Protein–RNA interactions for Protein: O89079

Cope, Coatomer subunit epsilon, mousemouse

Predictions only

Length 308 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CopeO89079 Farsb-202ENSMUST00000170217 2036 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
CopeO89079 Zeb2-211ENSMUST00000153561 2070 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
CopeO89079 Tfcp2-201ENSMUST00000009877 3250 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
CopeO89079 Oasl1-201ENSMUST00000031540 2125 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
CopeO89079 Dnpep-202ENSMUST00000113605 1571 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.41
CopeO89079 Atp9a-201ENSMUST00000029060 3529 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
CopeO89079 Cd40-201ENSMUST00000017799 2986 ntAPPRIS P4 TSL 1 (best) BASIC12.51□□□□□ -0.41
CopeO89079 Il1rap-206ENSMUST00000174202 2306 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
CopeO89079 1700110I01Rik-201ENSMUST00000112775 1671 ntTSL 5 BASIC12.51□□□□□ -0.41
CopeO89079 Odf2-201ENSMUST00000028128 2376 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
CopeO89079 Pax7-202ENSMUST00000174681 1725 ntAPPRIS ALT1 TSL 5 BASIC12.51□□□□□ -0.41
CopeO89079 H2-T22-203ENSMUST00000080015 1761 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
CopeO89079 Cog4-201ENSMUST00000034203 2737 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
CopeO89079 Als2cl-201ENSMUST00000084926 5079 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
CopeO89079 Ighv1-80-201ENSMUST00000103547 351 ntAPPRIS P1 BASIC12.51□□□□□ -0.41
CopeO89079 Eaf2-204ENSMUST00000114829 1030 ntAPPRIS P2 TSL 1 (best) BASIC12.51□□□□□ -0.41
CopeO89079 Car15-201ENSMUST00000118960 1283 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
CopeO89079 Gm15806-201ENSMUST00000120696 955 ntBASIC12.51□□□□□ -0.41
CopeO89079 Mpc1-202ENSMUST00000124023 555 ntTSL 2 BASIC12.51□□□□□ -0.41
CopeO89079 Cd209g-201ENSMUST00000130372 1169 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
CopeO89079 2010320O07Rik-201ENSMUST00000160935 525 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
CopeO89079 Gm29649-201ENSMUST00000185649 419 ntBASIC12.51□□□□□ -0.41
CopeO89079 Ovol3-201ENSMUST00000189482 731 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
CopeO89079 Gm34866-201ENSMUST00000196146 515 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
CopeO89079 Gm18584-201ENSMUST00000203098 964 ntBASIC12.51□□□□□ -0.41
CopeO89079 Dhrs4-202ENSMUST00000226168 828 ntBASIC12.51□□□□□ -0.41
CopeO89079 Cd37-201ENSMUST00000033063 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
CopeO89079 Cd37-202ENSMUST00000098461 1227 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
CopeO89079 Gm43760-201ENSMUST00000202120 3015 ntBASIC12.51□□□□□ -0.41
CopeO89079 Aldh3a2-202ENSMUST00000074127 3091 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
CopeO89079 Gm5106-201ENSMUST00000181058 1334 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
CopeO89079 Grap2-201ENSMUST00000043149 3158 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
CopeO89079 BC003331-203ENSMUST00000097546 3174 ntAPPRIS ALT2 TSL 5 BASIC12.51□□□□□ -0.41
CopeO89079 Gm37513-201ENSMUST00000194830 2268 ntBASIC12.51□□□□□ -0.41
CopeO89079 Gm38378-201ENSMUST00000195153 2268 ntBASIC12.51□□□□□ -0.41
CopeO89079 Tmem159-202ENSMUST00000118737 1395 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
CopeO89079 Rprd1b-203ENSMUST00000109518 4399 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
CopeO89079 Prss30-201ENSMUST00000024936 1470 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
CopeO89079 Gm45776-201ENSMUST00000212366 1522 ntBASIC12.51□□□□□ -0.41
CopeO89079 Fbxo44-208ENSMUST00000167160 1572 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
CopeO89079 Neu2-201ENSMUST00000070898 1570 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
CopeO89079 Spata18-203ENSMUST00000113548 1623 ntAPPRIS ALT2 TSL 5 BASIC12.51□□□□□ -0.41
CopeO89079 Aire-216ENSMUST00000156417 1627 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
CopeO89079 Hbs1l-201ENSMUST00000020153 2793 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
CopeO89079 Tctn3-203ENSMUST00000135795 1686 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
CopeO89079 Gripap1-202ENSMUST00000101694 2867 ntAPPRIS ALT2 TSL 5 BASIC12.51□□□□□ -0.41
CopeO89079 Cluap1-201ENSMUST00000040881 1779 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
CopeO89079 Pdlim5-206ENSMUST00000195975 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
CopeO89079 Tiprl-201ENSMUST00000043235 4380 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
CopeO89079 Gm10432-202ENSMUST00000223300 4791 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
