Protein–RNA interactions for Protein: P21237

Bdnf, Brain-derived neurotrophic factor, mousemouse

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BdnfP21237 Cabp2-202ENSMUST00000159556 781 ntAPPRIS ALT2 TSL 1 (best) BASIC11.69□□□□□ -0.54
BdnfP21237 Gm43818-201ENSMUST00000200605 466 ntBASIC11.69□□□□□ -0.54
BdnfP21237 Gm9299-201ENSMUST00000206392 1140 ntBASIC11.69□□□□□ -0.54
BdnfP21237 Ceacam1-209ENSMUST00000206687 1061 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
BdnfP21237 1700023F06Rik-201ENSMUST00000021323 1199 ntAPPRIS P2 TSL 5 BASIC11.69□□□□□ -0.54
BdnfP21237 AC152453.1-201ENSMUST00000218802 1254 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
BdnfP21237 Utp23-201ENSMUST00000059599 740 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
BdnfP21237 Gm10131-201ENSMUST00000080152 736 ntAPPRIS P1 BASIC11.69□□□□□ -0.54
BdnfP21237 Hist1h2ah-201ENSMUST00000091742 405 ntAPPRIS P1 BASIC11.69□□□□□ -0.54
BdnfP21237 Gm37849-201ENSMUST00000194722 1881 ntBASIC11.69□□□□□ -0.54
BdnfP21237 CT025681.1-201ENSMUST00000225453 1855 ntBASIC11.69□□□□□ -0.54
BdnfP21237 Zcchc11-202ENSMUST00000097925 5865 ntAPPRIS ALT2 TSL 5 BASIC11.69□□□□□ -0.54
BdnfP21237 Rtl5-204ENSMUST00000188731 4325 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
BdnfP21237 Rin2-202ENSMUST00000110005 4641 ntAPPRIS ALT2 TSL 5 BASIC11.69□□□□□ -0.54
BdnfP21237 Sertm1-201ENSMUST00000070342 3083 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
BdnfP21237 Arhgap4-201ENSMUST00000064376 3353 ntAPPRIS P3 TSL 1 (best) BASIC11.69□□□□□ -0.54
BdnfP21237 Abcb9-201ENSMUST00000031354 3661 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
BdnfP21237 Arhgap35-202ENSMUST00000171937 6251 ntAPPRIS P1 TSL 5 BASIC11.69□□□□□ -0.54
BdnfP21237 Tunar-201ENSMUST00000180458 3282 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
BdnfP21237 Aldh1a7-201ENSMUST00000025656 2066 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
BdnfP21237 Kcnq3-201ENSMUST00000070256 11824 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
BdnfP21237 Cyp2j13-203ENSMUST00000107078 1493 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
BdnfP21237 C2-201ENSMUST00000025230 2641 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
BdnfP21237 Epha5-206ENSMUST00000113406 4606 ntAPPRIS ALT2 TSL 5 BASIC11.69□□□□□ -0.54
BdnfP21237 Cdh20-201ENSMUST00000062528 4012 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
BdnfP21237 Wif1-201ENSMUST00000020439 2294 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
BdnfP21237 Slc46a2-201ENSMUST00000030081 2833 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
BdnfP21237 Fn3krp-201ENSMUST00000038096 2520 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
BdnfP21237 Tmc4-202ENSMUST00000121743 2204 ntAPPRIS ALT2 TSL 1 (best) BASIC11.68□□□□□ -0.54
BdnfP21237 Pygo1-201ENSMUST00000038489 7916 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
BdnfP21237 Plrg1-202ENSMUST00000122128 1608 ntTSL 5 BASIC11.68□□□□□ -0.54
BdnfP21237 BC017643-201ENSMUST00000038709 2417 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
