 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Clk1P22518 Recql-201ENSMUST00000032370 2112 ntAPPRIS ALT2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Clk1P22518 Ptpn9-201ENSMUST00000034832 4101 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Clk1P22518 Drd1-202ENSMUST00000221470 3576 ntAPPRIS ALT2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Clk1P22518 Epb41l1-206ENSMUST00000109577 6251 ntTSL 5 BASIC11.42□□□□□ -0.58
Clk1P22518 Dbh-201ENSMUST00000000910 2552 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Clk1P22518 Dnmt3l-205ENSMUST00000138785 1822 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Clk1P22518 Arhgef2-219ENSMUST00000176500 4492 ntAPPRIS ALT2 TSL 5 BASIC11.42□□□□□ -0.58
Clk1P22518 Eef2k-203ENSMUST00000106488 2537 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Clk1P22518 Slc38a3-202ENSMUST00000167868 3151 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Clk1P22518 Cdadc1-201ENSMUST00000022555 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Clk1P22518 Gpatch4-203ENSMUST00000193398 2210 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Clk1P22518 Crybg2-201ENSMUST00000121391 4761 ntAPPRIS P2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Clk1P22518 Ins2-203ENSMUST00000105931 472 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Clk1P22518 1700042G07Rik-201ENSMUST00000106492 385 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Clk1P22518 Cabp1-203ENSMUST00000112112 746 ntAPPRIS ALT1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Clk1P22518 Gm12742-201ENSMUST00000117326 410 ntBASIC11.42□□□□□ -0.58
Clk1P22518 Ccdc169-203ENSMUST00000118963 740 ntTSL 3 BASIC11.42□□□□□ -0.58
Clk1P22518 Rmrp-201ENSMUST00000157463 271 ntBASIC11.42□□□□□ -0.58
Clk1P22518 C130026I21Rik-205ENSMUST00000161267 652 ntAPPRIS ALT2 TSL 3 BASIC11.42□□□□□ -0.58
Clk1P22518 Gm6222-202ENSMUST00000182143 629 ntBASIC11.42□□□□□ -0.58
Clk1P22518 1500004A13Rik-208ENSMUST00000184958 823 ntTSL 3 BASIC11.42□□□□□ -0.58
Clk1P22518 Gm28913-201ENSMUST00000186240 364 ntTSL 3 BASIC11.42□□□□□ -0.58
Clk1P22518 1700120C14Rik-202ENSMUST00000187967 391 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Clk1P22518 Gm19184-201ENSMUST00000196798 928 ntBASIC11.42□□□□□ -0.58
Clk1P22518 Tmem176b-209ENSMUST00000204073 986 ntAPPRIS P1 TSL 2 BASIC11.42□□□□□ -0.58
Clk1P22518 Gm45437-201ENSMUST00000209998 448 ntTSL 3 BASIC11.42□□□□□ -0.58
Clk1P22518 AL732506.1-201ENSMUST00000226420 281 ntBASIC11.42□□□□□ -0.58
Clk1P22518 Ccdc169-202ENSMUST00000061099 887 ntAPPRIS P1 TSL 5 BASIC11.42□□□□□ -0.58
Clk1P22518 Wnt5a-201ENSMUST00000063465 7010 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Clk1P22518 Slc39a9-204ENSMUST00000217889 2155 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Clk1P22518 Gm18227-201ENSMUST00000211082 1468 ntBASIC11.42□□□□□ -0.58
Clk1P22518 Daam2-202ENSMUST00000224595 1926 ntBASIC11.42□□□□□ -0.58
Clk1P22518 Gm26865-201ENSMUST00000180970 3284 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Clk1P22518 Rims3-202ENSMUST00000106283 6437 ntAPPRIS P1 TSL 5 BASIC11.42□□□□□ -0.58
Clk1P22518 Rgma-202ENSMUST00000119206 3481 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Clk1P22518 Slc25a22-223ENSMUST00000201710 2565 ntAPPRIS P1 TSL 5 BASIC11.42□□□□□ -0.58
Clk1P22518 Slc10a6-201ENSMUST00000031263 2124 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Clk1P22518 Tpm3-rs7-201ENSMUST00000072359 2147 ntAPPRIS P1 BASIC11.42□□□□□ -0.58
Clk1P22518 Osgepl1-201ENSMUST00000027265 1868 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Clk1P22518 4933421I07Rik-201ENSMUST00000032648 1413 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Clk1P22518 Ccpg1-201ENSMUST00000037977 3151 ntAPPRIS P3 TSL 1 (best) BASIC11.42□□□□□ -0.58
Clk1P22518 Akp-ps1-201ENSMUST00000188050 1600 ntBASIC11.42□□□□□ -0.58
Clk1P22518 Galnt6-201ENSMUST00000052069 3798 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Clk1P22518 Pdlim5-206ENSMUST00000195975 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Clk1P22518 Anks1b-216ENSMUST00000182430 3305 ntTSL 5 BASIC11.42□□□□□ -0.58
Clk1P22518 Gm21039-201ENSMUST00000223359 2012 ntBASIC11.42□□□□□ -0.58
Clk1P22518 Armcx6-201ENSMUST00000052431 2024 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Clk1P22518 Bckdhb-205ENSMUST00000190166 1398 ntAPPRIS P3 TSL 1 (best) BASIC11.41□□□□□ -0.58
Clk1P22518 Lrrfip2-214ENSMUST00000217117 1363 ntTSL 5 BASIC11.41□□□□□ -0.58
Clk1P22518 Gm43174-201ENSMUST00000195914 2445 ntBASIC11.41□□□□□ -0.58
Clk1P22518 Plekha2-204ENSMUST00000128715 3463 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Clk1P22518 Cd27-201ENSMUST00000032486 1559 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Clk1P22518 Dcaf1-202ENSMUST00000159645 4945 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Clk1P22518 Myo18a-202ENSMUST00000092884 5117 ntAPPRIS ALT2 TSL 5 BASIC11.41□□□□□ -0.58
Clk1P22518 Spesp1-201ENSMUST00000056949 3042 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Clk1P22518 Cngb1-203ENSMUST00000120044 3243 ntAPPRIS ALT2 TSL 5 BASIC11.41□□□□□ -0.58
Clk1P22518 Slc30a3-206ENSMUST00000202740 1989 ntTSL 5 BASIC11.41□□□□□ -0.58
Clk1P22518 Mtus1-202ENSMUST00000059115 6548 ntTSL 5 BASIC11.41□□□□□ -0.58
Clk1P22518 Mtmr2-201ENSMUST00000034396 3788 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Clk1P22518 Ntrk2-202ENSMUST00000109838 6846 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Clk1P22518 Banp-210ENSMUST00000173254 1521 ntAPPRIS P1 TSL 5 BASIC11.41□□□□□ -0.58
Clk1P22518 Usp20-211ENSMUST00000170476 4970 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Clk1P22518 Gabrg3-201ENSMUST00000068394 1724 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Clk1P22518 Gba-202ENSMUST00000167998 1938 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Clk1P22518 Plch2-206ENSMUST00000135665 4349 ntAPPRIS ALT2 TSL 5 BASIC11.41□□□□□ -0.58
Retrieved 100 of 76,532 protein–RNA pairs in 30.2 ms