Protein–RNA interactions for Protein: P18181

Cd48, CD48 antigen, mousemouse

Predictions only

Length 240 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cd48P18181 Wdr20rt-201ENSMUST00000046331 2228 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Cd48P18181 Shtn1-201ENSMUST00000047511 4081 ntAPPRIS P4 TSL 1 (best) BASIC10.91□□□□□ -0.66
Cd48P18181 1110051M20Rik-203ENSMUST00000102594 1977 ntAPPRIS P3 TSL 1 (best) BASIC10.91□□□□□ -0.66
Cd48P18181 Fam118b-203ENSMUST00000121564 1962 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Cd48P18181 Elovl1-203ENSMUST00000102673 1248 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Cd48P18181 Pnpo-202ENSMUST00000107629 681 ntTSL 3 BASIC10.91□□□□□ -0.66
Cd48P18181 Ice2-203ENSMUST00000117610 800 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Cd48P18181 Gm13315-201ENSMUST00000120376 991 ntBASIC10.91□□□□□ -0.66
Cd48P18181 Snhg20-201ENSMUST00000145438 459 ntTSL 3 BASIC10.91□□□□□ -0.66
Cd48P18181 4932443L11Rik-201ENSMUST00000148353 414 ntTSL 5 BASIC10.91□□□□□ -0.66
Cd48P18181 Asgr1-201ENSMUST00000018699 1259 ntAPPRIS P3 TSL 1 (best) BASIC10.91□□□□□ -0.66
Cd48P18181 Gm4034-201ENSMUST00000187674 480 ntBASIC10.91□□□□□ -0.66
Cd48P18181 Gm18304-201ENSMUST00000189162 546 ntBASIC10.91□□□□□ -0.66
Cd48P18181 Tnfrsf19-205ENSMUST00000225730 744 ntAPPRIS ALT2 BASIC10.91□□□□□ -0.66
Cd48P18181 Mrto4-201ENSMUST00000030513 930 ntAPPRIS P3 TSL 1 (best) BASIC10.91□□□□□ -0.66
Cd48P18181 U2af1l4-201ENSMUST00000043273 884 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Cd48P18181 Gps2-201ENSMUST00000057884 1220 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Cd48P18181 Fam241b-202ENSMUST00000064050 1096 ntAPPRIS P1 TSL 5 BASIC10.91□□□□□ -0.66
Cd48P18181 Cav3-201ENSMUST00000075477 1157 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Cd48P18181 Cmklr1-201ENSMUST00000047936 2882 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Cd48P18181 Acad8-201ENSMUST00000060513 2859 ntAPPRIS P2 TSL 1 (best) BASIC10.91□□□□□ -0.66
Cd48P18181 Adck1-202ENSMUST00000166940 2199 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Cd48P18181 Gm5884-201ENSMUST00000036712 1479 ntBASIC10.91□□□□□ -0.66
Cd48P18181 Ttc23-202ENSMUST00000107470 1915 ntAPPRIS ALT2 TSL 5 BASIC10.91□□□□□ -0.66
Cd48P18181 Chtop-201ENSMUST00000001043 3257 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Cd48P18181 Kcnip4-207ENSMUST00000176191 2116 ntTSL 5 BASIC10.91□□□□□ -0.66
Cd48P18181 Vamp1-201ENSMUST00000032487 2772 ntAPPRIS P3 TSL 1 (best) BASIC10.91□□□□□ -0.66
Cd48P18181 Entpd8-203ENSMUST00000114380 2301 ntAPPRIS P2 TSL 1 (best) BASIC10.91□□□□□ -0.66
Cd48P18181 Gucy2e-203ENSMUST00000108665 3645 ntAPPRIS P1 TSL 5 BASIC10.91□□□□□ -0.66
Cd48P18181 Opn1sw-203ENSMUST00000147483 1426 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Cd48P18181 Rdh8-201ENSMUST00000066387 1405 ntAPPRIS P1 TSL 2 BASIC10.91□□□□□ -0.66
Cd48P18181 Serpina11-201ENSMUST00000074693 1447 ntAPPRIS P3 TSL 1 (best) BASIC10.91□□□□□ -0.66
