Protein–RNA interactions for Protein: P12850

Cxcl1, Growth-regulated alpha protein, mousemouse

Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cxcl1P12850 Sh3tc1-201ENSMUST00000070203 4549 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Cxcl1P12850 Bpi-201ENSMUST00000065039 1926 ntAPPRIS P2 TSL 1 (best) BASIC10.05□□□□□ -0.8
Cxcl1P12850 Hoxc5-201ENSMUST00000001709 2923 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Cxcl1P12850 Zmynd8-220ENSMUST00000170272 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC10.05□□□□□ -0.8
Cxcl1P12850 Arvcf-202ENSMUST00000115610 3829 ntAPPRIS ALT2 TSL 5 BASIC10.05□□□□□ -0.8
Cxcl1P12850 Tfr2-204ENSMUST00000196471 2839 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Cxcl1P12850 Gm45677-201ENSMUST00000209975 1341 ntBASIC10.05□□□□□ -0.8
Cxcl1P12850 Nrg1-202ENSMUST00000207417 3138 ntAPPRIS ALT2 TSL 5 BASIC10.05□□□□□ -0.8
Cxcl1P12850 Lins1-202ENSMUST00000077967 2647 ntAPPRIS ALT2 TSL 2 BASIC10.04□□□□□ -0.8
Cxcl1P12850 Ifnar1-201ENSMUST00000023689 3909 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Cxcl1P12850 Gdap2-201ENSMUST00000029459 3008 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Cxcl1P12850 Il21r-202ENSMUST00000206103 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC10.04□□□□□ -0.8
Cxcl1P12850 Cacna1c-203ENSMUST00000112790 7631 ntAPPRIS ALT2 TSL 1 (best) BASIC10.04□□□□□ -0.8
Cxcl1P12850 Adgrg5-201ENSMUST00000074570 2802 ntAPPRIS P3 TSL 1 (best) BASIC10.04□□□□□ -0.8
Cxcl1P12850 Rapgef6-202ENSMUST00000101206 5864 ntAPPRIS ALT2 TSL 5 BASIC10.04□□□□□ -0.8
Cxcl1P12850 Gnb1l-204ENSMUST00000115601 3507 ntAPPRIS ALT2 TSL 1 (best) BASIC10.04□□□□□ -0.8
Cxcl1P12850 Src-201ENSMUST00000029175 3906 ntAPPRIS P1 TSL 5 BASIC10.04□□□□□ -0.8
Cxcl1P12850 Gfi1b-201ENSMUST00000028156 1681 ntAPPRIS P3 TSL 1 (best) BASIC10.04□□□□□ -0.8
Cxcl1P12850 Lcn5-202ENSMUST00000100312 660 ntAPPRIS ALT2 TSL 1 (best) BASIC10.04□□□□□ -0.8
Cxcl1P12850 Tmem53-203ENSMUST00000106434 923 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
Cxcl1P12850 Isg20-204ENSMUST00000121645 1087 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
Cxcl1P12850 Mpc1-202ENSMUST00000124023 555 ntTSL 2 BASIC10.04□□□□□ -0.8
Cxcl1P12850 Gm14230-202ENSMUST00000137463 874 ntTSL 2 BASIC10.04□□□□□ -0.8
Cxcl1P12850 Lats2-207ENSMUST00000173990 3834 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
Cxcl1P12850 Gm26721-201ENSMUST00000181723 992 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
Cxcl1P12850 2010310C07Rik-202ENSMUST00000190889 842 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
Cxcl1P12850 Gm42442-201ENSMUST00000197951 1133 ntBASIC10.04□□□□□ -0.8
Cxcl1P12850 Gm18584-201ENSMUST00000203098 964 ntBASIC10.04□□□□□ -0.8
Cxcl1P12850 Dera-204ENSMUST00000203216 688 ntTSL 5 BASIC10.04□□□□□ -0.8
Cxcl1P12850 Gm31816-201ENSMUST00000209388 1294 ntTSL 5 BASIC10.04□□□□□ -0.8
Cxcl1P12850 Gm39404-201ENSMUST00000216350 313 ntBASIC10.04□□□□□ -0.8
Cxcl1P12850 Lsm7-208ENSMUST00000220225 1129 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