BdnfP21237 Gm5106-201ENSMUST00000181058 1334 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
BdnfP21237 Kdm5c-201ENSMUST00000082177 5520 ntAPPRIS ALT2 TSL 5 BASIC11.68□□□□□ -0.54
BdnfP21237 Fbxo44-208ENSMUST00000167160 1572 ntAPPRIS P1 TSL 5 BASIC11.68□□□□□ -0.54
BdnfP21237 Ggt6-201ENSMUST00000076443 1818 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
BdnfP21237 Kcnj11-205ENSMUST00000211674 3142 ntAPPRIS P1 BASIC11.68□□□□□ -0.54
BdnfP21237 Mast1-201ENSMUST00000109741 4872 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
BdnfP21237 Atp5d-202ENSMUST00000105366 781 ntTSL 2 BASIC11.68□□□□□ -0.54
BdnfP21237 Nr2f1-203ENSMUST00000127137 991 ntTSL 5 BASIC11.68□□□□□ -0.54
BdnfP21237 Pelp1-202ENSMUST00000135148 562 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
BdnfP21237 Psme1-202ENSMUST00000172738 681 ntTSL 5 BASIC11.68□□□□□ -0.54
BdnfP21237 C87198-201ENSMUST00000173553 1045 ntTSL 3 BASIC11.68□□□□□ -0.54
BdnfP21237 1700037F24Rik-201ENSMUST00000181254 973 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
BdnfP21237 Gm8602-201ENSMUST00000184045 607 ntBASIC11.68□□□□□ -0.54
BdnfP21237 Gm38230-201ENSMUST00000193572 1159 ntBASIC11.68□□□□□ -0.54
BdnfP21237 Gm3654-202ENSMUST00000210597 472 ntTSL 3 BASIC11.68□□□□□ -0.54
BdnfP21237 Gm40466-201ENSMUST00000212174 422 ntBASIC11.68□□□□□ -0.54
BdnfP21237 Gm29208-205ENSMUST00000214517 1056 ntTSL 5 BASIC11.68□□□□□ -0.54
BdnfP21237 Cav3-201ENSMUST00000075477 1157 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
BdnfP21237 Gm37827-201ENSMUST00000194486 1542 ntBASIC11.68□□□□□ -0.54
BdnfP21237 Slc6a16-201ENSMUST00000179310 2007 ntAPPRIS ALT2 TSL 5 BASIC11.68□□□□□ -0.54
BdnfP21237 Unc13a-201ENSMUST00000030170 10255 ntAPPRIS P2 TSL 5 BASIC11.68□□□□□ -0.54
BdnfP21237 Pag1-201ENSMUST00000108384 3729 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
BdnfP21237 Trim50-202ENSMUST00000111180 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC11.68□□□□□ -0.54
BdnfP21237 Pfkp-201ENSMUST00000021614 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC11.68□□□□□ -0.54
BdnfP21237 Pcnx3-202ENSMUST00000113615 7264 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
BdnfP21237 Hrc-201ENSMUST00000085351 2411 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
BdnfP21237 Rmi1-201ENSMUST00000042450 3855 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
BdnfP21237 Cdh18-204ENSMUST00000165614 2162 ntTSL 5 BASIC11.68□□□□□ -0.54
BdnfP21237 Arvcf-202ENSMUST00000115610 3829 ntAPPRIS ALT2 TSL 5 BASIC11.68□□□□□ -0.54
BdnfP21237 Nbeal2-211ENSMUST00000196488 8599 ntAPPRIS ALT2 TSL 5 BASIC11.68□□□□□ -0.54
BdnfP21237 Ppip5k1-202ENSMUST00000110625 5226 ntAPPRIS ALT2 TSL 5 BASIC11.68□□□□□ -0.54
BdnfP21237 Tonsl-207ENSMUST00000168185 4235 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
BdnfP21237 Srrt-201ENSMUST00000040873 3024 ntAPPRIS P3 TSL 5 BASIC11.68□□□□□ -0.54
BdnfP21237 Dcaf8-202ENSMUST00000191689 2754 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
BdnfP21237 Rad23a-201ENSMUST00000003911 2074 ntAPPRIS P3 TSL 1 (best) BASIC11.67□□□□□ -0.54