Cd48P18181 Zfand2a-202ENSMUST00000110851 3121 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Cd48P18181 1200007C13Rik-201ENSMUST00000143649 2455 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Cd48P18181 BC067074-203ENSMUST00000136755 8274 ntAPPRIS P1 TSL 5 BASIC10.91□□□□□ -0.66
Cd48P18181 Pdlim5-206ENSMUST00000195975 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC10.91□□□□□ -0.66
Cd48P18181 Pafah2-201ENSMUST00000105869 2248 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Cd48P18181 Ppp2r5c-204ENSMUST00000221074 1971 ntTSL 5 BASIC10.9□□□□□ -0.66
Cd48P18181 Zfp710-202ENSMUST00000164056 5871 ntAPPRIS P4 TSL 1 (best) BASIC10.9□□□□□ -0.66
Cd48P18181 Togaram1-207ENSMUST00000223166 6386 ntAPPRIS ALT2 TSL 1 (best) BASIC10.9□□□□□ -0.66
Cd48P18181 Mfap3l-203ENSMUST00000161421 4142 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Cd48P18181 Gucy1a3-204ENSMUST00000193924 4710 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Cd48P18181 Dlg4-203ENSMUST00000108588 3457 ntAPPRIS ALT1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Cd48P18181 Fgf12-201ENSMUST00000100024 3065 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Cd48P18181 Slurp1-202ENSMUST00000190433 2859 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Cd48P18181 Hnrnpf-209ENSMUST00000180020 2280 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Cd48P18181 Tubd1-201ENSMUST00000020821 2070 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Cd48P18181 Acsm1-201ENSMUST00000047929 2083 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Cd48P18181 Gm12390-201ENSMUST00000117897 397 ntBASIC10.9□□□□□ -0.66
Cd48P18181 Msrb3-202ENSMUST00000130950 561 ntTSL 3 BASIC10.9□□□□□ -0.66
Cd48P18181 Gm16191-202ENSMUST00000148464 484 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Cd48P18181 Shisa5-203ENSMUST00000154184 1038 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Cd48P18181 2010320O07Rik-201ENSMUST00000160935 525 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Cd48P18181 Pitx2-204ENSMUST00000172645 915 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Cd48P18181 Gm25927-201ENSMUST00000175058 117 ntBASIC10.9□□□□□ -0.66
Cd48P18181 Ssr2-202ENSMUST00000192495 620 ntTSL 5 BASIC10.9□□□□□ -0.66
Cd48P18181 Mrpl30-205ENSMUST00000193673 662 ntAPPRIS P1 TSL 2 BASIC10.9□□□□□ -0.66
Cd48P18181 Fgfr3-ps-201ENSMUST00000195511 1137 ntBASIC10.9□□□□□ -0.66
Cd48P18181 Sox2ot-207ENSMUST00000196987 727 ntTSL 3 BASIC10.9□□□□□ -0.66
Cd48P18181 Gm44170-201ENSMUST00000203181 549 ntTSL 5 BASIC10.9□□□□□ -0.66
Cd48P18181 Gm31597-201ENSMUST00000211176 515 ntTSL 2 BASIC10.9□□□□□ -0.66
Cd48P18181 Slc35d2-202ENSMUST00000220792 917 ntAPPRIS ALT2 TSL 1 (best) BASIC10.9□□□□□ -0.66
Cd48P18181 Gm10076-201ENSMUST00000073238 384 ntBASIC10.9□□□□□ -0.66
Cd48P18181 Gm11559-201ENSMUST00000092694 1096 ntAPPRIS P1 BASIC10.9□□□□□ -0.66
Cd48P18181 Dnm3-202ENSMUST00000086074 7523 ntAPPRIS ALT2 TSL 5 BASIC10.9□□□□□ -0.66