Cxcl1P12850 Ifitm3-201ENSMUST00000026565 678 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Cxcl1P12850 Gm10268-201ENSMUST00000085340 555 ntBASIC10.04□□□□□ -0.8
Cxcl1P12850 Zfp112-204ENSMUST00000215113 2628 ntAPPRIS ALT2 TSL 5 BASIC10.04□□□□□ -0.8
Cxcl1P12850 Fcer2a-201ENSMUST00000005678 2242 ntAPPRIS P3 TSL 1 (best) BASIC10.04□□□□□ -0.8
Cxcl1P12850 Sorcs1-203ENSMUST00000164039 7241 ntAPPRIS ALT1 TSL 5 BASIC10.04□□□□□ -0.8
Cxcl1P12850 Pdlim5-206ENSMUST00000195975 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC10.04□□□□□ -0.8
Cxcl1P12850 Emp1-202ENSMUST00000111907 2763 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Cxcl1P12850 Adgrl3-214ENSMUST00000120445 5230 ntTSL 5 BASIC10.04□□□□□ -0.8
Cxcl1P12850 Hoxa9-201ENSMUST00000048680 3226 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Cxcl1P12850 Ints1-210ENSMUST00000200393 7070 ntAPPRIS P2 TSL 1 (best) BASIC10.04□□□□□ -0.8
Cxcl1P12850 Ocln-201ENSMUST00000022140 2839 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Cxcl1P12850 Gnb1l-202ENSMUST00000090086 3549 ntAPPRIS P3 TSL 1 (best) BASIC10.04□□□□□ -0.8
Cxcl1P12850 Folr1-204ENSMUST00000106985 1313 ntAPPRIS P1 TSL 5 BASIC10.04□□□□□ -0.8
Cxcl1P12850 Mxd3-201ENSMUST00000021941 1327 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Cxcl1P12850 Stra6-202ENSMUST00000085677 2725 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Cxcl1P12850 Rragd-202ENSMUST00000084747 4295 ntTSL 5 BASIC10.04□□□□□ -0.8
Cxcl1P12850 Pla2g6-206ENSMUST00000173163 3018 ntTSL 5 BASIC10.04□□□□□ -0.8
Cxcl1P12850 Frmpd2-203ENSMUST00000208577 5192 ntAPPRIS P1 TSL 5 BASIC10.03□□□□□ -0.8
Cxcl1P12850 Slc2a4-203ENSMUST00000141837 1776 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
Cxcl1P12850 Tbx10-201ENSMUST00000041871 1777 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Cxcl1P12850 Cdc14a-201ENSMUST00000090464 4485 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Cxcl1P12850 Adamts14-202ENSMUST00000120336 3645 ntAPPRIS ALT2 TSL 5 BASIC10.03□□□□□ -0.8
Cxcl1P12850 Fggy-201ENSMUST00000043335 1910 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
Cxcl1P12850 Pde4c-207ENSMUST00000224874 3099 ntAPPRIS ALT2 BASIC10.03□□□□□ -0.8
Cxcl1P12850 Lcp2-202ENSMUST00000109329 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC10.03□□□□□ -0.8
Cxcl1P12850 Gm38194-201ENSMUST00000194529 2211 ntBASIC10.03□□□□□ -0.8
Cxcl1P12850 Cacna1g-210ENSMUST00000107792 7981 ntAPPRIS ALT2 TSL 5 BASIC10.03□□□□□ -0.8
Cxcl1P12850 Mapk8ip3-204ENSMUST00000117509 5418 ntAPPRIS ALT2 TSL 1 (best) BASIC10.03□□□□□ -0.8
Cxcl1P12850 Hyal3-202ENSMUST00000148440 1380 ntAPPRIS P1 TSL 5 BASIC10.03□□□□□ -0.8
Cxcl1P12850 Tmem269-202ENSMUST00000212054 1504 ntAPPRIS P2 TSL 1 (best) BASIC10.03□□□□□ -0.8
Cxcl1P12850 Styxl1-208ENSMUST00000178515 1651 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
Cxcl1P12850 Rit2-203ENSMUST00000153060 1806 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Cxcl1P12850 March7-202ENSMUST00000102747 2271 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Cxcl1P12850 E430018J23Rik-203ENSMUST00000165495 3324 ntAPPRIS P1 TSL 2 BASIC10.03□□□□□ -0.8
