Protein–RNA interactions for Protein: P13297

Msx1, Homeobox protein MSX-1, mousemouse

Predictions only

Length 303 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msx1P13297 Sgsm1-203ENSMUST00000112324 1102 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Msx1P13297 Ctcflos-203ENSMUST00000144256 1237 ntTSL 5 BASIC11.74□□□□□ -0.53
Msx1P13297 Gm11290-203ENSMUST00000147811 314 ntTSL 5 BASIC11.74□□□□□ -0.53
Msx1P13297 Dnajc25-204ENSMUST00000152199 1141 ntTSL 5 BASIC11.74□□□□□ -0.53
Msx1P13297 Gm454-201ENSMUST00000160126 751 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Msx1P13297 Gm3625-201ENSMUST00000170816 102 ntAPPRIS P1 BASIC11.74□□□□□ -0.53
Msx1P13297 Gm6309-201ENSMUST00000174320 1154 ntAPPRIS P1 TSL 5 BASIC11.74□□□□□ -0.53
Msx1P13297 Gm28139-201ENSMUST00000189480 643 ntTSL 5 BASIC11.74□□□□□ -0.53
Msx1P13297 9430037O13Rik-201ENSMUST00000192556 1008 ntBASIC11.74□□□□□ -0.53
Msx1P13297 Gm20177-201ENSMUST00000203705 334 ntBASIC11.74□□□□□ -0.53
Msx1P13297 Gm44100-201ENSMUST00000204329 436 ntBASIC11.74□□□□□ -0.53
Msx1P13297 Gm18871-201ENSMUST00000218655 745 ntBASIC11.74□□□□□ -0.53
Msx1P13297 AC132384.6-201ENSMUST00000218976 1206 ntBASIC11.74□□□□□ -0.53
Msx1P13297 Gm18556-201ENSMUST00000219748 1031 ntBASIC11.74□□□□□ -0.53
Msx1P13297 AC156572.1-201ENSMUST00000221040 1161 ntTSL 5 BASIC11.74□□□□□ -0.53
Msx1P13297 AC160962.2-201ENSMUST00000224761 632 ntBASIC11.74□□□□□ -0.53
Msx1P13297 Gm14267-206ENSMUST00000226870 1209 ntBASIC11.74□□□□□ -0.53
Msx1P13297 AC154683.1-201ENSMUST00000228409 1284 ntBASIC11.74□□□□□ -0.53
Msx1P13297 Pxt1-201ENSMUST00000051526 710 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Msx1P13297 Prr15l-202ENSMUST00000062172 1242 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Msx1P13297 Rpl18-201ENSMUST00000072503 679 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Msx1P13297 Tnnt3-201ENSMUST00000074187 1007 ntAPPRIS P3 TSL 1 (best) BASIC11.74□□□□□ -0.53
Msx1P13297 Olfr1076-201ENSMUST00000076263 942 ntAPPRIS P1 BASIC11.74□□□□□ -0.53
Msx1P13297 Tmem56-204ENSMUST00000135818 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Msx1P13297 Trim29-201ENSMUST00000034511 2735 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Msx1P13297 Chrna3-201ENSMUST00000034851 4358 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Msx1P13297 Tfap2c-202ENSMUST00000099058 2985 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Msx1P13297 Spock1-206ENSMUST00000189373 3128 ntTSL 5 BASIC11.74□□□□□ -0.53
Msx1P13297 Frzb-201ENSMUST00000028389 3149 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Msx1P13297 Adam19-201ENSMUST00000011400 6383 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Msx1P13297 AI661453-202ENSMUST00000150819 4866 ntAPPRIS P2 TSL 5 BASIC11.74□□□□□ -0.53
Msx1P13297 Adora1-202ENSMUST00000086465 4968 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Msx1P13297 Kcne2-201ENSMUST00000047383 1690 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Msx1P13297 Nmt2-202ENSMUST00000091504 1676 ntTSL 5 BASIC11.74□□□□□ -0.53
Msx1P13297 Abra-201ENSMUST00000054742 1762 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Msx1P13297 Cflar-202ENSMUST00000097722 1771 ntAPPRIS ALT2 TSL 5 BASIC11.74□□□□□ -0.53
Msx1P13297 Map3k2-201ENSMUST00000096575 10791 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Msx1P13297 Asl-202ENSMUST00000159619 2088 ntAPPRIS P1 TSL 5 BASIC11.74□□□□□ -0.53
Msx1P13297 Fbxl12-203ENSMUST00000131128 4182 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Msx1P13297 C030034I22Rik-202ENSMUST00000188481 4231 ntBASIC11.74□□□□□ -0.53
Msx1P13297 Tmem39a-201ENSMUST00000002924 2871 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Msx1P13297 Zbtb20-205ENSMUST00000114695 2977 ntAPPRIS P3 TSL 1 (best) BASIC11.73□□□□□ -0.53
Msx1P13297 Slc26a5-201ENSMUST00000030878 2962 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Msx1P13297 Prpf19-203ENSMUST00000179297 6035 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Msx1P13297 Plekhd1-201ENSMUST00000140770 3535 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Msx1P13297 Lin28a-201ENSMUST00000051674 3505 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Msx1P13297 Gdf6-201ENSMUST00000057613 3532 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Msx1P13297 Tmem201-203ENSMUST00000105687 3697 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Msx1P13297 Phf24-202ENSMUST00000107975 6494 ntAPPRIS P1 TSL 2 BASIC11.73□□□□□ -0.53
