Protein–RNA interactions for Protein: P06798

Hoxa4, Homeobox protein Hox-A4, mousemouse

Predictions only

Length 285 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxa4P06798 Pdik1l-201ENSMUST00000061234 4686 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Hoxa4P06798 Olfr450-201ENSMUST00000067503 933 ntAPPRIS P1 BASIC11.97□□□□□ -0.49
Hoxa4P06798 Cldn17-201ENSMUST00000069549 1172 ntAPPRIS P1 BASIC11.97□□□□□ -0.49
Hoxa4P06798 Gm6994-201ENSMUST00000088880 1163 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Hoxa4P06798 Gm10308-201ENSMUST00000095183 742 ntAPPRIS P1 TSL 2 BASIC11.97□□□□□ -0.49
Hoxa4P06798 Sfxn3-203ENSMUST00000111954 2867 ntTSL 5 BASIC11.97□□□□□ -0.49
Hoxa4P06798 Ces1d-201ENSMUST00000034172 2004 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Hoxa4P06798 Spata7-203ENSMUST00000101146 1913 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Hoxa4P06798 P2rx1-201ENSMUST00000021141 2486 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Hoxa4P06798 Abca3-201ENSMUST00000039013 6476 ntAPPRIS P2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Hoxa4P06798 Cyp27b1-201ENSMUST00000165764 2380 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Hoxa4P06798 Chil1-201ENSMUST00000082060 1687 ntAPPRIS P2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Hoxa4P06798 Rabepk-207ENSMUST00000145903 2968 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Hoxa4P06798 Nelfcd-202ENSMUST00000109075 2279 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Hoxa4P06798 Astn1-202ENSMUST00000170718 2927 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Hoxa4P06798 Olfr140-202ENSMUST00000111506 3449 ntAPPRIS P1 TSL 2 BASIC11.96□□□□□ -0.49
Hoxa4P06798 Qrich2-201ENSMUST00000093909 2156 ntAPPRIS P2 TSL 1 (best) BASIC11.96□□□□□ -0.49
Hoxa4P06798 Tmcc2-206ENSMUST00000142609 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.49
Hoxa4P06798 AC126257.1-201ENSMUST00000213195 1536 ntBASIC11.96□□□□□ -0.49
Hoxa4P06798 6430550D23Rik-201ENSMUST00000086145 1520 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.49
Hoxa4P06798 Wdr18-201ENSMUST00000045247 3911 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Hoxa4P06798 Chrd-201ENSMUST00000007171 3275 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Hoxa4P06798 Zscan22-201ENSMUST00000055528 2620 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Hoxa4P06798 Wdr31-201ENSMUST00000030087 1440 ntAPPRIS P3 TSL 1 (best) BASIC11.96□□□□□ -0.49
Hoxa4P06798 Entpd4-206ENSMUST00000184973 3589 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Hoxa4P06798 Entpd4b-204ENSMUST00000185072 3589 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Hoxa4P06798 Herpud1-201ENSMUST00000034220 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.49
Hoxa4P06798 Atp6v0a1-210ENSMUST00000168757 3967 ntAPPRIS ALT1 TSL 5 BASIC11.96□□□□□ -0.49
Hoxa4P06798 Gm10152-201ENSMUST00000193475 1344 ntBASIC11.96□□□□□ -0.49
Hoxa4P06798 4930528D03Rik-203ENSMUST00000225577 1348 ntBASIC11.96□□□□□ -0.49