BdnfP21237 Akr1b3-201ENSMUST00000102980 1387 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
BdnfP21237 Gm26826-201ENSMUST00000181317 1395 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
BdnfP21237 Adgre5-208ENSMUST00000166939 2980 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
BdnfP21237 Adgre5-201ENSMUST00000002964 2986 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
BdnfP21237 E330021D16Rik-203ENSMUST00000204830 1813 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
BdnfP21237 Gm42449-201ENSMUST00000200349 2258 ntBASIC11.67□□□□□ -0.54
BdnfP21237 Dysf-216ENSMUST00000204987 6474 ntAPPRIS ALT2 TSL 5 BASIC11.67□□□□□ -0.54
BdnfP21237 Eif4g1-217ENSMUST00000143939 5114 ntAPPRIS ALT2 TSL 5 BASIC11.67□□□□□ -0.54
BdnfP21237 Samd11-204ENSMUST00000218788 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC11.67□□□□□ -0.54
BdnfP21237 Fcer2a-201ENSMUST00000005678 2242 ntAPPRIS P3 TSL 1 (best) BASIC11.67□□□□□ -0.54
BdnfP21237 Bpi-202ENSMUST00000109499 1778 ntAPPRIS ALT2 TSL 1 (best) BASIC11.67□□□□□ -0.54
BdnfP21237 Gm43267-201ENSMUST00000199664 1796 ntBASIC11.67□□□□□ -0.54
BdnfP21237 Armt1-201ENSMUST00000095893 2429 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
BdnfP21237 Vmac-202ENSMUST00000164907 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC11.67□□□□□ -0.54
BdnfP21237 Aplp2-209ENSMUST00000217641 3462 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
BdnfP21237 Snap25-202ENSMUST00000110098 1014 ntAPPRIS ALT1 TSL 3 BASIC11.67□□□□□ -0.54
BdnfP21237 Snrnp27-202ENSMUST00000113683 1005 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
BdnfP21237 Gm4984-201ENSMUST00000115987 360 ntBASIC11.67□□□□□ -0.54
BdnfP21237 Cdkn1a-202ENSMUST00000119901 748 ntAPPRIS P1 TSL 2 BASIC11.67□□□□□ -0.54
BdnfP21237 Mrps17-205ENSMUST00000119985 859 ntAPPRIS P1 TSL 2 BASIC11.67□□□□□ -0.54
BdnfP21237 Ndufaf2-201ENSMUST00000163558 678 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
BdnfP21237 Naa60-209ENSMUST00000175809 279 ntTSL 5 BASIC11.67□□□□□ -0.54
BdnfP21237 Asgr1-201ENSMUST00000018699 1259 ntAPPRIS P3 TSL 1 (best) BASIC11.67□□□□□ -0.54
BdnfP21237 Mrpl30-205ENSMUST00000193673 662 ntAPPRIS P1 TSL 2 BASIC11.67□□□□□ -0.54
BdnfP21237 Gm31597-201ENSMUST00000211176 515 ntTSL 2 BASIC11.67□□□□□ -0.54
BdnfP21237 Atp6v0c-201ENSMUST00000024932 1183 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
BdnfP21237 Bst2-201ENSMUST00000051672 792 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
BdnfP21237 Rpl18a-201ENSMUST00000054220 1260 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
BdnfP21237 Olfr91-201ENSMUST00000087144 939 ntAPPRIS P1 BASIC11.67□□□□□ -0.54
BdnfP21237 B230118H07Rik-202ENSMUST00000099682 895 ntAPPRIS ALT2 TSL 5 BASIC11.67□□□□□ -0.54
BdnfP21237 Tirap-203ENSMUST00000176531 2310 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
BdnfP21237 Tpra1-219ENSMUST00000203345 3359 ntTSL 5 BASIC11.67□□□□□ -0.54
BdnfP21237 Ttll3-206ENSMUST00000204026 1472 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Retrieved 100 of 76,532 protein–RNA pairs in 48.8 ms