Protein–RNA interactions for Protein: P09405

Ncl, Nucleolin, mousemouse

Known RBP Predictions only

Length 707 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NclP09405 Atp13a1-201ENSMUST00000034326 3915 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
NclP09405 Rpl9-204ENSMUST00000127874 2690 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
NclP09405 Nsmce2-202ENSMUST00000168722 2679 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
NclP09405 Cyb5rl-203ENSMUST00000106758 2516 ntAPPRIS P1 TSL 5 BASIC18.01■□□□□ 0.47
NclP09405 Cdk7-201ENSMUST00000091299 1988 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
NclP09405 Setd3-202ENSMUST00000109879 2387 ntTSL 3 BASIC18.01■□□□□ 0.47
NclP09405 6030466F02Rik-201ENSMUST00000212339 1434 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
NclP09405 Nfib-203ENSMUST00000107245 9116 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
NclP09405 Col22a1-202ENSMUST00000159993 8809 ntAPPRIS P1 TSL 5 BASIC18.01■□□□□ 0.47
NclP09405 Gm3332-201ENSMUST00000189337 928 ntBASIC18.01■□□□□ 0.47
NclP09405 Gm45765-201ENSMUST00000212027 1035 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
NclP09405 Snf8-201ENSMUST00000006217 1004 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
NclP09405 Sprr2a2-202ENSMUST00000090871 722 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
NclP09405 Mapt-204ENSMUST00000106992 5253 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
NclP09405 Nhlh2-203ENSMUST00000198675 3943 ntAPPRIS P1 TSL 2 BASIC18.01■□□□□ 0.47
NclP09405 Thtpa-201ENSMUST00000050575 2830 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
NclP09405 Got1l1-201ENSMUST00000038174 1356 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
NclP09405 Spata18-203ENSMUST00000113548 1623 ntAPPRIS ALT2 TSL 5 BASIC18.01■□□□□ 0.47
NclP09405 Corin-201ENSMUST00000005352 4862 ntAPPRIS P3 TSL 1 (best) BASIC18.01■□□□□ 0.47
NclP09405 Atg7-212ENSMUST00000182902 2543 ntAPPRIS P3 TSL 2 BASIC18.01■□□□□ 0.47
NclP09405 Pou2af1-201ENSMUST00000034554 2548 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
NclP09405 Cyyr1-201ENSMUST00000114174 5464 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
NclP09405 Il21r-202ENSMUST00000206103 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
NclP09405 Rgs12-205ENSMUST00000114283 2628 ntAPPRIS ALT2 TSL 5 BASIC18.01■□□□□ 0.47
NclP09405 5730409E04Rik-202ENSMUST00000164362 2855 ntAPPRIS P1 TSL 3 BASIC18.01■□□□□ 0.47
NclP09405 4930588K23Rik-201ENSMUST00000156827 1963 ntTSL 1 (best) BASIC18■□□□□ 0.47
NclP09405 Prkcd-204ENSMUST00000112206 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
NclP09405 Mfap3l-202ENSMUST00000160719 6335 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
NclP09405 Map6-201ENSMUST00000068973 3430 ntAPPRIS P3 TSL 1 (best) BASIC18■□□□□ 0.47
NclP09405 Cntfr-204ENSMUST00000102962 1926 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
NclP09405 4930432E11Rik-202ENSMUST00000063585 10871 ntBASIC18■□□□□ 0.47
NclP09405 Pex2-204ENSMUST00000165309 2038 ntAPPRIS P1 TSL 5 BASIC18■□□□□ 0.47
NclP09405 Gm43677-201ENSMUST00000198098 2378 ntBASIC18■□□□□ 0.47
NclP09405 Gm11941-201ENSMUST00000119904 610 ntBASIC18■□□□□ 0.47
NclP09405 Gm15884-201ENSMUST00000143765 643 ntTSL 3 BASIC18■□□□□ 0.47
NclP09405 Gm28375-201ENSMUST00000185304 430 ntTSL 3 BASIC18■□□□□ 0.47
NclP09405 Gm29539-201ENSMUST00000188031 758 ntTSL 3 BASIC18■□□□□ 0.47
NclP09405 A430027H14Rik-202ENSMUST00000192797 618 ntTSL 2 BASIC18■□□□□ 0.47
NclP09405 Gm42629-201ENSMUST00000199063 1102 ntBASIC18■□□□□ 0.47
NclP09405 Gm4482-201ENSMUST00000200876 742 ntBASIC18■□□□□ 0.47
NclP09405 Gm43050-202ENSMUST00000201152 651 ntTSL 1 (best) BASIC18■□□□□ 0.47
NclP09405 Gm21057-202ENSMUST00000206111 512 ntTSL 2 BASIC18■□□□□ 0.47
NclP09405 Rsph1-201ENSMUST00000024832 1164 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
NclP09405 Mill2-201ENSMUST00000072386 1121 ntAPPRIS P4 TSL 1 (best) BASIC18■□□□□ 0.47
NclP09405 Gm27196-201ENSMUST00000184787 2582 ntBASIC18■□□□□ 0.47
NclP09405 Mtus1-202ENSMUST00000059115 6548 ntTSL 5 BASIC18■□□□□ 0.47
NclP09405 Slc39a8-206ENSMUST00000180196 3383 ntAPPRIS P1 TSL 5 BASIC18■□□□□ 0.47
NclP09405 Plekhg2-203ENSMUST00000121085 4649 ntAPPRIS ALT2 TSL 2 BASIC18■□□□□ 0.47
NclP09405 Pcp4l1-201ENSMUST00000111332 1577 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
NclP09405 Zfp61-208ENSMUST00000165241 1668 ntAPPRIS P1 TSL 5 BASIC17.99■□□□□ 0.47