Hoxa4P06798 Fam173b-203ENSMUST00000161061 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.49
Hoxa4P06798 Gm11439-201ENSMUST00000118598 409 ntBASIC11.96□□□□□ -0.49
Hoxa4P06798 Gm15172-201ENSMUST00000118945 1046 ntBASIC11.96□□□□□ -0.49
Hoxa4P06798 Gm12380-201ENSMUST00000119012 544 ntBASIC11.96□□□□□ -0.49
Hoxa4P06798 Gm12997-201ENSMUST00000120207 640 ntBASIC11.96□□□□□ -0.49
Hoxa4P06798 Gm11791-201ENSMUST00000139327 336 ntTSL 3 BASIC11.96□□□□□ -0.49
Hoxa4P06798 Gm454-201ENSMUST00000160126 751 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Hoxa4P06798 Mir7677-201ENSMUST00000184226 67 ntBASIC11.96□□□□□ -0.49
Hoxa4P06798 Gm37933-201ENSMUST00000193964 981 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Hoxa4P06798 Gm17931-201ENSMUST00000208132 634 ntBASIC11.96□□□□□ -0.49
Hoxa4P06798 Gm32850-202ENSMUST00000209149 732 ntTSL 5 BASIC11.96□□□□□ -0.49
Hoxa4P06798 Gm21027-201ENSMUST00000219300 1236 ntBASIC11.96□□□□□ -0.49
Hoxa4P06798 Ndufaf5-201ENSMUST00000044825 1166 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Hoxa4P06798 Gm5705-201ENSMUST00000066241 711 ntBASIC11.96□□□□□ -0.49
Hoxa4P06798 Sgk3-201ENSMUST00000097826 2728 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Hoxa4P06798 Bcl2-201ENSMUST00000112751 7191 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Hoxa4P06798 Acsf3-201ENSMUST00000015160 2206 ntAPPRIS P2 TSL 5 BASIC11.96□□□□□ -0.49
Hoxa4P06798 Myo18a-202ENSMUST00000092884 5117 ntAPPRIS ALT2 TSL 5 BASIC11.96□□□□□ -0.5
Hoxa4P06798 Cdc73-201ENSMUST00000018337 11586 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Hoxa4P06798 Cyb5rl-202ENSMUST00000106756 1604 ntTSL 1 (best) BASIC11.96□□□□□ -0.5
Hoxa4P06798 Neil1-202ENSMUST00000186410 1601 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Hoxa4P06798 Scube1-203ENSMUST00000076060 3913 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.5
Hoxa4P06798 Vcl-201ENSMUST00000022369 5267 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Hoxa4P06798 Pygo2-202ENSMUST00000107413 2911 ntTSL 1 (best) BASIC11.96□□□□□ -0.5
Hoxa4P06798 Zfp362-202ENSMUST00000106072 2812 ntAPPRIS P1 TSL 5 BASIC11.96□□□□□ -0.5
Hoxa4P06798 Prickle1-202ENSMUST00000109255 4144 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Hoxa4P06798 Ocrl-203ENSMUST00000115020 3210 ntTSL 1 (best) BASIC11.96□□□□□ -0.5
Hoxa4P06798 5330413P13Rik-204ENSMUST00000210606 1464 ntTSL 5 BASIC11.95□□□□□ -0.5
Hoxa4P06798 Dmac2-201ENSMUST00000077338 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Hoxa4P06798 Anxa8-201ENSMUST00000022519 1880 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Hoxa4P06798 Phf24-201ENSMUST00000069184 6392 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Hoxa4P06798 Vwf-201ENSMUST00000100941 1807 ntTSL 5 BASIC11.95□□□□□ -0.5
Hoxa4P06798 Ash2l-210ENSMUST00000166078 2234 ntAPPRIS ALT2 TSL 5 BASIC11.95□□□□□ -0.5
Hoxa4P06798 Taok2-202ENSMUST00000117394 4985 ntAPPRIS P4 TSL 1 (best) BASIC11.95□□□□□ -0.5
Hoxa4P06798 Sorbs1-203ENSMUST00000165212 2175 ntAPPRIS ALT2 TSL 5 BASIC11.95□□□□□ -0.5