CopeO89079 Tkfc-201ENSMUST00000037678 2253 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
CopeO89079 Clec10a-209ENSMUST00000178945 2332 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
CopeO89079 Mgmt-201ENSMUST00000081510 2894 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
CopeO89079 Chd5-201ENSMUST00000005175 9122 ntAPPRIS ALT2 TSL 5 BASIC12.5□□□□□ -0.41
CopeO89079 Rbm47-209ENSMUST00000201544 5211 ntAPPRIS P3 TSL 5 BASIC12.5□□□□□ -0.41
CopeO89079 Maip1-201ENSMUST00000027114 3540 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
CopeO89079 E130114P18Rik-202ENSMUST00000107068 1132 ntAPPRIS P5 TSL 3 BASIC12.5□□□□□ -0.41
CopeO89079 Igdcc4-203ENSMUST00000166273 778 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
CopeO89079 Gm45184-201ENSMUST00000206354 955 ntTSL 5 BASIC12.5□□□□□ -0.41
CopeO89079 H1foo-201ENSMUST00000037831 1113 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
CopeO89079 Wdr74-201ENSMUST00000049424 1204 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
CopeO89079 Gm6091-201ENSMUST00000098307 165 ntBASIC12.5□□□□□ -0.41
CopeO89079 Phf24-202ENSMUST00000107975 6494 ntAPPRIS P1 TSL 2 BASIC12.5□□□□□ -0.41
CopeO89079 Ntpcr-202ENSMUST00000065135 1497 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
CopeO89079 Fam110a-203ENSMUST00000109864 1591 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
CopeO89079 Gm13075-202ENSMUST00000149247 1621 ntTSL 5 BASIC12.5□□□□□ -0.41
CopeO89079 Neil1-202ENSMUST00000186410 1601 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
CopeO89079 Hs3st1-202ENSMUST00000117944 1686 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
CopeO89079 Hrg-201ENSMUST00000023590 1734 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
CopeO89079 Accs-202ENSMUST00000068513 1872 ntAPPRIS P3 TSL 5 BASIC12.5□□□□□ -0.41
CopeO89079 Spata7-203ENSMUST00000101146 1913 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
CopeO89079 Gm8522-201ENSMUST00000118416 1929 ntBASIC12.5□□□□□ -0.41
CopeO89079 N4bp2l1-201ENSMUST00000016279 1905 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
CopeO89079 Cyth3-201ENSMUST00000110727 2068 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
CopeO89079 Vmn1r193-202ENSMUST00000227457 6429 ntAPPRIS P1 BASIC12.5□□□□□ -0.41
CopeO89079 Slc22a4-201ENSMUST00000020586 2263 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
CopeO89079 Gstt2-208ENSMUST00000220440 2254 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
CopeO89079 Sec14l5-201ENSMUST00000165810 2337 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
CopeO89079 Tcf25-202ENSMUST00000108840 2582 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
CopeO89079 Trmt61b-202ENSMUST00000137830 2572 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
CopeO89079 Gfap-201ENSMUST00000067444 2648 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
CopeO89079 Slco3a1-202ENSMUST00000098371 2709 ntAPPRIS ALT1 TSL 1 (best) BASIC12.5□□□□□ -0.41
CopeO89079 3110062M04Rik-203ENSMUST00000115007 3326 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
CopeO89079 Gnb1l-204ENSMUST00000115601 3507 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
CopeO89079 Pigo-201ENSMUST00000067481 3525 ntAPPRIS ALT2 TSL 5 BASIC12.5□□□□□ -0.41
CopeO89079 Gnb1l-202ENSMUST00000090086 3549 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
CopeO89079 Clec16a-201ENSMUST00000038145 3730 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
CopeO89079 Nras-201ENSMUST00000029445 4470 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
CopeO89079 Bod1l-204ENSMUST00000202908 10399 ntAPPRIS ALT2 TSL 5 BASIC12.5□□□□□ -0.41
CopeO89079 Setx-201ENSMUST00000061578 10970 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
CopeO89079 E2f3-201ENSMUST00000102948 5097 ntAPPRIS P2 TSL 1 (best) BASIC12.49□□□□□ -0.41
CopeO89079 Magel2-201ENSMUST00000080403 4631 ntAPPRIS P1 BASIC12.49□□□□□ -0.41
CopeO89079 Gucy2e-203ENSMUST00000108665 3645 ntAPPRIS P1 TSL 5 BASIC12.49□□□□□ -0.41
CopeO89079 Lbr-201ENSMUST00000005003 3510 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
CopeO89079 Scmh1-201ENSMUST00000000087 3353 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
CopeO89079 Adgre5-208ENSMUST00000166939 2980 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
CopeO89079 Adgre5-201ENSMUST00000002964 2986 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
CopeO89079 Arhgap1-204ENSMUST00000111331 2883 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
CopeO89079 Polr1b-201ENSMUST00000028874 2769 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
CopeO89079 Arfgap1-201ENSMUST00000029092 2714 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 42.1 ms