Protein–RNA interactions for Protein: P05213

Tuba1b, Tubulin alpha-1B chain, mousemouse

Predictions only

Length 451 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tuba1bP05213 Gm43818-201ENSMUST00000200605 466 ntBASIC11.36□□□□□ -0.59
Tuba1bP05213 Gm43597-201ENSMUST00000201650 1057 ntTSL 3 BASIC11.36□□□□□ -0.59
Tuba1bP05213 AC135669.1-202ENSMUST00000216742 540 ntBASIC11.36□□□□□ -0.59
Tuba1bP05213 Gm34466-201ENSMUST00000222218 505 ntTSL 2 BASIC11.36□□□□□ -0.59
Tuba1bP05213 Rsph9-201ENSMUST00000024762 966 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Tuba1bP05213 Timm10-201ENSMUST00000028470 690 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Tuba1bP05213 Trappc4-201ENSMUST00000034623 1220 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Tuba1bP05213 Gng8-201ENSMUST00000078182 910 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Tuba1bP05213 Nhlrc2-201ENSMUST00000071423 3934 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Tuba1bP05213 Ube2j2-204ENSMUST00000105582 1394 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Tuba1bP05213 Gm38049-201ENSMUST00000195698 1372 ntBASIC11.36□□□□□ -0.59
Tuba1bP05213 Mmd2-201ENSMUST00000037048 3317 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Tuba1bP05213 AC126257.2-201ENSMUST00000215507 2300 ntBASIC11.36□□□□□ -0.59
Tuba1bP05213 Abi1-203ENSMUST00000093171 2411 ntAPPRIS ALT1 TSL 5 BASIC11.36□□□□□ -0.59
Tuba1bP05213 Adora1-203ENSMUST00000169927 4581 ntAPPRIS P1 TSL 5 BASIC11.36□□□□□ -0.59
Tuba1bP05213 Srek1-201ENSMUST00000074616 3934 ntAPPRIS P1 TSL 5 BASIC11.36□□□□□ -0.59
Tuba1bP05213 Tax1bp1-201ENSMUST00000080723 3285 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Tuba1bP05213 Arhgef2-207ENSMUST00000175903 3356 ntAPPRIS ALT2 TSL 5 BASIC11.36□□□□□ -0.59
Tuba1bP05213 Ntng2-202ENSMUST00000071201 1881 ntTSL 5 BASIC11.36□□□□□ -0.59
Tuba1bP05213 Gpc5-203ENSMUST00000176912 2837 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Tuba1bP05213 Timm22-201ENSMUST00000021203 2817 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Tuba1bP05213 Chl1-204ENSMUST00000203912 4628 ntAPPRIS ALT2 TSL 1 (best) BASIC11.36□□□□□ -0.59
Tuba1bP05213 Gm26737-201ENSMUST00000181106 2151 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Tuba1bP05213 Dip2c-201ENSMUST00000166299 4822 ntTSL 5 BASIC11.35□□□□□ -0.59
Tuba1bP05213 Inip-201ENSMUST00000095063 3237 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Tuba1bP05213 Ppnr-201ENSMUST00000190974 3525 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Tuba1bP05213 Nxph2-201ENSMUST00000102945 2579 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Tuba1bP05213 Pygo1-201ENSMUST00000038489 7916 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Tuba1bP05213 Rpap2-205ENSMUST00000112655 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC11.35□□□□□ -0.59
Tuba1bP05213 Fn1-213ENSMUST00000188674 7680 ntAPPRIS ALT2 TSL 1 (best) BASIC11.35□□□□□ -0.59
Tuba1bP05213 Fn1-217ENSMUST00000190780 7694 ntAPPRIS ALT2 TSL 1 (best) BASIC11.35□□□□□ -0.59
Tuba1bP05213 Fam189b-201ENSMUST00000041913 3083 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Tuba1bP05213 Esr1-201ENSMUST00000067086 4344 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Tuba1bP05213 Pdcd1-201ENSMUST00000027507 1930 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Tuba1bP05213 Zfp568-201ENSMUST00000074322 2016 ntAPPRIS P3 TSL 5 BASIC11.35□□□□□ -0.59
Tuba1bP05213 Tdrd9-201ENSMUST00000079009 4809 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Tuba1bP05213 Ephx3-201ENSMUST00000087721 2416 ntAPPRIS P3 TSL 1 (best) BASIC11.35□□□□□ -0.59
Tuba1bP05213 Mindy1-202ENSMUST00000107187 2827 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Tuba1bP05213 Alox12-201ENSMUST00000000329 3001 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Tuba1bP05213 Rps8-201ENSMUST00000102696 860 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Tuba1bP05213 Arl5c-202ENSMUST00000107563 823 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Tuba1bP05213 Cabp5-202ENSMUST00000117400 1258 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Tuba1bP05213 Gm16479-201ENSMUST00000121706 932 ntBASIC11.35□□□□□ -0.59
Tuba1bP05213 Gm11978-201ENSMUST00000122315 466 ntBASIC11.35□□□□□ -0.59
Tuba1bP05213 1700016P03Rik-201ENSMUST00000134252 863 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Tuba1bP05213 Drap1-210ENSMUST00000148219 727 ntTSL 3 BASIC11.35□□□□□ -0.59
Tuba1bP05213 Gm45784-201ENSMUST00000188360 142 ntBASIC11.35□□□□□ -0.59
Tuba1bP05213 1700094J05Rik-202ENSMUST00000190491 997 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Tuba1bP05213 Gm31728-201ENSMUST00000192164 435 ntTSL 3 BASIC11.35□□□□□ -0.59