Msx1P13297 Park7-202ENSMUST00000105673 919 ntAPPRIS P1 TSL 5 BASIC11.73□□□□□ -0.53
Msx1P13297 Adh6a-202ENSMUST00000106247 1341 ntAPPRIS P2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Msx1P13297 Gm11595-201ENSMUST00000107440 1200 ntAPPRIS P1 BASIC11.73□□□□□ -0.53
Msx1P13297 Prox1os-201ENSMUST00000110279 828 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Msx1P13297 Gltp-202ENSMUST00000112212 799 ntTSL 5 BASIC11.73□□□□□ -0.53
Msx1P13297 Ppm1b-204ENSMUST00000112307 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Msx1P13297 2310040G07Rik-202ENSMUST00000145897 462 ntTSL 3 BASIC11.73□□□□□ -0.53
Msx1P13297 Gm16296-201ENSMUST00000159905 325 ntBASIC11.73□□□□□ -0.53
Msx1P13297 U2af1l4-206ENSMUST00000163654 781 ntTSL 2 BASIC11.73□□□□□ -0.53
Msx1P13297 Igdcc4-203ENSMUST00000166273 778 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Msx1P13297 U2af1l4-221ENSMUST00000167361 860 ntTSL 2 BASIC11.73□□□□□ -0.53
Msx1P13297 Iqcf6-201ENSMUST00000171091 537 ntAPPRIS P1 TSL 5 BASIC11.73□□□□□ -0.53
Msx1P13297 Gm25700-201ENSMUST00000177693 110 ntBASIC11.73□□□□□ -0.53
Msx1P13297 Gm28411-201ENSMUST00000189864 341 ntTSL 3 BASIC11.73□□□□□ -0.53
Msx1P13297 Gm8228-201ENSMUST00000189949 2192 ntBASIC11.73□□□□□ -0.53
Msx1P13297 1700031P21Rik-203ENSMUST00000191400 466 ntTSL 3 BASIC11.73□□□□□ -0.53
Msx1P13297 Gm38139-201ENSMUST00000195806 704 ntTSL 2 BASIC11.73□□□□□ -0.53
Msx1P13297 Gm42995-201ENSMUST00000197047 1330 ntBASIC11.73□□□□□ -0.53
Msx1P13297 Gm42696-201ENSMUST00000199859 1142 ntBASIC11.73□□□□□ -0.53
Msx1P13297 4930557J02Rik-201ENSMUST00000202325 1075 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Msx1P13297 Olfr886-ps1-201ENSMUST00000212395 708 ntBASIC11.73□□□□□ -0.53
Msx1P13297 AC110091.1-201ENSMUST00000216004 691 ntTSL 3 BASIC11.73□□□□□ -0.53
Msx1P13297 AC154765.1-201ENSMUST00000217732 439 ntTSL 3 BASIC11.73□□□□□ -0.53
Msx1P13297 AC122539.3-201ENSMUST00000218355 1431 ntBASIC11.73□□□□□ -0.53
Msx1P13297 AC151904.4-201ENSMUST00000219868 1319 ntBASIC11.73□□□□□ -0.53
Msx1P13297 AC123665.1-201ENSMUST00000228204 438 ntBASIC11.73□□□□□ -0.53
Msx1P13297 Il2rg-201ENSMUST00000033664 1670 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Msx1P13297 Prss34-201ENSMUST00000037453 1216 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Msx1P13297 Tmem247-201ENSMUST00000042172 752 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Msx1P13297 Olfr1260-201ENSMUST00000061830 933 ntAPPRIS P1 BASIC11.73□□□□□ -0.53
Msx1P13297 Olfr450-201ENSMUST00000067503 933 ntAPPRIS P1 BASIC11.73□□□□□ -0.53
Msx1P13297 Pepd-201ENSMUST00000075068 1881 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Msx1P13297 Nsmce2-201ENSMUST00000079703 1054 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Msx1P13297 Gm815-201ENSMUST00000099536 610 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Msx1P13297 Eif2ak1-201ENSMUST00000100487 4325 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Msx1P13297 Xkr8-201ENSMUST00000045550 4245 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Msx1P13297 Pygm-201ENSMUST00000035269 2874 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Msx1P13297 Gm14123-201ENSMUST00000156345 2658 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Msx1P13297 Dync1i1-204ENSMUST00000115559 2599 ntAPPRIS P3 TSL 1 (best) BASIC11.73□□□□□ -0.53
Msx1P13297 Stx3-203ENSMUST00000075304 2430 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Msx1P13297 Syncrip-210ENSMUST00000174391 6257 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Msx1P13297 Comt-204ENSMUST00000165430 1978 ntAPPRIS P1 TSL 5 BASIC11.72□□□□□ -0.53
Msx1P13297 Glo1-201ENSMUST00000024823 1935 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Msx1P13297 Adi1-201ENSMUST00000020957 1652 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Msx1P13297 Dnmt3l-201ENSMUST00000000746 1676 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Msx1P13297 Slc25a25-201ENSMUST00000028160 3294 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Msx1P13297 Gm37737-201ENSMUST00000195013 1638 ntBASIC11.72□□□□□ -0.53
Msx1P13297 C530044C16Rik-201ENSMUST00000204275 1624 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Msx1P13297 Abca3-201ENSMUST00000039013 6476 ntAPPRIS P2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Msx1P13297 Nrsn2-201ENSMUST00000079278 1455 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Msx1P13297 Rai1-207ENSMUST00000171108 7125 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Retrieved 100 of 76,532 protein–RNA pairs in 35.4 ms