Protein–RNA interactions for Protein: P0C090

Rc3h2, Roquin-2, mousemouse

Known RBP Predictions only

Length 1,187 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rc3h2P0C090 Hars2-201ENSMUST00000019287 2002 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Rc3h2P0C090 Vmn2r-ps25-201ENSMUST00000202322 2321 ntBASIC12.41□□□□□ -0.42
Rc3h2P0C090 Spata48-201ENSMUST00000020410 1430 ntAPPRIS ALT2 TSL 5 BASIC12.41□□□□□ -0.42
Rc3h2P0C090 Gm21057-202ENSMUST00000206111 512 ntTSL 2 BASIC12.41□□□□□ -0.42
Rc3h2P0C090 Gm45765-201ENSMUST00000212027 1035 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Rc3h2P0C090 8030455M16Rik-201ENSMUST00000213014 902 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Rc3h2P0C090 Gm7049-201ENSMUST00000223520 1712 ntBASIC12.41□□□□□ -0.42
Rc3h2P0C090 C130026L21Rik-201ENSMUST00000064930 2472 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Rc3h2P0C090 Gm26448-201ENSMUST00000082446 203 ntBASIC12.41□□□□□ -0.42
Rc3h2P0C090 Kmt2e-201ENSMUST00000094962 7252 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
Rc3h2P0C090 Man1a2-201ENSMUST00000008907 7969 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Rc3h2P0C090 Rbpj-207ENSMUST00000201883 4961 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Rc3h2P0C090 Arhgef40-202ENSMUST00000100639 4843 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Rc3h2P0C090 D830024N08Rik-201ENSMUST00000212132 2899 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Rc3h2P0C090 Ccdc162-208ENSMUST00000179614 2739 ntTSL 5 BASIC12.41□□□□□ -0.42
Rc3h2P0C090 Trim55-201ENSMUST00000029139 2595 ntAPPRIS P1 TSL 2 BASIC12.41□□□□□ -0.42
Rc3h2P0C090 Arid5a-204ENSMUST00000115032 4640 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
Rc3h2P0C090 Gm595-201ENSMUST00000114928 2122 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Rc3h2P0C090 B430119L08Rik-201ENSMUST00000130054 1994 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Rc3h2P0C090 Got1l1-201ENSMUST00000038174 1356 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Rc3h2P0C090 Pdp1-203ENSMUST00000108297 4201 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
Rc3h2P0C090 Leprot-202ENSMUST00000106927 1754 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Rc3h2P0C090 Gm7114-201ENSMUST00000190159 1789 ntBASIC12.41□□□□□ -0.42
Rc3h2P0C090 Lamc3-201ENSMUST00000028187 5871 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Rc3h2P0C090 Wdr66-202ENSMUST00000121964 4873 ntAPPRIS P1 TSL 5 BASIC12.4□□□□□ -0.42
Rc3h2P0C090 Lynx1-201ENSMUST00000023259 4023 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Rc3h2P0C090 Ildr1-202ENSMUST00000089618 2850 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Rc3h2P0C090 AC123834.1-201ENSMUST00000225346 2043 ntBASIC12.4□□□□□ -0.42
Rc3h2P0C090 Adh4-201ENSMUST00000013458 1314 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Rc3h2P0C090 Nr1i3-202ENSMUST00000075469 1305 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Rc3h2P0C090 Sipa1l2-204ENSMUST00000212987 6690 ntAPPRIS P2 TSL 5 BASIC12.4□□□□□ -0.42
