Protein–RNA interactions for Protein: P11087

Col1a1, Collagen alpha-1(I) chain, mousemouse

Predictions only

Length 1,453 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col1a1P11087 Loxl2-202ENSMUST00000100420 3042 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Col1a1P11087 Slc19a2-201ENSMUST00000044021 3571 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Col1a1P11087 Exog-201ENSMUST00000035094 3832 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Col1a1P11087 Ttc7-201ENSMUST00000041110 4614 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Col1a1P11087 Celf2-225ENSMUST00000183091 2177 ntTSL 5 BASIC14.07□□□□□ -0.16
Col1a1P11087 Clec11a-201ENSMUST00000004587 2978 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Col1a1P11087 5830411N06Rik-202ENSMUST00000093984 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Col1a1P11087 Plch2-210ENSMUST00000176194 5619 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
Col1a1P11087 Mau2-202ENSMUST00000168013 5323 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
Col1a1P11087 Kcnma1-214ENSMUST00000190044 3747 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Col1a1P11087 Gm43334-201ENSMUST00000197740 1318 ntBASIC14.07□□□□□ -0.16
Col1a1P11087 Tmem26-201ENSMUST00000080995 5048 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Col1a1P11087 Chit1-203ENSMUST00000160060 1580 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Col1a1P11087 Steap3-204ENSMUST00000112643 2873 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Col1a1P11087 Psmc3-201ENSMUST00000002171 1819 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Col1a1P11087 2610301B20Rik-202ENSMUST00000101504 2053 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
Col1a1P11087 Tet3-203ENSMUST00000186548 5944 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Col1a1P11087 Crygc-202ENSMUST00000114064 612 ntAPPRIS ALT1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Col1a1P11087 Gm12218-201ENSMUST00000117666 399 ntBASIC14.06□□□□□ -0.16
Col1a1P11087 Oaz2-ps-201ENSMUST00000121735 537 ntBASIC14.06□□□□□ -0.16
Col1a1P11087 Gm11354-201ENSMUST00000121974 422 ntBASIC14.06□□□□□ -0.16
Col1a1P11087 Asgr1-205ENSMUST00000146411 1188 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
Col1a1P11087 Gm13391-202ENSMUST00000147685 816 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Col1a1P11087 2810403D21Rik-208ENSMUST00000153212 1005 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Col1a1P11087 Gzmc-201ENSMUST00000015585 894 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Col1a1P11087 1810020O05Rik-201ENSMUST00000162547 1047 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Col1a1P11087 Anapc16-203ENSMUST00000182152 847 ntTSL 2 BASIC14.06□□□□□ -0.16
Col1a1P11087 Gm45338-206ENSMUST00000211460 1155 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Col1a1P11087 Gm23105-201ENSMUST00000083719 134 ntBASIC14.06□□□□□ -0.16
Col1a1P11087 Btnl4-201ENSMUST00000065841 1761 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
Col1a1P11087 Polrmt-202ENSMUST00000159016 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Col1a1P11087 Riox2-206ENSMUST00000160571 2244 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Col1a1P11087 Pax6-203ENSMUST00000111082 3116 ntAPPRIS ALT1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Col1a1P11087 Prex1-203ENSMUST00000109246 2386 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Col1a1P11087 Mfn2-203ENSMUST00000105715 4043 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Col1a1P11087 Ano6-201ENSMUST00000071874 4927 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Col1a1P11087 Ap1g1-202ENSMUST00000093157 6899 ntAPPRIS P3 TSL 5 BASIC14.06□□□□□ -0.16
Col1a1P11087 Acat2-201ENSMUST00000007005 2250 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Col1a1P11087 Ccdc162-208ENSMUST00000179614 2739 ntTSL 5 BASIC14.06□□□□□ -0.16
Col1a1P11087 Pex2-206ENSMUST00000195855 1587 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Col1a1P11087 5430419D17Rik-201ENSMUST00000050586 2928 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Col1a1P11087 Slc4a5-201ENSMUST00000039212 5123 ntAPPRIS P2 TSL 5 BASIC14.06□□□□□ -0.16
Col1a1P11087 Ino80c-203ENSMUST00000141489 2207 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Col1a1P11087 Fgfr3-210ENSMUST00000169212 4245 ntAPPRIS P4 TSL 1 (best) BASIC14.06□□□□□ -0.16
Col1a1P11087 Fgfr3-201ENSMUST00000067150 4218 ntAPPRIS P4 TSL 1 (best) BASIC14.06□□□□□ -0.16
Col1a1P11087 Clcn6-201ENSMUST00000030879 3306 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Col1a1P11087 Arfgap1-202ENSMUST00000108859 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Col1a1P11087 Ntrk2-209ENSMUST00000225950 2640 ntBASIC14.06□□□□□ -0.16