Hoxa4P06798 Borcs7-201ENSMUST00000074912 2176 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Hoxa4P06798 4933427G23Rik-201ENSMUST00000122963 2515 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Hoxa4P06798 Ptpru-201ENSMUST00000030741 4416 ntAPPRIS P1 TSL 5 BASIC11.95□□□□□ -0.5
Hoxa4P06798 Dnaic2-201ENSMUST00000069325 2874 ntAPPRIS P1 TSL 5 BASIC11.95□□□□□ -0.5
Hoxa4P06798 Folr1-203ENSMUST00000106983 1307 ntAPPRIS P1 TSL 5 BASIC11.95□□□□□ -0.5
Hoxa4P06798 Etfrf1-203ENSMUST00000111721 1336 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Hoxa4P06798 Oxnad1-201ENSMUST00000022462 2376 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Hoxa4P06798 Hexim2-202ENSMUST00000107037 1221 ntAPPRIS P1 TSL 2 BASIC11.95□□□□□ -0.5
Hoxa4P06798 Gm15004-201ENSMUST00000119192 630 ntBASIC11.95□□□□□ -0.5
Hoxa4P06798 Gm13376-201ENSMUST00000128743 448 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Hoxa4P06798 Endov-204ENSMUST00000129327 1184 ntTSL 5 BASIC11.95□□□□□ -0.5
Hoxa4P06798 AA672651-201ENSMUST00000151550 489 ntTSL 2 BASIC11.95□□□□□ -0.5
Hoxa4P06798 Ly6g6c-201ENSMUST00000173207 598 ntAPPRIS ALT2 TSL 3 BASIC11.95□□□□□ -0.5
Hoxa4P06798 Ly6g6c-202ENSMUST00000173478 962 ntAPPRIS P2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Hoxa4P06798 Rpl41-203ENSMUST00000176683 437 ntAPPRIS P2 TSL 2 BASIC11.95□□□□□ -0.5
Hoxa4P06798 Swi5-207ENSMUST00000183946 768 ntAPPRIS P3 TSL 1 (best) BASIC11.95□□□□□ -0.5
Hoxa4P06798 Rpl7a-ps10-201ENSMUST00000190579 798 ntBASIC11.95□□□□□ -0.5
Hoxa4P06798 Gm43184-201ENSMUST00000197247 542 ntBASIC11.95□□□□□ -0.5
Hoxa4P06798 Gm4959-201ENSMUST00000197271 1044 ntBASIC11.95□□□□□ -0.5
Hoxa4P06798 Gm42800-201ENSMUST00000202494 733 ntTSL 5 BASIC11.95□□□□□ -0.5
Hoxa4P06798 Tm2d2-202ENSMUST00000210536 727 ntTSL 3 BASIC11.95□□□□□ -0.5
Hoxa4P06798 Cdk19os-201ENSMUST00000044774 534 ntTSL 5 BASIC11.95□□□□□ -0.5
Hoxa4P06798 Cryba2-201ENSMUST00000006721 720 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Hoxa4P06798 Rpl7a-ps3-201ENSMUST00000090170 796 ntBASIC11.95□□□□□ -0.5
Hoxa4P06798 Rpl7a-ps5-201ENSMUST00000095218 807 ntAPPRIS P1 BASIC11.95□□□□□ -0.5
Hoxa4P06798 Aqr-201ENSMUST00000043160 4888 ntAPPRIS P3 TSL 1 (best) BASIC11.95□□□□□ -0.5
Hoxa4P06798 Chrdl1-204ENSMUST00000166406 2605 ntAPPRIS P3 TSL 1 (best) BASIC11.95□□□□□ -0.5
Hoxa4P06798 Grid1-201ENSMUST00000043349 5720 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Hoxa4P06798 Zfp810-201ENSMUST00000086278 3238 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Hoxa4P06798 Pdp1-203ENSMUST00000108297 4201 ntAPPRIS P3 TSL 1 (best) BASIC11.95□□□□□ -0.5
Hoxa4P06798 Ppara-203ENSMUST00000109423 2519 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Hoxa4P06798 Zbtb42-203ENSMUST00000174780 3160 ntTSL 2 BASIC11.95□□□□□ -0.5
Hoxa4P06798 Faap100-201ENSMUST00000026448 3193 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Hoxa4P06798 Kif2c-201ENSMUST00000065896 2842 ntAPPRIS P3 TSL 1 (best) BASIC11.95□□□□□ -0.5
Hoxa4P06798 Mrgprg-201ENSMUST00000058092 1821 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Retrieved 100 of 76,532 protein–RNA pairs in 61.2 ms