Cd48P18181 Tmcc3-204ENSMUST00000121471 2614 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Cd48P18181 3830432H09Rik-202ENSMUST00000188909 2414 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Cd48P18181 Mrpl45-201ENSMUST00000019026 2431 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Cd48P18181 Slc6a5-201ENSMUST00000056442 7065 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Cd48P18181 Cdc7-201ENSMUST00000031221 2961 ntAPPRIS P3 TSL 1 (best) BASIC10.9□□□□□ -0.66
Cd48P18181 Tex9-209ENSMUST00000184125 2794 ntAPPRIS P2 TSL 1 (best) BASIC10.9□□□□□ -0.66
Cd48P18181 Ldhal6b-201ENSMUST00000189788 1445 ntAPPRIS P1 BASIC10.9□□□□□ -0.66
Cd48P18181 4933421I07Rik-201ENSMUST00000032648 1413 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Cd48P18181 Auts2-209ENSMUST00000161804 5392 ntAPPRIS P5 TSL 1 (best) BASIC10.9□□□□□ -0.66
Cd48P18181 B230398E01Rik-201ENSMUST00000125186 1958 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Cd48P18181 Mfsd4a-207ENSMUST00000159038 1957 ntAPPRIS P2 TSL 5 BASIC10.9□□□□□ -0.66
Cd48P18181 AC159314.1-201ENSMUST00000216917 3485 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Cd48P18181 Atp6v0a1-201ENSMUST00000044721 4008 ntAPPRIS P2 TSL 1 (best) BASIC10.9□□□□□ -0.67
Cd48P18181 Klhl14-201ENSMUST00000049105 4018 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.67
Cd48P18181 Fnbp1-202ENSMUST00000075326 1761 ntTSL 5 BASIC10.9□□□□□ -0.67
Cd48P18181 Rab14-201ENSMUST00000028238 3081 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.67
Cd48P18181 Cyp4f39-201ENSMUST00000003413 1599 ntAPPRIS P1 TSL 5 BASIC10.9□□□□□ -0.67
Cd48P18181 Cbl-211ENSMUST00000206720 11372 ntAPPRIS P2 TSL 1 (best) BASIC10.9□□□□□ -0.67
Cd48P18181 Gm13127-201ENSMUST00000118978 1389 ntBASIC10.9□□□□□ -0.67
Cd48P18181 Neat1-202ENSMUST00000174287 3004 ntTSL 1 (best) BASIC10.9□□□□□ -0.67
Cd48P18181 Hdac6-201ENSMUST00000033501 4142 ntAPPRIS P1 TSL 5 BASIC10.9□□□□□ -0.67
Cd48P18181 Gm37542-201ENSMUST00000192563 2832 ntBASIC10.9□□□□□ -0.67
Cd48P18181 Xkr5-201ENSMUST00000055503 3176 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Cd48P18181 Tubgcp2-201ENSMUST00000026547 2960 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Cd48P18181 4933436I20Rik-202ENSMUST00000190615 1509 ntTSL 5 BASIC10.89□□□□□ -0.67
Cd48P18181 Tmbim1-202ENSMUST00000113796 11011 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Cd48P18181 Dnmt3c-201ENSMUST00000119996 2223 ntAPPRIS P1 BASIC10.89□□□□□ -0.67
Cd48P18181 Tfdp2-204ENSMUST00000179065 2213 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Cd48P18181 Slc37a1-202ENSMUST00000171233 2929 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Cd48P18181 Stat5a-203ENSMUST00000107357 3605 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Cd48P18181 Dusp13-202ENSMUST00000119866 1342 ntTSL 5 BASIC10.89□□□□□ -0.67
Cd48P18181 Gm5106-201ENSMUST00000181058 1334 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Cd48P18181 Gm16083-201ENSMUST00000125681 2547 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Cd48P18181 4833439L19Rik-208ENSMUST00000153065 2502 ntTSL 5 BASIC10.89□□□□□ -0.67
Cd48P18181 Taok1-202ENSMUST00000058496 12409 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Retrieved 100 of 76,532 protein–RNA pairs in 49.8 ms