Tuba1bP05213 Myl10-202ENSMUST00000196068 911 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Tuba1bP05213 Myl10-203ENSMUST00000196436 598 ntTSL 3 BASIC11.35□□□□□ -0.59
Tuba1bP05213 AC166349.1-201ENSMUST00000220866 695 ntBASIC11.35□□□□□ -0.59
Tuba1bP05213 Nkiras2-202ENSMUST00000051947 831 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Tuba1bP05213 B230118H07Rik-202ENSMUST00000099682 895 ntAPPRIS ALT2 TSL 5 BASIC11.35□□□□□ -0.59
Tuba1bP05213 Ifi35-201ENSMUST00000010502 1362 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Tuba1bP05213 Gatsl2-201ENSMUST00000016088 7367 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Tuba1bP05213 Krt17-201ENSMUST00000080893 1551 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Tuba1bP05213 Lrp1-202ENSMUST00000118455 2097 ntTSL 5 BASIC11.35□□□□□ -0.59
Tuba1bP05213 BC043934-202ENSMUST00000185694 2356 ntBASIC11.35□□□□□ -0.59
Tuba1bP05213 Mansc1-201ENSMUST00000047443 2376 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Tuba1bP05213 Ptcd3-201ENSMUST00000082094 2581 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Tuba1bP05213 Tubgcp2-201ENSMUST00000026547 2960 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Tuba1bP05213 Sertm1-201ENSMUST00000070342 3083 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Tuba1bP05213 Pcdha6-201ENSMUST00000193389 4653 ntAPPRIS ALT2 TSL 1 (best) BASIC11.35□□□□□ -0.59
Tuba1bP05213 Fuk-201ENSMUST00000041382 3838 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Tuba1bP05213 Fyb2-201ENSMUST00000106803 3136 ntAPPRIS P2 TSL 1 (best) BASIC11.35□□□□□ -0.59
Tuba1bP05213 Ttc4-201ENSMUST00000026480 2121 ntAPPRIS P2 TSL 1 (best) BASIC11.35□□□□□ -0.59
Tuba1bP05213 4933436I20Rik-202ENSMUST00000190615 1509 ntTSL 5 BASIC11.35□□□□□ -0.59
Tuba1bP05213 S100pbp-203ENSMUST00000106059 4084 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Tuba1bP05213 Cldn12-201ENSMUST00000060947 3597 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Tuba1bP05213 Ap3b2-205ENSMUST00000152355 3168 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Tuba1bP05213 Fry-201ENSMUST00000087204 10893 ntAPPRIS P1 TSL 5 BASIC11.34□□□□□ -0.59
Tuba1bP05213 Zc3h6-202ENSMUST00000110320 4916 ntAPPRIS P1 TSL 2 BASIC11.34□□□□□ -0.59
Tuba1bP05213 Plcd1-201ENSMUST00000010804 2657 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Tuba1bP05213 Mfap3l-203ENSMUST00000161421 4142 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Tuba1bP05213 Madd-207ENSMUST00000111369 5582 ntAPPRIS ALT2 TSL 5 BASIC11.34□□□□□ -0.59
Tuba1bP05213 Zdhhc20-205ENSMUST00000226057 2179 ntAPPRIS ALT2 BASIC11.34□□□□□ -0.59
Tuba1bP05213 Cnga4-202ENSMUST00000210344 1977 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Tuba1bP05213 Nrf1-207ENSMUST00000115206 1879 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Tuba1bP05213 Pla2g16-202ENSMUST00000136465 3048 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Tuba1bP05213 Sel1l-210ENSMUST00000178462 6150 ntTSL 5 BASIC11.34□□□□□ -0.59
Tuba1bP05213 Pcdh12-203ENSMUST00000194012 2702 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Tuba1bP05213 Chrdl1-204ENSMUST00000166406 2605 ntAPPRIS P3 TSL 1 (best) BASIC11.34□□□□□ -0.59
Tuba1bP05213 Slc25a22-203ENSMUST00000106007 2546 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Tuba1bP05213 C5ar1-202ENSMUST00000168818 2540 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Tuba1bP05213 Ptprh-201ENSMUST00000049113 3495 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Tuba1bP05213 Art3-206ENSMUST00000120416 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC11.34□□□□□ -0.59
Tuba1bP05213 Gm14660-201ENSMUST00000119809 575 ntBASIC11.34□□□□□ -0.59
Tuba1bP05213 Gm1335-201ENSMUST00000121653 386 ntBASIC11.34□□□□□ -0.59
Tuba1bP05213 Rdh18-ps-201ENSMUST00000137395 944 ntBASIC11.34□□□□□ -0.59
Tuba1bP05213 Rdh18-ps-202ENSMUST00000143917 953 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Tuba1bP05213 Gm2639-201ENSMUST00000156881 1297 ntBASIC11.34□□□□□ -0.59
Tuba1bP05213 Gm16315-201ENSMUST00000163009 783 ntTSL 3 BASIC11.34□□□□□ -0.59
Tuba1bP05213 Gm2824-203ENSMUST00000226189 1228 ntBASIC11.34□□□□□ -0.59
Tuba1bP05213 AC132317.1-201ENSMUST00000227227 962 ntBASIC11.34□□□□□ -0.59
Tuba1bP05213 Phyhipl-201ENSMUST00000046513 2877 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Tuba1bP05213 Hao1-201ENSMUST00000028704 2045 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Tuba1bP05213 Sorcs1-202ENSMUST00000111756 3617 ntAPPRIS ALT1 TSL 5 BASIC11.34□□□□□ -0.59
Tuba1bP05213 Sorcs1-207ENSMUST00000211008 3617 ntAPPRIS ALT1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Tuba1bP05213 A630075F10Rik-201ENSMUST00000180895 1913 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Retrieved 100 of 76,532 protein–RNA pairs in 79.6 ms