NclP09405 Ndufs4-201ENSMUST00000022286 1698 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
NclP09405 St6gal1-201ENSMUST00000023601 4506 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
NclP09405 Zfp536-201ENSMUST00000056338 4621 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
NclP09405 Otud7b-201ENSMUST00000035519 8043 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
NclP09405 Shtn1-202ENSMUST00000163821 3767 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
NclP09405 Asl-202ENSMUST00000159619 2088 ntAPPRIS P1 TSL 5 BASIC17.99■□□□□ 0.47
NclP09405 AC159195.1-201ENSMUST00000225867 2086 ntBASIC17.99■□□□□ 0.47
NclP09405 Armcx1-203ENSMUST00000113197 2179 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
NclP09405 Dgkg-201ENSMUST00000023578 2725 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
NclP09405 Gm14247-201ENSMUST00000120950 237 ntBASIC17.99■□□□□ 0.47
NclP09405 Gm12164-201ENSMUST00000121695 551 ntBASIC17.99■□□□□ 0.47
NclP09405 Snrpa-206ENSMUST00000163311 1288 ntAPPRIS P1 TSL 2 BASIC17.99■□□□□ 0.47
NclP09405 3110045C21Rik-201ENSMUST00000180638 1135 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
NclP09405 Gm26782-202ENSMUST00000181697 971 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
NclP09405 Gm43584-201ENSMUST00000199762 605 ntTSL 3 BASIC17.99■□□□□ 0.47
NclP09405 Gm10069-203ENSMUST00000204081 907 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
NclP09405 Ntan1-201ENSMUST00000023362 1175 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
NclP09405 1110025L11Rik-201ENSMUST00000089104 591 ntAPPRIS P1 BASIC17.99■□□□□ 0.47
NclP09405 Clpx-202ENSMUST00000113824 2809 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
NclP09405 Exosc1-202ENSMUST00000112123 1499 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
NclP09405 Plcb1-202ENSMUST00000110116 7003 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
NclP09405 5830411N06Rik-202ENSMUST00000093984 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
NclP09405 AC125108.1-201ENSMUST00000218986 2330 ntBASIC17.99■□□□□ 0.47
NclP09405 A730020E08Rik-201ENSMUST00000180421 3387 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
NclP09405 Dync1li1-201ENSMUST00000047404 2601 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
NclP09405 Ripk3-202ENSMUST00000168716 1964 ntTSL 5 BASIC17.99■□□□□ 0.47
NclP09405 Ephb6-201ENSMUST00000114732 3762 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
NclP09405 Rtn4-203ENSMUST00000102841 4060 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
NclP09405 Fmo1-201ENSMUST00000046049 2388 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
NclP09405 AC160405.1-201ENSMUST00000218207 1545 ntBASIC17.98■□□□□ 0.47
NclP09405 Adora1-201ENSMUST00000038191 3625 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
NclP09405 Spo11-203ENSMUST00000109126 1625 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
NclP09405 Trmt1-204ENSMUST00000109768 2044 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
NclP09405 Dbf4-204ENSMUST00000168500 2000 ntTSL 5 BASIC17.98■□□□□ 0.47
NclP09405 Pogk-202ENSMUST00000128861 4848 ntAPPRIS P3 TSL 1 (best) BASIC17.98■□□□□ 0.47
NclP09405 Gm2420-201ENSMUST00000119864 2149 ntBASIC17.98■□□□□ 0.47
NclP09405 Sun2-203ENSMUST00000100439 3768 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
NclP09405 Ccdc162-203ENSMUST00000099932 2742 ntTSL 5 BASIC17.98■□□□□ 0.47
NclP09405 Nyap1-202ENSMUST00000118326 4565 ntAPPRIS P3 TSL 1 (best) BASIC17.98■□□□□ 0.47
NclP09405 Urgcp-202ENSMUST00000093362 5089 ntAPPRIS P4 TSL 1 (best) BASIC17.98■□□□□ 0.47
NclP09405 Tmtc3-201ENSMUST00000058154 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
NclP09405 Rnf152-202ENSMUST00000172299 8406 ntAPPRIS P1 TSL 2 BASIC17.98■□□□□ 0.47
NclP09405 Ccl1-202ENSMUST00000108189 514 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
NclP09405 Pmp22-203ENSMUST00000108701 723 ntAPPRIS P1 TSL 3 BASIC17.98■□□□□ 0.47
NclP09405 n-R5s14-201ENSMUST00000122688 107 ntBASIC17.98■□□□□ 0.47
NclP09405 Smpd4-223ENSMUST00000172182 516 ntTSL 3 BASIC17.98■□□□□ 0.47
NclP09405 Rbakdn-201ENSMUST00000198334 520 ntTSL 2 BASIC17.98■□□□□ 0.47
NclP09405 S100a3-205ENSMUST00000200508 587 ntAPPRIS P1 TSL 3 BASIC17.98■□□□□ 0.47
NclP09405 Ccl1-201ENSMUST00000021043 611 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
NclP09405 AC098716.1-201ENSMUST00000213527 703 ntBASIC17.98■□□□□ 0.47
Retrieved 100 of 76,532 protein–RNA pairs in 38 ms