Cxcl1P12850 Pros1-201ENSMUST00000023629 3303 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Cxcl1P12850 Sema4c-208ENSMUST00000195620 3640 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Cxcl1P12850 Mul1-203ENSMUST00000105815 473 ntTSL 3 BASIC10.03□□□□□ -0.8
Cxcl1P12850 Rhbdl2-202ENSMUST00000106204 1120 ntAPPRIS P1 TSL 5 BASIC10.03□□□□□ -0.8
Cxcl1P12850 A430060F13Rik-201ENSMUST00000124176 378 ntBASIC10.03□□□□□ -0.8
Cxcl1P12850 Pelp1-202ENSMUST00000135148 562 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
Cxcl1P12850 Gm21319-201ENSMUST00000164517 1863 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Cxcl1P12850 Fbxo44-208ENSMUST00000167160 1572 ntAPPRIS P1 TSL 5 BASIC10.03□□□□□ -0.8
Cxcl1P12850 4833427G06Rik-201ENSMUST00000170947 973 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Cxcl1P12850 AA465934-202ENSMUST00000176545 356 ntTSL 2 BASIC10.03□□□□□ -0.8
Cxcl1P12850 Gm8494-201ENSMUST00000178171 1233 ntBASIC10.03□□□□□ -0.8
Cxcl1P12850 Gm9002-201ENSMUST00000178437 499 ntBASIC10.03□□□□□ -0.8
Cxcl1P12850 1700065I16Rik-202ENSMUST00000185477 813 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
Cxcl1P12850 Gm6745-201ENSMUST00000199216 526 ntBASIC10.03□□□□□ -0.8
Cxcl1P12850 Acsf3-202ENSMUST00000212781 2604 ntAPPRIS ALT2 TSL 2 BASIC10.03□□□□□ -0.8
Cxcl1P12850 Chd3os-203ENSMUST00000218008 1026 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
Cxcl1P12850 Tyms-ps-201ENSMUST00000219550 915 ntBASIC10.03□□□□□ -0.8
Cxcl1P12850 Rps15-201ENSMUST00000062674 572 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
Cxcl1P12850 Fcho1-201ENSMUST00000093444 3073 ntAPPRIS P1 TSL 5 BASIC10.03□□□□□ -0.8
Cxcl1P12850 Lipo2-201ENSMUST00000147153 3562 ntAPPRIS P1 TSL 5 BASIC10.03□□□□□ -0.8
Cxcl1P12850 Fn3krp-201ENSMUST00000038096 2520 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Cxcl1P12850 Osbp2-201ENSMUST00000070552 4097 ntAPPRIS P3 TSL 5 BASIC10.03□□□□□ -0.8
Cxcl1P12850 Wbp1l-201ENSMUST00000099376 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC10.03□□□□□ -0.8
Cxcl1P12850 Fcrl1-203ENSMUST00000167200 1793 ntAPPRIS ALT2 TSL 1 (best) BASIC10.03□□□□□ -0.8
Cxcl1P12850 Stxbp5l-201ENSMUST00000023526 3344 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
Cxcl1P12850 Aire-216ENSMUST00000156417 1627 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
Cxcl1P12850 Abat-201ENSMUST00000065987 4636 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Cxcl1P12850 Sertm1-201ENSMUST00000070342 3083 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Cxcl1P12850 Dsc2-202ENSMUST00000075214 4508 ntAPPRIS ALT2 TSL 5 BASIC10.03□□□□□ -0.8
Cxcl1P12850 Zc3hc1-210ENSMUST00000152391 1673 ntTSL 5 BASIC10.02□□□□□ -0.8
Cxcl1P12850 Asic5-201ENSMUST00000029641 1657 ntAPPRIS P2 TSL 1 (best) BASIC10.02□□□□□ -0.8
Cxcl1P12850 Pabpc4-204ENSMUST00000106243 3111 ntAPPRIS ALT1 TSL 5 BASIC10.02□□□□□ -0.8
Cxcl1P12850 Csrnp1-204ENSMUST00000215916 2956 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.8
Cxcl1P12850 Lck-201ENSMUST00000067240 2185 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.8
Retrieved 100 of 76,532 protein–RNA pairs in 48.4 ms