Protein–RNA interactions for Protein: P10855

Ccl3, C-C motif chemokine 3, mousemouse

Predictions only

Length 92 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccl3P10855 Dbf4-204ENSMUST00000168500 2000 ntTSL 5 BASIC10.7□□□□□ -0.7
Ccl3P10855 Lhfpl1-201ENSMUST00000040084 1830 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Ccl3P10855 Thrb-203ENSMUST00000091471 1758 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Ccl3P10855 Ldb3-203ENSMUST00000022330 1586 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
Ccl3P10855 Gm6198-201ENSMUST00000191337 2929 ntBASIC10.7□□□□□ -0.7
Ccl3P10855 Prkaca-202ENSMUST00000211558 1399 ntTSL 5 BASIC10.7□□□□□ -0.7
Ccl3P10855 Trim29-201ENSMUST00000034511 2735 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Ccl3P10855 F630040K05Rik-202ENSMUST00000180558 2633 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
Ccl3P10855 Scp2-201ENSMUST00000030340 2640 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Ccl3P10855 Ptgdr2-201ENSMUST00000037261 2644 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Ccl3P10855 Nudt18-201ENSMUST00000089049 3926 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Ccl3P10855 Ccdc163-202ENSMUST00000106462 1112 ntAPPRIS ALT2 TSL 1 (best) BASIC10.7□□□□□ -0.7
Ccl3P10855 Pmp22-202ENSMUST00000108700 733 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Ccl3P10855 2900011O08Rik-202ENSMUST00000118412 954 ntTSL 3 BASIC10.7□□□□□ -0.7
Ccl3P10855 Gm13328-201ENSMUST00000120816 1020 ntBASIC10.7□□□□□ -0.7
Ccl3P10855 Nop56-204ENSMUST00000136621 868 ntTSL 5 BASIC10.7□□□□□ -0.7
Ccl3P10855 Nudt6-207ENSMUST00000141438 899 ntTSL 2 BASIC10.7□□□□□ -0.7
Ccl3P10855 Gm13391-202ENSMUST00000147685 816 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
Ccl3P10855 Tmem40-206ENSMUST00000170625 843 ntAPPRIS ALT2 TSL 3 BASIC10.7□□□□□ -0.7
Ccl3P10855 Ighv5-11-201ENSMUST00000193354 371 ntBASIC10.7□□□□□ -0.7
Ccl3P10855 Gm43520-201ENSMUST00000197996 164 ntBASIC10.7□□□□□ -0.7
Ccl3P10855 Gm21221-201ENSMUST00000202876 1073 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
Ccl3P10855 Gm44867-201ENSMUST00000205675 530 ntTSL 3 BASIC10.7□□□□□ -0.7
Ccl3P10855 Gm45460-201ENSMUST00000211385 1038 ntTSL 5 BASIC10.7□□□□□ -0.7
Ccl3P10855 Gm45781-201ENSMUST00000212860 539 ntTSL 5 BASIC10.7□□□□□ -0.7
Ccl3P10855 AC027700.1-201ENSMUST00000213965 370 ntTSL 5 BASIC10.7□□□□□ -0.7
Ccl3P10855 Gm2553-201ENSMUST00000215986 605 ntBASIC10.7□□□□□ -0.7
Ccl3P10855 1110019B22Rik-202ENSMUST00000218396 989 ntTSL 5 BASIC10.7□□□□□ -0.7
Ccl3P10855 Gm18636-201ENSMUST00000218846 1066 ntBASIC10.7□□□□□ -0.7
Ccl3P10855 Gm6867-201ENSMUST00000219165 425 ntBASIC10.7□□□□□ -0.7
Ccl3P10855 Gm32635-201ENSMUST00000221493 1162 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
Ccl3P10855 AC166344.1-201ENSMUST00000223745 674 ntBASIC10.7□□□□□ -0.7
Ccl3P10855 AC099645.1-201ENSMUST00000226476 1105 ntBASIC10.7□□□□□ -0.7
Ccl3P10855 Npff-201ENSMUST00000023814 540 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Ccl3P10855 Nop10-201ENSMUST00000028553 1109 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Ccl3P10855 Gm9873-201ENSMUST00000063891 1097 ntBASIC10.7□□□□□ -0.7
Ccl3P10855 Try10-201ENSMUST00000072103 860 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Ccl3P10855 Amtn-201ENSMUST00000073363 1022 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Ccl3P10855 Rpl15-201ENSMUST00000079419 883 ntAPPRIS P1 TSL 2 BASIC10.7□□□□□ -0.7
Ccl3P10855 1810009A15Rik-201ENSMUST00000096251 806 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Ccl3P10855 Ncor2-204ENSMUST00000111394 7452 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
Ccl3P10855 Scube2-201ENSMUST00000007423 3571 ntTSL 2 BASIC10.7□□□□□ -0.7
Ccl3P10855 Epha8-201ENSMUST00000030420 4713 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Ccl3P10855 Ankrd17-201ENSMUST00000014421 10458 ntAPPRIS P4 TSL 5 BASIC10.7□□□□□ -0.7
Ccl3P10855 Tsku-207ENSMUST00000206414 2310 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Ccl3P10855 Senp3-201ENSMUST00000005336 2313 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Ccl3P10855 Tfe3-201ENSMUST00000077680 3277 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Ccl3P10855 Borcs7-201ENSMUST00000074912 2176 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Ccl3P10855 Phf13-201ENSMUST00000055688 3205 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Ccl3P10855 Sema3b-205ENSMUST00000102532 3191 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Ccl3P10855 Pdp1-203ENSMUST00000108297 4201 ntAPPRIS P3 TSL 1 (best) BASIC10.7□□□□□ -0.7
