Protein–RNA interactions for Protein: O89116

Vti1a, Vesicle transport through interaction with t-SNAREs homolog 1A, mousemouse

Predictions only

Length 217 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vti1aO89116 Nhlh2-203ENSMUST00000198675 3943 ntAPPRIS P1 TSL 2 BASIC13.15□□□□□ -0.3
Vti1aO89116 Rita1-207ENSMUST00000177800 1668 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.31
Vti1aO89116 Ncln-201ENSMUST00000020463 3118 ntAPPRIS P2 TSL 1 (best) BASIC13.15□□□□□ -0.31
Vti1aO89116 Slc39a8-201ENSMUST00000029810 3203 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.31
Vti1aO89116 Gsdma2-201ENSMUST00000017355 1314 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Vti1aO89116 Gm17518-201ENSMUST00000181232 1346 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Vti1aO89116 Sec61g-203ENSMUST00000109643 1862 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Vti1aO89116 Nrf1-207ENSMUST00000115206 1879 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Vti1aO89116 Mfsd4a-204ENSMUST00000126927 2422 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Vti1aO89116 Bcl6-201ENSMUST00000023151 3525 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Vti1aO89116 Baiap3-202ENSMUST00000182056 4645 ntAPPRIS P2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Vti1aO89116 Crem-233ENSMUST00000154135 2530 ntTSL 5 BASIC13.14□□□□□ -0.31
Vti1aO89116 Gm9962-202ENSMUST00000186595 1417 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Vti1aO89116 Gnat2-201ENSMUST00000058669 2054 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Vti1aO89116 6030442K20Rik-201ENSMUST00000180835 1540 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Vti1aO89116 Eef1d-206ENSMUST00000109975 2842 ntTSL 5 BASIC13.14□□□□□ -0.31
Vti1aO89116 Gpr176-201ENSMUST00000039160 3899 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Vti1aO89116 Mmgt2-203ENSMUST00000129162 1828 ntAPPRIS P1 TSL 5 BASIC13.14□□□□□ -0.31
Vti1aO89116 Ppara-202ENSMUST00000109422 3413 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Vti1aO89116 Camta2-202ENSMUST00000100933 4383 ntAPPRIS ALT2 TSL 5 BASIC13.14□□□□□ -0.31
Vti1aO89116 Camta2-204ENSMUST00000108545 4377 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Vti1aO89116 Camta2-206ENSMUST00000120261 4398 ntTSL 5 BASIC13.14□□□□□ -0.31
Vti1aO89116 Ucp3-202ENSMUST00000107059 1260 ntAPPRIS P1 TSL 5 BASIC13.14□□□□□ -0.31
Vti1aO89116 Gm9062-201ENSMUST00000117712 727 ntBASIC13.14□□□□□ -0.31
Vti1aO89116 Gm12314-201ENSMUST00000118104 538 ntBASIC13.14□□□□□ -0.31
Vti1aO89116 Magohb-205ENSMUST00000173837 897 ntTSL 5 BASIC13.14□□□□□ -0.31
Vti1aO89116 Gm8546-201ENSMUST00000178288 1264 ntBASIC13.14□□□□□ -0.31
Vti1aO89116 Nkx2-2os-202ENSMUST00000184407 458 ntBASIC13.14□□□□□ -0.31
Vti1aO89116 Gm3508-201ENSMUST00000186012 792 ntBASIC13.14□□□□□ -0.31
Vti1aO89116 Ino80dos-202ENSMUST00000186436 652 ntTSL 5 BASIC13.14□□□□□ -0.31
Vti1aO89116 Gm9230-201ENSMUST00000188228 532 ntBASIC13.14□□□□□ -0.31
Vti1aO89116 Polr2i-201ENSMUST00000019882 819 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Vti1aO89116 D530033B14Rik-202ENSMUST00000206282 216 ntBASIC13.14□□□□□ -0.31
Vti1aO89116 Gm19187-201ENSMUST00000206781 892 ntBASIC13.14□□□□□ -0.31
Vti1aO89116 Gm44968-201ENSMUST00000207652 1171 ntTSL 5 BASIC13.14□□□□□ -0.31
Vti1aO89116 Gm39460-201ENSMUST00000215728 1266 ntTSL 5 BASIC13.14□□□□□ -0.31
Vti1aO89116 Spcs1-203ENSMUST00000226374 592 ntBASIC13.14□□□□□ -0.31
Vti1aO89116 Pebp4-201ENSMUST00000022678 1079 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Vti1aO89116 Cga-201ENSMUST00000029975 687 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Vti1aO89116 AF529169-201ENSMUST00000044491 7202 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Vti1aO89116 S100a1-201ENSMUST00000060738 677 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Vti1aO89116 4930564D02Rik-201ENSMUST00000070584 737 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Vti1aO89116 Olfr887-201ENSMUST00000074681 930 ntAPPRIS P1 BASIC13.14□□□□□ -0.31
Vti1aO89116 Krtap19-1-201ENSMUST00000081334 493 ntAPPRIS P1 BASIC13.14□□□□□ -0.31
Vti1aO89116 2610037D02Rik-201ENSMUST00000180852 2449 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Vti1aO89116 Camta1-201ENSMUST00000049790 8423 ntAPPRIS P2 TSL 5 BASIC13.14□□□□□ -0.31
Vti1aO89116 Car6-201ENSMUST00000030817 1567 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Vti1aO89116 Dnmt3l-201ENSMUST00000000746 1676 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Vti1aO89116 Rtn4-203ENSMUST00000102841 4060 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Vti1aO89116 Cdk5rap1-203ENSMUST00000109731 2160 ntAPPRIS P1 TSL 5 BASIC13.14□□□□□ -0.31