Rc3h2P0C090 Rgs6-222ENSMUST00000202210 3069 ntAPPRIS ALT2 TSL 5 BASIC12.4□□□□□ -0.42
Rc3h2P0C090 Zbtb20-201ENSMUST00000079441 3086 ntAPPRIS P3 TSL 5 BASIC12.4□□□□□ -0.42
Rc3h2P0C090 AC171277.1-201ENSMUST00000216902 1441 ntBASIC12.4□□□□□ -0.42
Rc3h2P0C090 Secisbp2-201ENSMUST00000040117 3328 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Rc3h2P0C090 Gpatch4-203ENSMUST00000193398 2210 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Rc3h2P0C090 Sh3kbp1-206ENSMUST00000112456 7317 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Rc3h2P0C090 Gm26286-201ENSMUST00000104166 134 ntBASIC12.4□□□□□ -0.42
Rc3h2P0C090 Gm12348-201ENSMUST00000138915 313 ntTSL 3 BASIC12.4□□□□□ -0.42
Rc3h2P0C090 Gm13391-202ENSMUST00000147685 816 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Rc3h2P0C090 Rpl41-203ENSMUST00000176683 437 ntAPPRIS P2 TSL 2 BASIC12.4□□□□□ -0.42
Rc3h2P0C090 3110045C21Rik-201ENSMUST00000180638 1135 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Rc3h2P0C090 Pex1-208ENSMUST00000195894 528 ntTSL 3 BASIC12.4□□□□□ -0.42
Rc3h2P0C090 Gm9555-201ENSMUST00000200908 583 ntBASIC12.4□□□□□ -0.42
Rc3h2P0C090 Gm44711-201ENSMUST00000205414 1264 ntBASIC12.4□□□□□ -0.42
Rc3h2P0C090 Gm44882-201ENSMUST00000205702 802 ntBASIC12.4□□□□□ -0.42
Rc3h2P0C090 Gm807-202ENSMUST00000224929 408 ntBASIC12.4□□□□□ -0.42
Rc3h2P0C090 Mill2-201ENSMUST00000072386 1121 ntAPPRIS P4 TSL 1 (best) BASIC12.4□□□□□ -0.42
Rc3h2P0C090 Kcnj11-205ENSMUST00000211674 3142 ntAPPRIS P1 BASIC12.4□□□□□ -0.42
Rc3h2P0C090 Snrpn-201ENSMUST00000059305 1932 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Rc3h2P0C090 Tmem168-201ENSMUST00000031554 4587 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Rc3h2P0C090 Aifm3-201ENSMUST00000023448 2688 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.42
Rc3h2P0C090 Dsp-201ENSMUST00000124830 9592 ntAPPRIS P2 TSL 5 BASIC12.4□□□□□ -0.42
Rc3h2P0C090 Spo11-203ENSMUST00000109126 1625 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Rc3h2P0C090 Smarcb1-202ENSMUST00000121304 1622 ntAPPRIS ALT1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Rc3h2P0C090 Rbm14-201ENSMUST00000006625 3165 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Rc3h2P0C090 Plxnb2-201ENSMUST00000060808 6394 ntAPPRIS P1 TSL 5 BASIC12.4□□□□□ -0.43
Rc3h2P0C090 Pdik1l-201ENSMUST00000061234 4686 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.43
Rc3h2P0C090 Pcid2-201ENSMUST00000164416 2860 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.43
Rc3h2P0C090 Ackr2-201ENSMUST00000050327 2853 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.43
Rc3h2P0C090 Slc35e2-202ENSMUST00000105608 6291 ntAPPRIS P1 TSL 5 BASIC12.39□□□□□ -0.43
Rc3h2P0C090 Gm36635-201ENSMUST00000221152 1332 ntTSL 5 BASIC12.39□□□□□ -0.43
Rc3h2P0C090 Lnx1-206ENSMUST00000121690 2302 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Rc3h2P0C090 Acoxl-201ENSMUST00000028859 2842 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Rc3h2P0C090 Llgl2-201ENSMUST00000103032 3551 ntAPPRIS P3 TSL 1 (best) BASIC12.39□□□□□ -0.43