Col1a1P11087 Duoxa1-202ENSMUST00000110537 1506 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Col1a1P11087 Yes1-201ENSMUST00000072311 4586 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Col1a1P11087 Sacs-202ENSMUST00000119509 3468 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
Col1a1P11087 C130012C08Rik-201ENSMUST00000194287 3665 ntBASIC14.06□□□□□ -0.16
Col1a1P11087 Pla2g16-202ENSMUST00000136465 3048 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Col1a1P11087 Gm11789-203ENSMUST00000140645 737 ntTSL 2 BASIC14.06□□□□□ -0.16
Col1a1P11087 Cdpf1-205ENSMUST00000150995 566 ntAPPRIS P1 TSL 3 BASIC14.06□□□□□ -0.16
Col1a1P11087 Iqcf3-202ENSMUST00000186668 633 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
Col1a1P11087 Gm42816-201ENSMUST00000198433 325 ntBASIC14.06□□□□□ -0.16
Col1a1P11087 Gm45758-201ENSMUST00000212448 1006 ntBASIC14.06□□□□□ -0.16
Col1a1P11087 Nmi-201ENSMUST00000028314 1291 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Col1a1P11087 Crygs-201ENSMUST00000040592 708 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Col1a1P11087 Gm16380-201ENSMUST00000077997 478 ntBASIC14.06□□□□□ -0.16
Col1a1P11087 Fam155a-201ENSMUST00000110969 3388 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
Col1a1P11087 Gm42928-201ENSMUST00000197338 3339 ntBASIC14.05□□□□□ -0.16
Col1a1P11087 Acap1-201ENSMUST00000001631 2482 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Col1a1P11087 Gm4900-201ENSMUST00000222046 1628 ntBASIC14.05□□□□□ -0.16
Col1a1P11087 Zfp1-201ENSMUST00000077791 1811 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
Col1a1P11087 Prkar1b-203ENSMUST00000110890 2626 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Col1a1P11087 Galnt6-201ENSMUST00000052069 3798 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Col1a1P11087 Myo15b-202ENSMUST00000093911 9340 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
Col1a1P11087 Lhcgr-201ENSMUST00000024916 2553 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Col1a1P11087 F2-202ENSMUST00000111335 1969 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
Col1a1P11087 Ptpn7-203ENSMUST00000187985 1990 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
Col1a1P11087 Slc37a4-202ENSMUST00000213268 1353 ntAPPRIS ALT1 TSL 5 BASIC14.05□□□□□ -0.16
Col1a1P11087 Ildr1-202ENSMUST00000089618 2850 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Col1a1P11087 Grid2-201ENSMUST00000095852 5860 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Col1a1P11087 Rnf133-202ENSMUST00000115354 1333 ntAPPRIS P1 BASIC14.05□□□□□ -0.16
Col1a1P11087 Cyth3-201ENSMUST00000110727 2068 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Col1a1P11087 Prkce-201ENSMUST00000097274 3161 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Col1a1P11087 Podn-202ENSMUST00000106708 2947 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Col1a1P11087 Tcl1-202ENSMUST00000101071 1299 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Col1a1P11087 Rps10-202ENSMUST00000114881 604 ntAPPRIS P1 TSL 3 BASIC14.05□□□□□ -0.16
Col1a1P11087 Gm13117-201ENSMUST00000120894 691 ntBASIC14.05□□□□□ -0.16
Col1a1P11087 Gm26047-201ENSMUST00000157308 113 ntBASIC14.05□□□□□ -0.16
Col1a1P11087 Tcl1-204ENSMUST00000176579 760 ntTSL 2 BASIC14.05□□□□□ -0.16
Col1a1P11087 Gm43552-201ENSMUST00000196121 365 ntAPPRIS P1 TSL 3 BASIC14.05□□□□□ -0.16
Col1a1P11087 Gm26047-202ENSMUST00000198840 115 ntBASIC14.05□□□□□ -0.16
Col1a1P11087 AC114645.1-201ENSMUST00000215831 187 ntBASIC14.05□□□□□ -0.16
Col1a1P11087 AC122346.3-201ENSMUST00000223983 306 ntBASIC14.05□□□□□ -0.16
Col1a1P11087 AC118639.2-201ENSMUST00000226289 223 ntBASIC14.05□□□□□ -0.16
Col1a1P11087 Tmem220-202ENSMUST00000079077 1147 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
Col1a1P11087 Rnf183-201ENSMUST00000079420 573 ntAPPRIS P1 BASIC14.05□□□□□ -0.16
Col1a1P11087 Rims1-201ENSMUST00000081544 5954 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
Col1a1P11087 1520401A03Rik-205ENSMUST00000201734 2660 ntAPPRIS P5 TSL 5 BASIC14.05□□□□□ -0.16
Col1a1P11087 Cacng2-201ENSMUST00000019290 5510 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Col1a1P11087 Phldb1-201ENSMUST00000034611 5461 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Col1a1P11087 Stag1-206ENSMUST00000129269 6186 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Col1a1P11087 Ylpm1-207ENSMUST00000168977 4893 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
Col1a1P11087 4732471J01Rik-204ENSMUST00000206436 2430 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Col1a1P11087 Rassf8-201ENSMUST00000032388 1733 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Col1a1P11087 Slc9b1-201ENSMUST00000078568 2248 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 60.8 ms