Ccl3P10855 Plagl1-202ENSMUST00000121646 5260 ntAPPRIS P2 TSL 1 (best) BASIC10.7□□□□□ -0.7
Ccl3P10855 Kcnk13-202ENSMUST00000160413 3061 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Ccl3P10855 Prkag3-202ENSMUST00000113672 2003 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
Ccl3P10855 4930588K23Rik-201ENSMUST00000156827 1963 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
Ccl3P10855 Crmp1-201ENSMUST00000031004 2906 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Ccl3P10855 Cep97-202ENSMUST00000117468 2887 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
Ccl3P10855 Mpp4-204ENSMUST00000186477 1885 ntAPPRIS ALT2 TSL 5 BASIC10.7□□□□□ -0.7
Ccl3P10855 Sox11-201ENSMUST00000079063 8311 ntAPPRIS P1 BASIC10.7□□□□□ -0.7
Ccl3P10855 Sesn3-204ENSMUST00000208222 9125 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Ccl3P10855 Fbn1-201ENSMUST00000028633 9847 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Ccl3P10855 Aebp2-206ENSMUST00000161335 2524 ntAPPRIS ALT2 TSL 1 (best) BASIC10.69□□□□□ -0.7
Ccl3P10855 Gm10681-202ENSMUST00000178221 1605 ntAPPRIS P1 TSL 5 BASIC10.69□□□□□ -0.7
Ccl3P10855 Tagln2-202ENSMUST00000111230 1586 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Ccl3P10855 Pccb-201ENSMUST00000035116 2320 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Ccl3P10855 Dennd6b-201ENSMUST00000078953 4607 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Ccl3P10855 Nfkb2-201ENSMUST00000073116 3054 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Ccl3P10855 Hdgfl2-212ENSMUST00000226053 2270 ntAPPRIS P2 BASIC10.69□□□□□ -0.7
Ccl3P10855 B4galnt3-203ENSMUST00000212457 2958 ntAPPRIS ALT2 TSL 5 BASIC10.69□□□□□ -0.7
Ccl3P10855 4930588G17Rik-201ENSMUST00000208075 1474 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
Ccl3P10855 Eif4enif1-213ENSMUST00000179770 3676 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Ccl3P10855 Lctl-201ENSMUST00000034969 2171 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Ccl3P10855 4930486L24Rik-201ENSMUST00000091569 1432 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Ccl3P10855 Hk1-202ENSMUST00000099691 4278 ntAPPRIS ALT2 TSL 1 (best) BASIC10.69□□□□□ -0.7
Ccl3P10855 Galns-203ENSMUST00000212319 2111 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
Ccl3P10855 Arl11-202ENSMUST00000224727 2095 ntAPPRIS P1 BASIC10.69□□□□□ -0.7
Ccl3P10855 Gm6903-201ENSMUST00000160509 1366 ntBASIC10.69□□□□□ -0.7
Ccl3P10855 Slc6a6-201ENSMUST00000032185 6186 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Ccl3P10855 Gsdma-201ENSMUST00000017348 2726 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Ccl3P10855 Arcn1-201ENSMUST00000034607 4072 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Ccl3P10855 Map7d1-201ENSMUST00000061143 3351 ntAPPRIS P3 TSL 1 (best) BASIC10.69□□□□□ -0.7
Ccl3P10855 Mcm8-202ENSMUST00000066559 3397 ntAPPRIS P3 TSL 1 (best) BASIC10.69□□□□□ -0.7
Ccl3P10855 Cog1-201ENSMUST00000018805 3935 ntAPPRIS P2 TSL 1 (best) BASIC10.69□□□□□ -0.7
Ccl3P10855 Pbxip1-201ENSMUST00000038942 4479 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Ccl3P10855 Mrps17-204ENSMUST00000119604 1208 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Ccl3P10855 Gm15610-201ENSMUST00000120584 195 ntBASIC10.69□□□□□ -0.7
Ccl3P10855 Gm11836-201ENSMUST00000121022 441 ntBASIC10.69□□□□□ -0.7
Ccl3P10855 Gm13182-201ENSMUST00000122241 312 ntBASIC10.69□□□□□ -0.7
Ccl3P10855 Sumo3-203ENSMUST00000124024 776 ntTSL 2 BASIC10.69□□□□□ -0.7
Ccl3P10855 Spx-202ENSMUST00000126521 357 ntAPPRIS P2 TSL 5 BASIC10.69□□□□□ -0.7
Ccl3P10855 2610005L07Rik-201ENSMUST00000139264 948 ntBASIC10.69□□□□□ -0.7
Ccl3P10855 Gm13830-203ENSMUST00000148916 247 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
Ccl3P10855 Plgrkt-209ENSMUST00000152936 604 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
Ccl3P10855 Gm15978-201ENSMUST00000161043 738 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
Ccl3P10855 Gm21092-201ENSMUST00000178995 955 ntBASIC10.69□□□□□ -0.7
Ccl3P10855 Gm29088-201ENSMUST00000189363 581 ntTSL 3 BASIC10.69□□□□□ -0.7
Ccl3P10855 Gm38117-201ENSMUST00000194653 939 ntBASIC10.69□□□□□ -0.7
Ccl3P10855 Gm44329-201ENSMUST00000197469 112 ntBASIC10.69□□□□□ -0.7
Ccl3P10855 Pgpep1l-202ENSMUST00000207874 677 ntAPPRIS P1 TSL 5 BASIC10.69□□□□□ -0.7
Ccl3P10855 Gm45441-202ENSMUST00000209301 1235 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
Retrieved 100 of 76,532 protein–RNA pairs in 91.5 ms