Rc3h2P0C090 Nsd3-203ENSMUST00000136107 3818 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Rc3h2P0C090 Nup160-201ENSMUST00000057481 5684 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Rc3h2P0C090 Cdc37l1-207ENSMUST00000225210 4163 ntAPPRIS ALT2 BASIC12.39□□□□□ -0.43
Rc3h2P0C090 Olfr140-202ENSMUST00000111506 3449 ntAPPRIS P1 TSL 2 BASIC12.39□□□□□ -0.43
Rc3h2P0C090 Cd163l1-203ENSMUST00000209398 3437 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Rc3h2P0C090 Pnma3-201ENSMUST00000060418 3405 ntAPPRIS P1 BASIC12.39□□□□□ -0.43
Rc3h2P0C090 Rita1-207ENSMUST00000177800 1668 ntAPPRIS P1 TSL 5 BASIC12.39□□□□□ -0.43
Rc3h2P0C090 6030466F02Rik-201ENSMUST00000212339 1434 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Rc3h2P0C090 Msh6-201ENSMUST00000005503 4254 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Rc3h2P0C090 Klhl14-201ENSMUST00000049105 4018 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Rc3h2P0C090 Tmem63b-201ENSMUST00000113523 3284 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Rc3h2P0C090 Gm9530-201ENSMUST00000181160 3281 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Rc3h2P0C090 Thap1-201ENSMUST00000036807 2295 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Rc3h2P0C090 Tktl2-201ENSMUST00000002025 2021 ntAPPRIS P1 BASIC12.39□□□□□ -0.43
Rc3h2P0C090 Hspa4l-208ENSMUST00000204702 9479 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Rc3h2P0C090 Brwd1-201ENSMUST00000023631 8209 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Rc3h2P0C090 Pmp22-203ENSMUST00000108701 723 ntAPPRIS P1 TSL 3 BASIC12.39□□□□□ -0.43
Rc3h2P0C090 Gm14058-201ENSMUST00000116082 735 ntBASIC12.39□□□□□ -0.43
Rc3h2P0C090 Gm13035-201ENSMUST00000117496 342 ntBASIC12.39□□□□□ -0.43
Rc3h2P0C090 Eef1akmt2-202ENSMUST00000120425 573 ntTSL 3 BASIC12.39□□□□□ -0.43
Rc3h2P0C090 Gm12196-201ENSMUST00000120954 262 ntBASIC12.39□□□□□ -0.43
Rc3h2P0C090 H2-Q3-201ENSMUST00000172583 608 ntBASIC12.39□□□□□ -0.43
Rc3h2P0C090 Trmt112-204ENSMUST00000174786 646 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Rc3h2P0C090 Gm9630-201ENSMUST00000178304 885 ntBASIC12.39□□□□□ -0.43
Rc3h2P0C090 Gm28375-201ENSMUST00000185304 430 ntTSL 3 BASIC12.39□□□□□ -0.43
Rc3h2P0C090 Gm29539-201ENSMUST00000188031 758 ntTSL 3 BASIC12.39□□□□□ -0.43
Rc3h2P0C090 Gm3332-201ENSMUST00000189337 928 ntBASIC12.39□□□□□ -0.43
Rc3h2P0C090 Gm43184-201ENSMUST00000197247 542 ntBASIC12.39□□□□□ -0.43
Rc3h2P0C090 Rbakdn-201ENSMUST00000198334 520 ntTSL 2 BASIC12.39□□□□□ -0.43
Rc3h2P0C090 Gm45118-201ENSMUST00000208928 825 ntBASIC12.39□□□□□ -0.43
Rc3h2P0C090 Gm7207-201ENSMUST00000211575 1067 ntBASIC12.39□□□□□ -0.43
Rc3h2P0C090 Gm4157-201ENSMUST00000211647 679 ntBASIC12.39□□□□□ -0.43
Rc3h2P0C090 AC153830.1-201ENSMUST00000218522 594 ntTSL 5 BASIC12.39□□□□□ -0.43
Rc3h2P0C090 AC154680.1-201ENSMUST00000224376 859 ntBASIC12.39□□□□□ -0.43
Rc3h2P0C090 Ankrd7-201ENSMUST00000031489 1190 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 48.4 ms