Vti1aO89116 Gfra1-201ENSMUST00000026076 4641 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Vti1aO89116 Tns2-202ENSMUST00000169627 4707 ntAPPRIS P2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Vti1aO89116 Lrfn3-201ENSMUST00000046351 2886 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Vti1aO89116 Ttbk2-203ENSMUST00000085840 11152 ntAPPRIS P1 TSL 5 BASIC13.13□□□□□ -0.31
Vti1aO89116 Limch1-204ENSMUST00000118242 5050 ntAPPRIS ALT2 TSL 5 BASIC13.13□□□□□ -0.31
Vti1aO89116 Togaram1-201ENSMUST00000066296 6372 ntAPPRIS P2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Vti1aO89116 Dcaf17-209ENSMUST00000154704 7739 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Vti1aO89116 Cacna2d1-203ENSMUST00000101581 3879 ntAPPRIS P2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Vti1aO89116 Cacna2d1-206ENSMUST00000180204 3882 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Vti1aO89116 Eif4enif1-213ENSMUST00000179770 3676 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Vti1aO89116 Phldb1-218ENSMUST00000156918 3485 ntTSL 5 BASIC13.13□□□□□ -0.31
Vti1aO89116 Slc25a25-205ENSMUST00000113310 3278 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Vti1aO89116 Zmym1-202ENSMUST00000106099 2982 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Vti1aO89116 Pde4d-205ENSMUST00000119507 2163 ntTSL 5 BASIC13.13□□□□□ -0.31
Vti1aO89116 Ripk3-201ENSMUST00000022830 1892 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Vti1aO89116 Trim50-202ENSMUST00000111180 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Vti1aO89116 Zfp157-203ENSMUST00000110912 886 ntTSL 3 BASIC13.13□□□□□ -0.31
Vti1aO89116 Hopx-202ENSMUST00000113453 1113 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Vti1aO89116 Gm15711-201ENSMUST00000118889 535 ntBASIC13.13□□□□□ -0.31
Vti1aO89116 Mettl1-202ENSMUST00000120542 1044 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Vti1aO89116 Gm13394-201ENSMUST00000121658 1000 ntBASIC13.13□□□□□ -0.31
Vti1aO89116 Gm14760-201ENSMUST00000121831 999 ntBASIC13.13□□□□□ -0.31
Vti1aO89116 Bcas3os2-201ENSMUST00000134305 661 ntTSL 5 BASIC13.13□□□□□ -0.31
Vti1aO89116 Tmem116-209ENSMUST00000156080 1184 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Vti1aO89116 Gm23699-201ENSMUST00000158835 135 ntBASIC13.13□□□□□ -0.31
Vti1aO89116 4732440D04Rik-202ENSMUST00000159618 413 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Vti1aO89116 Gm26953-204ENSMUST00000212526 553 ntTSL 5 BASIC13.13□□□□□ -0.31
Vti1aO89116 1700027J07Rik-202ENSMUST00000215747 1060 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Vti1aO89116 Gm29787-201ENSMUST00000222129 849 ntBASIC13.13□□□□□ -0.31
Vti1aO89116 Phpt1-201ENSMUST00000039156 937 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Vti1aO89116 Ttc17-202ENSMUST00000094801 3408 ntTSL 5 BASIC13.13□□□□□ -0.31
Vti1aO89116 Dnaja2-201ENSMUST00000034138 2919 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Vti1aO89116 Rxfp3-201ENSMUST00000058007 4275 ntAPPRIS P1 BASIC13.13□□□□□ -0.31
Vti1aO89116 Ank3-201ENSMUST00000047061 2517 ntTSL 5 BASIC13.13□□□□□ -0.31
Vti1aO89116 Rab11a-208ENSMUST00000172298 2336 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Vti1aO89116 Trmt1-204ENSMUST00000109768 2044 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Vti1aO89116 A730062M13Rik-201ENSMUST00000192843 1910 ntBASIC13.13□□□□□ -0.31
Vti1aO89116 Gm19385-201ENSMUST00000214714 1813 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Vti1aO89116 Mapk3-203ENSMUST00000091328 1716 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Vti1aO89116 Zfp961-202ENSMUST00000131237 2689 ntAPPRIS ALT2 TSL 3 BASIC13.13□□□□□ -0.31
Vti1aO89116 Tbc1d24-209ENSMUST00000201301 4261 ntTSL 5 BASIC13.13□□□□□ -0.31
Vti1aO89116 6030466F02Rik-201ENSMUST00000212339 1434 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Vti1aO89116 Tead3-207ENSMUST00000219703 1320 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Vti1aO89116 Orc2-201ENSMUST00000027198 3561 ntAPPRIS P4 TSL 1 (best) BASIC13.12□□□□□ -0.31
Vti1aO89116 Shisa9-201ENSMUST00000023138 4326 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Vti1aO89116 Brd2-202ENSMUST00000095347 2617 ntTSL 5 BASIC13.12□□□□□ -0.31
Vti1aO89116 Rapgef2-206ENSMUST00000195708 6964 ntAPPRIS P1 TSL 5 BASIC13.12□□□□□ -0.31
Vti1aO89116 Art3-201ENSMUST00000113083 1561 ntAPPRIS P3 TSL 5 BASIC13.12□□□□□ -0.31
Vti1aO89116 Adam12-201ENSMUST00000067680 7675 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Vti1aO89116 Carmil1-201ENSMUST00000072889 4988 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 47.3 ms